Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07485

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
1,886,463	+		CA265_RS07475	0.30	-0.8
1,886,464	-		CA265_RS07475	0.30	+0.8
1,886,466	-		CA265_RS07475	0.31	-0.3
1,886,514	-		CA265_RS07475	0.37	+1.2
1,886,601	-		CA265_RS07475	0.49	+0.4
1,886,637	-		CA265_RS07475	0.54	-0.0
1,886,702	+		CA265_RS07475	0.63	-2.6
1,886,772	-		CA265_RS07475	0.73	-0.9
1,886,841	+		CA265_RS07475	0.82	+2.0
1,886,871	+		CA265_RS07475	0.86	+0.5
1,886,891	+		CA265_RS07475	0.89	+1.0
1,886,942	+				-0.0
1,886,957	+				+0.8
1,886,965	+				-0.4
1,886,965	+				-0.1
1,887,263	+				-2.0
1,887,269	+				+0.1
1,887,358	-				+0.2
1,887,424	+				-0.5
1,887,455	+				-0.1
1,887,474	+		CA265_RS07485	0.12	-0.7
1,887,475	-		CA265_RS07485	0.12	-0.1
1,887,477	+		CA265_RS07485	0.13	+0.3
1,887,478	-		CA265_RS07485	0.13	+0.7
1,887,540	+		CA265_RS07485	0.21	-0.6
1,887,545	+		CA265_RS07485	0.21	-0.8
1,887,558	+		CA265_RS07485	0.23	+0.4
1,887,578	-		CA265_RS07485	0.26	+0.7
1,887,637	-		CA265_RS07485	0.34	-2.0
1,887,700	-		CA265_RS07485	0.42	+0.4
1,887,705	-		CA265_RS07485	0.43	+0.8
1,887,716	+		CA265_RS07485	0.44	-0.2
1,887,770	+		CA265_RS07485	0.51	+1.0
1,887,785	+		CA265_RS07485	0.53	+0.1
1,887,785	+		CA265_RS07485	0.53	+1.0
1,887,804	+		CA265_RS07485	0.56	+1.7
1,887,805	-		CA265_RS07485	0.56	+0.8
1,887,868	-		CA265_RS07485	0.64	-0.1
1,887,880	-		CA265_RS07485	0.66	-0.1
1,887,884	+		CA265_RS07485	0.66	+1.3
1,887,908	+		CA265_RS07485	0.69	-0.8
1,887,908	+		CA265_RS07485	0.69	+2.2
1,887,908	+		CA265_RS07485	0.69	-0.4
1,887,908	+		CA265_RS07485	0.69	+0.4
1,887,970	-		CA265_RS07485	0.77	+1.5
1,887,999	+		CA265_RS07485	0.81	+0.7
1,888,000	-		CA265_RS07485	0.81	-0.0
1,888,025	+		CA265_RS07485	0.85	+1.0
1,888,025	+		CA265_RS07485	0.85	+0.2
1,888,062	-		CA265_RS07485	0.90	+0.5
1,888,065	+				+1.0
1,888,083	-				-1.3
1,888,110	+				+0.6
1,888,153	-				-0.5
1,888,287	+		CA265_RS07490	0.13	+1.2
1,888,345	+		CA265_RS07490	0.23	+0.4
1,888,345	+		CA265_RS07490	0.23	+1.1
1,888,361	+		CA265_RS07490	0.26	+0.8
1,888,413	-		CA265_RS07490	0.36	+1.1
1,888,413	-		CA265_RS07490	0.36	+1.3
1,888,413	-		CA265_RS07490	0.36	+0.4
1,888,413	-		CA265_RS07490	0.36	+1.6
1,888,644	-		CA265_RS07490	0.78	-0.4
1,888,664	-		CA265_RS07490	0.81	-0.3
1,888,671	+		CA265_RS07490	0.83	+2.0
1,888,692	+		CA265_RS07490	0.86	+0.7
1,888,692	+		CA265_RS07490	0.86	+0.4
1,888,693	-		CA265_RS07490	0.87	+0.3
1,888,693	-		CA265_RS07490	0.87	+0.4
1,888,696	+		CA265_RS07490	0.87	+0.7
1,888,768	-				+0.9
1,888,807	+				+0.0
1,888,822	+				+0.3
1,888,836	+				+0.3