Experiment: Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4989 and Ac3H11_4990 are separated by 218 nucleotides Ac3H11_4990 and Ac3H11_4991 are separated by 16 nucleotides Ac3H11_4991 and Ac3H11_4992 are separated by 78 nucleotides
Ac3H11_4989 - Enoyl-CoA hydratase (EC 4.2.1.17), at 153,836 to 154,636
_4989
Ac3H11_4990 - Pirin, at 154,855 to 155,604
_4990
Ac3H11_4991 - Cation transport protein chaC, at 155,621 to 156,364
_4991
Ac3H11_4992 - hypothetical protein, at 156,443 to 158,449
_4992
Position (kb) 154
155
156 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 154.214 kb on + strand, within Ac3H11_4989 at 154.214 kb on + strand, within Ac3H11_4989 at 154.214 kb on + strand, within Ac3H11_4989 at 154.215 kb on - strand, within Ac3H11_4989 at 154.253 kb on + strand, within Ac3H11_4989 at 154.253 kb on + strand, within Ac3H11_4989 at 154.254 kb on - strand, within Ac3H11_4989 at 154.254 kb on - strand, within Ac3H11_4989 at 154.472 kb on + strand, within Ac3H11_4989 at 154.726 kb on - strand at 154.790 kb on + strand at 154.790 kb on + strand at 154.791 kb on - strand at 154.791 kb on - strand at 154.791 kb on - strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.939 kb on + strand, within Ac3H11_4990 at 154.940 kb on - strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.284 kb on + strand, within Ac3H11_4990 at 155.284 kb on + strand, within Ac3H11_4990 at 155.284 kb on + strand, within Ac3H11_4990 at 155.285 kb on - strand, within Ac3H11_4990 at 155.285 kb on - strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.603 kb on - strand at 155.852 kb on + strand, within Ac3H11_4991 at 155.852 kb on + strand, within Ac3H11_4991 at 155.852 kb on + strand, within Ac3H11_4991 at 155.853 kb on - strand, within Ac3H11_4991 at 155.853 kb on - strand, within Ac3H11_4991 at 155.853 kb on - strand, within Ac3H11_4991 at 156.102 kb on - strand, within Ac3H11_4991 at 156.102 kb on - strand, within Ac3H11_4991 at 156.102 kb on - strand, within Ac3H11_4991 at 156.263 kb on + strand, within Ac3H11_4991 at 156.264 kb on - strand, within Ac3H11_4991 at 156.264 kb on - strand, within Ac3H11_4991 at 156.264 kb on - strand, within Ac3H11_4991 at 156.264 kb on - strand, within Ac3H11_4991 at 156.314 kb on + strand at 156.314 kb on + strand at 156.314 kb on + strand at 156.314 kb on + strand at 156.314 kb on + strand at 156.314 kb on + strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.315 kb on - strand at 156.327 kb on + strand at 156.327 kb on + strand at 156.327 kb on + strand at 156.328 kb on - strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.329 kb on + strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.330 kb on - strand at 156.365 kb on + strand at 156.365 kb on + strand at 156.399 kb on + strand at 156.400 kb on - strand at 156.400 kb on - strand at 156.400 kb on - strand at 156.491 kb on + strand at 156.491 kb on + strand at 156.491 kb on + strand at 156.491 kb on + strand at 156.492 kb on - strand at 156.492 kb on - strand at 156.492 kb on - strand at 156.530 kb on + strand at 156.530 kb on + strand at 156.530 kb on + strand at 156.530 kb on + strand at 156.531 kb on - strand at 156.531 kb on - strand at 156.531 kb on - strand at 156.531 kb on - strand at 156.531 kb on - strand at 156.531 kb on - strand at 156.604 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0001 mg/ml remove 154,214 + Ac3H11_4989 0.47 -0.4 154,214 + Ac3H11_4989 0.47 +0.2 154,214 + Ac3H11_4989 0.47 -0.7 154,215 - Ac3H11_4989 0.47 +0.7 154,253 + Ac3H11_4989 0.52 -0.1 154,253 + Ac3H11_4989 0.52 -1.9 154,254 - Ac3H11_4989 0.52 -0.8 154,254 - Ac3H11_4989 0.52 +1.2 