Experiment: Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3571 and Ac3H11_3572 overlap by 4 nucleotides Ac3H11_3572 and Ac3H11_3573 overlap by 4 nucleotides Ac3H11_3573 and Ac3H11_3574 are separated by 9 nucleotides Ac3H11_3574 and Ac3H11_3575 are separated by 88 nucleotides
Ac3H11_3571 - ABC-type tungstate transport system, permease protein, at 126,459 to 127,196
_3571
Ac3H11_3572 - ABC-type tungstate transport system, ATP-binding protein, at 127,193 to 127,921
_3572
Ac3H11_3573 - ABC-type tungstate transport system, periplasmic binding protein, at 127,918 to 128,757
_3573
Ac3H11_3574 - Molybdenum-binding periplasmic protein, at 128,767 to 129,591
_3574
Ac3H11_3575 - Ubiquinone biosynthesis monooxygenase UbiB, at 129,680 to 131,380
_3575
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1 at 127.817 kb on + strand, within Ac3H11_3572 at 128.254 kb on + strand, within Ac3H11_3573 at 128.254 kb on + strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573 at 129.221 kb on - strand, within Ac3H11_3574 at 129.268 kb on + strand, within Ac3H11_3574 at 129.269 kb on - strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.347 kb on - strand, within Ac3H11_3574 at 129.391 kb on + strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.479 kb on - strand, within Ac3H11_3574
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0001 mg/ml remove 127,817 + Ac3H11_3572 0.86 +1.5 128,254 + Ac3H11_3573 0.40 +0.8 128,254 + Ac3H11_3573 0.40 +0.8 128,255 - Ac3H11_3573 0.40 -0.1 128,255 - Ac3H11_3573 0.40 -0.6 128,255 - Ac3H11_3573 0.40 +0.0 128,506 + Ac3H11_3573 0.70 +0.6 128,506 + Ac3H11_3573 0.70 +0.8 129,221 - Ac3H11_3574 0.55 -0.2 129,268 + Ac3H11_3574 0.61 -0.4 129,269 - Ac3H11_3574 0.61 -0.6 129,346 + Ac3H11_3574 0.70 +0.5 129,346 + Ac3H11_3574 0.70 +0.8 129,346 + Ac3H11_3574 0.70 +0.0 129,346 + Ac3H11_3574 0.70 +0.7 129,347 - Ac3H11_3574 0.70 +0.2 129,391 + Ac3H11_3574 0.76 +0.0 129,392 - Ac3H11_3574 0.76 +0.3 129,392 - Ac3H11_3574 0.76 +0.9 129,392 - Ac3H11_3574 0.76 +0.2 129,479 - Ac3H11_3574 0.86 +0.9
Or see this region's nucleotide sequence