Experiment: Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1707 and Ac3H11_1708 are separated by 19 nucleotides Ac3H11_1708 and Ac3H11_1709 are separated by 196 nucleotides Ac3H11_1709 and Ac3H11_1710 are separated by 24 nucleotides
Ac3H11_1707 - FIG00933533: hypothetical protein, at 308,438 to 310,291
_1707
Ac3H11_1708 - FIG00932121: hypothetical protein, at 310,311 to 310,616
_1708
Ac3H11_1709 - Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2), at 310,813 to 311,400
_1709
Ac3H11_1710 - Virulence factor mviM, at 311,425 to 312,129
_1710
Position (kb) 310
311 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 309.588 kb on + strand, within Ac3H11_1707 at 309.588 kb on + strand, within Ac3H11_1707 at 309.589 kb on - strand, within Ac3H11_1707 at 309.589 kb on - strand, within Ac3H11_1707 at 309.639 kb on + strand, within Ac3H11_1707 at 309.639 kb on + strand, within Ac3H11_1707 at 309.732 kb on + strand, within Ac3H11_1707 at 309.732 kb on + strand, within Ac3H11_1707 at 309.733 kb on - strand, within Ac3H11_1707 at 309.733 kb on - strand, within Ac3H11_1707 at 309.733 kb on - strand, within Ac3H11_1707 at 309.777 kb on + strand, within Ac3H11_1707 at 309.778 kb on - strand, within Ac3H11_1707 at 309.778 kb on - strand, within Ac3H11_1707 at 310.147 kb on + strand at 310.147 kb on + strand at 310.148 kb on - strand at 310.185 kb on + strand at 310.185 kb on + strand at 310.185 kb on + strand at 310.186 kb on - strand at 310.186 kb on - strand at 310.186 kb on - strand at 310.221 kb on + strand at 310.335 kb on - strand at 310.335 kb on - strand at 310.335 kb on - strand at 310.335 kb on - strand at 310.335 kb on - strand at 310.410 kb on + strand, within Ac3H11_1708 at 310.411 kb on - strand, within Ac3H11_1708 at 310.419 kb on + strand, within Ac3H11_1708 at 310.419 kb on + strand, within Ac3H11_1708 at 310.419 kb on + strand, within Ac3H11_1708 at 310.419 kb on + strand, within Ac3H11_1708 at 310.419 kb on + strand, within Ac3H11_1708 at 310.419 kb on + strand, within Ac3H11_1708 at 310.420 kb on - strand, within Ac3H11_1708 at 310.420 kb on - strand, within Ac3H11_1708 at 310.420 kb on - strand, within Ac3H11_1708 at 310.420 kb on - strand, within Ac3H11_1708 at 310.434 kb on + strand, within Ac3H11_1708 at 310.434 kb on + strand, within Ac3H11_1708 at 310.434 kb on + strand, within Ac3H11_1708 at 310.435 kb on - strand, within Ac3H11_1708 at 310.435 kb on - strand, within Ac3H11_1708 at 310.435 kb on - strand, within Ac3H11_1708 at 310.435 kb on - strand, within Ac3H11_1708 at 310.488 kb on + strand, within Ac3H11_1708 at 310.500 kb on + strand, within Ac3H11_1708 at 310.500 kb on + strand, within Ac3H11_1708 at 310.500 kb on + strand, within Ac3H11_1708 at 310.500 kb on + strand, within Ac3H11_1708 at 310.500 kb on + strand, within Ac3H11_1708 at 310.501 kb on - strand, within Ac3H11_1708 at 310.501 kb on - strand, within Ac3H11_1708 at 310.815 kb on - strand at 310.857 kb on - strand at 311.087 kb on + strand, within Ac3H11_1709 at 311.400 kb on + strand at 311.400 kb on + strand at 311.400 kb on + strand at 311.400 kb on + strand at 311.400 kb on + strand at 311.401 kb on - strand at 311.474 kb on + strand at 311.475 kb on - strand at 311.518 kb on + strand, within Ac3H11_1710 at 311.519 kb on - strand, within Ac3H11_1710
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0001 mg/ml remove 309,588 + Ac3H11_1707 0.62 +0.7 309,588 + Ac3H11_1707 0.62 +0.2 309,589 - Ac3H11_1707 0.62 -0.5 309,589 - Ac3H11_1707 0.62 +0.5 309,639 + Ac3H11_1707 0.65 +0.9 309,639 + Ac3H11_1707 0.65 -0.6 309,732 + Ac3H11_1707 0.70 -0.6 309,732 + Ac3H11_1707 0.70 -1.0 309,733 - Ac3H11_1707 0.70 -0.6 309,733 - Ac3H11_1707 0.70 +1.4 309,733 - Ac3H11_1707 0.70 -0.4 309,777 + Ac3H11_1707 0.72 -0.8 309,778 - Ac3H11_1707 0.72 -1.1 309,778 - Ac3H11_1707 0.72 -1.9 310,147 + +1.2 310,147 + +0.1 310,148 - -0.8 310,185 + -0.3 310,185 + -0.0 310,185 + +1.4 310,186 - +1.4 310,186 - +0.8 310,186 - -0.0 310,221 + +0.9 310,335 - -0.9 310,335 - -1.2 310,335 - +0.1 310,335 - -3.0 310,335 - +1.5 310,410 + Ac3H11_1708 0.32 -2.1 310,411 - Ac3H11_1708 0.33 -0.6 310,419 + Ac3H11_1708 0.35 -0.3 310,419 + Ac3H11_1708 0.35 +0.1 310,419 + Ac3H11_1708 0.35 -0.8 310,419 + Ac3H11_1708 0.35 -0.3 310,419 + Ac3H11_1708 0.35 +0.4 310,419 + Ac3H11_1708 0.35 -0.6 310,420 - Ac3H11_1708 0.36 -0.2 310,420 - Ac3H11_1708 0.36 -0.2 310,420 - Ac3H11_1708 0.36 -0.7 310,420 - Ac3H11_1708 0.36 +1.4 310,434 + Ac3H11_1708 0.40 -1.9 310,434 + Ac3H11_1708 0.40 -0.1 310,434 + Ac3H11_1708 0.40 -1.0 310,435 - Ac3H11_1708 0.41 +0.5 310,435 - Ac3H11_1708 0.41 -0.1 310,435 - Ac3H11_1708 0.41 -1.0 310,435 - Ac3H11_1708 0.41 -0.4 310,488 + Ac3H11_1708 0.58 +0.2 310,500 + Ac3H11_1708 0.62 +0.0 310,500 + Ac3H11_1708 0.62 +0.9 310,500 + Ac3H11_1708 0.62 +0.0 310,500 + Ac3H11_1708 0.62 -0.5 310,500 + Ac3H11_1708 0.62 +1.1 310,501 - Ac3H11_1708 0.62 -0.1 310,501 - Ac3H11_1708 0.62 -0.5 310,815 - -0.9 310,857 - +2.8 311,087 + Ac3H11_1709 0.47 +1.8 311,400 + +0.2 311,400 + -1.1 311,400 + -0.8 311,400 + -2.1 311,400 + +0.2 311,401 - +0.6 311,474 + +0.7 311,475 - +0.3 311,518 + Ac3H11_1710 0.13 +0.2 311,519 - Ac3H11_1710 0.13 -0.5
Or see this region's nucleotide sequence