154,472 + Ac3H11_4989 0.79 -0.5 154,726 - +0.8 154,790 + +1.8 154,790 + -0.2 154,791 - +0.0 154,791 - -1.4 154,791 - +1.1 154,799 + -0.2 154,799 + -0.8 154,799 + +0.6 154,799 + -2.8 154,799 + -0.3 154,799 + +0.8 154,799 + -0.6 154,799 + -1.0 154,799 + +0.7 154,800 - -0.7 154,800 - +0.5 154,800 - +1.5 154,800 - -0.8 154,800 - +1.1 154,800 - +0.2 154,800 - -1.3 154,939 + Ac3H11_4990 0.11 -0.9 154,940 - Ac3H11_4990 0.11 +0.4 155,053 + Ac3H11_4990 0.26 +0.5 155,053 + Ac3H11_4990 0.26 +0.4 155,053 + Ac3H11_4990 0.26 -0.5 155,053 + Ac3H11_4990 0.26 -0.6 155,053 + Ac3H11_4990 0.26 -0.1 155,053 + Ac3H11_4990 0.26 +0.2 155,053 + Ac3H11_4990 0.26 +0.7 155,053 + Ac3H11_4990 0.26 +0.5 155,053 + Ac3H11_4990 0.26 -1.0 155,053 + Ac3H11_4990 0.26 -0.5 155,053 + Ac3H11_4990 0.26 -1.9 155,054 - Ac3H11_4990 0.27 +0.2 155,054 - Ac3H11_4990 0.27 -0.3 155,054 - Ac3H11_4990 0.27 -1.1 155,054 - Ac3H11_4990 0.27 -0.3 155,054 - Ac3H11_4990 0.27 +1.1 155,054 - Ac3H11_4990 0.27 -1.6 155,054 - Ac3H11_4990 0.27 +0.2 155,054 - Ac3H11_4990 0.27 -1.2 155,054 - Ac3H11_4990 0.27 -1.2 155,054 - Ac3H11_4990 0.27 -1.7 155,054 - Ac3H11_4990 0.27 -3.3 155,284 + Ac3H11_4990 0.57 -0.8 155,284 + Ac3H11_4990 0.57 -0.4 155,284 + Ac3H11_4990 0.57 +0.6 155,285 - Ac3H11_4990 0.57 +0.2 155,285 - Ac3H11_4990 0.57 -0.2 155,458 + Ac3H11_4990 0.80 -1.0 155,458 + Ac3H11_4990 0.80 -2.7 155,458 + Ac3H11_4990 0.80 +0.2 155,458 + Ac3H11_4990 0.80 -0.4 155,458 + Ac3H11_4990 0.80 +0.3 155,458 + Ac3H11_4990 0.80 -0.1 155,458 + Ac3H11_4990 0.80 +0.3 155,458 + Ac3H11_4990 0.80 -0.3 155,458 + Ac3H11_4990 0.80 -0.2 155,458 + Ac3H11_4990 0.80 +1.5 155,459 - Ac3H11_4990 0.81 -1.7 155,459 - Ac3H11_4990 0.81 -0.1 155,459 - Ac3H11_4990 0.81 +0.4 155,459 - Ac3H11_4990 0.81 -0.3 155,459 - Ac3H11_4990 0.81 +0.8 155,459 - Ac3H11_4990 0.81 +0.1 155,459 - Ac3H11_4990 0.81 -0.1 155,459 - Ac3H11_4990 0.81 +0.9 155,459 - Ac3H11_4990 0.81 +0.9 155,603 - +0.4 155,852 + Ac3H11_4991 0.31 -0.2 155,852 + Ac3H11_4991 0.31 -0.5 155,852 + Ac3H11_4991 0.31 -0.4 155,853 - Ac3H11_4991 0.31 -0.8 155,853 - Ac3H11_4991 0.31 +0.8 155,853 - Ac3H11_4991 0.31 -0.4 156,102 - Ac3H11_4991 0.65 +1.3 156,102 - Ac3H11_4991 0.65 -0.1 156,102 - Ac3H11_4991 0.65 -0.4 156,263 + Ac3H11_4991 0.86 -0.6 156,264 - Ac3H11_4991 0.86 +0.4 156,264 - Ac3H11_4991 0.86 -0.4 156,264 - Ac3H11_4991 0.86 -1.3 156,264 - Ac3H11_4991 0.86 -0.1 156,314 + -0.1 156,314 + -0.5 156,314 + +0.4 156,314 + -0.5 156,314 + -0.3 156,314 + -0.6 156,315 - -0.4 156,315 - +0.0 156,315 - -0.9 156,315 - -0.6 156,315 - -0.1 156,315 - -0.6 156,315 - +0.1 156,315 - +0.1 156,315 - -0.2 156,315 - -0.9 156,315 - -1.5 156,315 - -0.2 156,315 - -1.3 156,315 - +0.2 156,315 - -0.8 156,327 + +0.6 156,327 + -0.3 156,327 + -0.4 156,328 - +0.8 156,329 + -3.7 156,329 + -0.6 156,329 + -2.2 156,329 + -1.1 156,329 + -0.1 156,329 + +0.8 156,329 + -1.7 156,329 + -0.7 156,329 + +0.1 156,329 + -0.3 156,329 + -1.8 156,329 + -1.7 156,329 + -1.5 156,329 + -0.6 156,330 - +1.1 156,330 - +1.3 156,330 - +0.4 156,330 - +0.2 156,330 - +0.3 156,330 - -0.7 156,330 - -1.2 156,330 - -0.5 156,330 - +2.0 156,330 - -0.3 156,330 - -1.1 156,330 - -0.1 156,330 - +0.6 156,330 - -0.8 156,330 - -0.1 156,330 - +1.3 156,330 - -0.5 156,330 - -1.5 156,330 - +0.8 156,365 + -1.1 156,365 + +0.9 156,399 + -0.7 156,400 - +0.4 156,400 - +0.1 156,400 - +0.4 156,491 + -1.7 156,491 + +0.8 156,491 + -1.2 156,491 + -0.4 156,492 - +1.3 156,492 - +0.9 156,492 - +3.2 156,530 + -0.3 156,530 + +0.8 156,530 + -1.5 156,530 + +0.7 156,531 - -1.4 156,531 - -0.9 156,531 - -0.9 156,531 - +1.2 156,531 - +0.5 156,531 - -1.5 156,604 + +0.9
Or see this region's nucleotide sequence