Experiment: Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3359 and Ac3H11_3360 are separated by 652 nucleotides
Ac3H11_3359 - response regulatory protein, at 42,152 to 42,793
_3359
Ac3H11_3360 - Response regulator receiver:Transcriptional regulatory protein, C terminal, at 43,446 to 44,168
_3360
Position (kb) 42
43 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 41.195 kb on - strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.312 kb on + strand at 41.313 kb on - strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.424 kb on + strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.425 kb on - strand at 41.540 kb on + strand at 41.540 kb on + strand at 41.541 kb on - strand at 41.541 kb on - strand at 41.541 kb on - strand at 41.541 kb on - strand at 41.546 kb on + strand at 41.546 kb on + strand at 41.546 kb on + strand at 41.546 kb on + strand at 41.546 kb on + strand at 41.546 kb on + strand at 41.546 kb on + strand at 41.547 kb on - strand at 41.547 kb on - strand at 41.547 kb on - strand at 41.547 kb on - strand at 41.567 kb on + strand at 41.645 kb on + strand at 41.645 kb on + strand at 41.646 kb on - strand at 41.732 kb on - strand at 41.732 kb on - strand at 41.978 kb on + strand at 42.047 kb on + strand at 42.153 kb on + strand at 42.153 kb on + strand at 42.154 kb on - strand at 42.154 kb on - strand at 42.180 kb on + strand at 42.180 kb on + strand at 42.180 kb on + strand at 42.180 kb on + strand at 42.180 kb on + strand at 42.180 kb on + strand at 42.180 kb on + strand at 42.181 kb on - strand at 42.181 kb on - strand at 42.181 kb on - strand at 42.181 kb on - strand at 42.181 kb on - strand at 42.219 kb on + strand, within Ac3H11_3359 at 42.219 kb on + strand, within Ac3H11_3359 at 42.219 kb on + strand, within Ac3H11_3359 at 42.219 kb on + strand, within Ac3H11_3359 at 42.219 kb on + strand, within Ac3H11_3359 at 42.219 kb on + strand, within Ac3H11_3359 at 42.219 kb on + strand, within Ac3H11_3359 at 42.220 kb on - strand, within Ac3H11_3359 at 42.247 kb on + strand, within Ac3H11_3359 at 42.248 kb on - strand, within Ac3H11_3359 at 42.285 kb on + strand, within Ac3H11_3359 at 42.285 kb on + strand, within Ac3H11_3359 at 42.285 kb on + strand, within Ac3H11_3359 at 42.286 kb on - strand, within Ac3H11_3359 at 42.291 kb on + strand, within Ac3H11_3359 at 42.291 kb on + strand, within Ac3H11_3359 at 42.702 kb on + strand, within Ac3H11_3359 at 42.703 kb on - strand, within Ac3H11_3359 at 42.862 kb on + strand at 42.862 kb on + strand at 42.862 kb on + strand at 42.862 kb on + strand at 42.863 kb on - strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.988 kb on - strand at 42.988 kb on - strand at 42.988 kb on - strand at 42.988 kb on - strand at 42.999 kb on + strand at 43.069 kb on + strand at 43.070 kb on - strand at 43.157 kb on + strand at 43.158 kb on - strand at 43.187 kb on - strand at 43.187 kb on - strand at 43.187 kb on - strand at 43.298 kb on + strand at 43.299 kb on - strand at 43.300 kb on + strand at 43.347 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.419 kb on - strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.506 kb on + strand at 43.507 kb on - strand at 43.507 kb on - strand at 43.764 kb on + strand, within Ac3H11_3360 at 43.765 kb on - strand, within Ac3H11_3360
