Experiment: Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_279 and Ac3H11_280 are separated by 123 nucleotides Ac3H11_280 and Ac3H11_281 are separated by 264 nucleotides Ac3H11_281 and Ac3H11_282 are separated by 13 nucleotides
Ac3H11_279 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 103,705 to 104,502
_279
Ac3H11_280 - hypothetical protein, at 104,626 to 104,910
_280
Ac3H11_281 - FIG00932369: hypothetical protein, at 105,175 to 105,696
_281
Ac3H11_282 - FIG074102: hypothetical protein, at 105,710 to 106,882
_282
Position (kb) 104
105 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 103.672 kb on - strand at 103.934 kb on - strand, within Ac3H11_279 at 104.275 kb on + strand, within Ac3H11_279 at 104.276 kb on - strand, within Ac3H11_279 at 104.276 kb on - strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.627 kb on + strand at 104.628 kb on - strand at 104.978 kb on + strand at 104.979 kb on - strand at 104.979 kb on - strand at 105.030 kb on - strand at 105.031 kb on + strand at 105.032 kb on - strand at 105.048 kb on + strand at 105.048 kb on + strand at 105.056 kb on - strand at 105.056 kb on - strand at 105.074 kb on - strand at 105.074 kb on - strand at 105.074 kb on - strand at 105.074 kb on - strand at 105.176 kb on + strand at 105.177 kb on - strand at 105.177 kb on - strand at 105.177 kb on - strand at 105.177 kb on - strand at 105.177 kb on - strand at 105.449 kb on + strand, within Ac3H11_281 at 105.449 kb on + strand, within Ac3H11_281 at 105.449 kb on + strand, within Ac3H11_281 at 105.449 kb on + strand, within Ac3H11_281 at 105.449 kb on + strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.450 kb on - strand, within Ac3H11_281 at 105.903 kb on + strand, within Ac3H11_282 at 105.903 kb on + strand, within Ac3H11_282 at 105.903 kb on + strand, within Ac3H11_282 at 105.903 kb on + strand, within Ac3H11_282 at 105.903 kb on + strand, within Ac3H11_282 at 105.903 kb on + strand, within Ac3H11_282 at 105.903 kb on + strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282 at 105.904 kb on - strand, within Ac3H11_282
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0001 mg/ml remove 103,672 - -0.9 103,934 - Ac3H11_279 0.29 +0.1 104,275 + Ac3H11_279 0.71 +1.5 104,276 - Ac3H11_279 0.72 +2.6 104,276 - Ac3H11_279 0.72 +0.8 104,330 + Ac3H11_279 0.78 -1.6 104,330 + Ac3H11_279 0.78 +0.0 104,330 + Ac3H11_279 0.78 +1.4 104,330 + Ac3H11_279 0.78 +0.4 104,331 - Ac3H11_279 0.78 -0.1 104,331 - Ac3H11_279 0.78 +1.1 104,331 - Ac3H11_279 0.78 +0.5 104,331 - Ac3H11_279 0.78 +2.4 104,331 - Ac3H11_279 0.78 -1.2 104,331 - Ac3H11_279 0.78 -0.7 104,331 - Ac3H11_279 0.78 +0.2 104,331 - Ac3H11_279 0.78 -0.4 104,627 + -1.0 104,628 - +1.6 104,978 + -0.4 104,979 - +1.6 104,979 - +0.8 105,030 - +3.3 105,031 + -0.3 105,032 - +0.1 105,048 + +2.4 105,048 + +0.9 105,056 - +0.9 105,056 - +0.3 105,074 - +1.1 105,074 - +1.5 105,074 - -1.4 105,074 - +0.5 105,176 + +1.7 105,177 - +0.0 105,177 - +0.0 105,177 - -0.8 105,177 - +0.6 105,177 - -0.2 105,449 + Ac3H11_281 0.52 -0.2 105,449 + Ac3H11_281 0.52 +1.1 105,449 + Ac3H11_281 0.52 -0.6 105,449 + Ac3H11_281 0.52 -0.3 105,449 + Ac3H11_281 0.52 +0.7 105,450 - Ac3H11_281 0.53 +0.8 105,450 - Ac3H11_281 0.53 +0.1 105,450 - Ac3H11_281 0.53 +1.0 105,450 - Ac3H11_281 0.53 +0.6 105,450 - Ac3H11_281 0.53 +0.8 105,450 - Ac3H11_281 0.53 -0.4 105,450 - Ac3H11_281 0.53 +1.5 105,903 + Ac3H11_282 0.16 +0.3 105,903 + Ac3H11_282 0.16 -0.6 105,903 + Ac3H11_282 0.16 +0.1 105,903 + Ac3H11_282 0.16 +0.9 105,903 + Ac3H11_282 0.16 +0.9 105,903 + Ac3H11_282 0.16 +0.4 105,903 + Ac3H11_282 0.16 +0.6 105,904 - Ac3H11_282 0.17 -2.1 105,904 - Ac3H11_282 0.17 -1.7 105,904 - Ac3H11_282 0.17 -0.3 105,904 - Ac3H11_282 0.17 +0.3 105,904 - Ac3H11_282 0.17 -1.0 105,904 - Ac3H11_282 0.17 +0.6 105,904 - Ac3H11_282 0.17 +0.7
Or see this region's nucleotide sequence