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0001 mg/ml remove 41,195 - -0.3 41,243 + +0.3 41,243 + +1.5 41,243 + -1.1 41,243 + -1.0 41,243 + -0.5 41,243 + +0.8 41,244 - +1.8 41,244 - +0.8 41,244 - -0.5 41,244 - -0.2 41,244 - -1.0 41,244 - +0.0 41,312 + -0.3 41,313 - -0.3 41,424 + +0.9 41,424 + -1.7 41,424 + -1.3 41,424 + -0.5 41,424 + +1.2 41,424 + +1.9 41,424 + +1.4 41,424 + +0.4 41,424 + -1.3 41,424 + -1.3 41,424 + -0.4 41,425 - +0.6 41,425 - +0.1 41,425 - -0.9 41,425 - -0.1 41,425 - +0.8 41,425 - +0.5 41,425 - -2.1 41,425 - -0.5 41,425 - -0.2 41,425 - +0.9 41,425 - -0.4 41,425 - -0.2 41,540 + +0.4 41,540 + +0.1 41,541 - +0.6 41,541 - +0.3 41,541 - +0.5 41,541 - +1.4 41,546 + -0.5 41,546 + -2.5 41,546 + -0.7 41,546 + +0.4 41,546 + -0.1 41,546 + +1.0 41,546 + -0.4 41,547 - -1.4 41,547 - +1.1 41,547 - -0.5 41,547 - -0.6 41,567 + +0.6 41,645 + +0.4 41,645 + -0.7 41,646 - -0.1 41,732 - +0.5 41,732 - +0.9 41,978 + -1.2 42,047 + -1.9 42,153 + -0.7 42,153 + +0.5 42,154 - -0.3 42,154 - -2.2 42,180 + +0.9 42,180 + +0.8 42,180 + +2.0 42,180 + +0.9 42,180 + +0.7 42,180 + -0.8 42,180 + -0.1 42,181 - +0.2 42,181 - +0.4 42,181 - -0.8 42,181 - -0.6 42,181 - -0.1 42,219 + Ac3H11_3359 0.10 -0.8 42,219 + Ac3H11_3359 0.10 +0.6 42,219 + Ac3H11_3359 0.10 +0.4 42,219 + Ac3H11_3359 0.10 -0.3 42,219 + Ac3H11_3359 0.10 +0.6 42,219 + Ac3H11_3359 0.10 +1.2 42,219 + Ac3H11_3359 0.10 +1.3 42,220 - Ac3H11_3359 0.11 -2.5 42,247 + Ac3H11_3359 0.15 -0.3 42,248 - Ac3H11_3359 0.15 +0.3 42,285 + Ac3H11_3359 0.21 -1.6 42,285 + Ac3H11_3359 0.21 +0.2 42,285 + Ac3H11_3359 0.21 -0.4 42,286 - Ac3H11_3359 0.21 -0.1 42,291 + Ac3H11_3359 0.22 +0.1 42,291 + Ac3H11_3359 0.22 -1.0 42,702 + Ac3H11_3359 0.86 +1.0 42,703 - Ac3H11_3359 0.86 +1.1 42,862 + -1.6 42,862 + -3.5 42,862 + +1.2 42,862 + +2.7 42,863 - -0.2 42,987 + -0.4 42,987 + -0.2 42,987 + -0.4 42,987 + +1.2 42,987 + -1.1 42,987 + +0.2 42,987 + -0.2 42,988 - +0.8 42,988 - -1.1 42,988 - -0.4 42,988 - -1.3 42,999 + -0.5 43,069 + -0.3 43,070 - +0.0 43,157 + +0.1 43,158 - +0.4 43,187 - +0.1 43,187 - -0.0 43,187 - +0.8 43,298 + +0.5 43,299 - +1.6 43,300 + -0.2 43,347 + +0.5 43,418 + -1.9 43,418 + +2.0 43,418 + +0.3 43,418 + +1.0 43,418 + -1.3 43,418 + -1.2 43,419 - +0.9 43,434 + -2.0 43,434 + +0.8 43,434 + -0.7 43,434 + +0.6 43,434 + +1.2 43,435 - -0.9 43,435 - +0.2 43,435 - -0.8 43,435 - +0.5 43,435 - +0.5 43,435 - +0.5 43,435 - -0.2 43,506 + +0.4 43,507 - -1.0 43,507 - +0.8 43,764 + Ac3H11_3360 0.44 -0.2 43,765 - Ac3H11_3360 0.44 -0.1
Or see this region's nucleotide sequence