Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30525 and AZOBR_RS30530 are separated by 281 nucleotides
AZOBR_RS30525: AZOBR_RS30525 - hypothetical protein, at 196,032 to 197,018
_RS30525
AZOBR_RS30530: AZOBR_RS30530 - peptidase M23, at 197,300 to 198,643
_RS30530
Position (kb) 197
198
199 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 196.791 kb on + strand, within AZOBR_RS30525 at 196.791 kb on + strand, within AZOBR_RS30525 at 196.815 kb on + strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 197.112 kb on + strand at 197.112 kb on + strand at 197.112 kb on + strand at 197.270 kb on - strand at 197.270 kb on - strand at 197.270 kb on - strand at 197.508 kb on + strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.622 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.662 kb on - strand, within AZOBR_RS30530 at 197.662 kb on - strand, within AZOBR_RS30530 at 197.671 kb on - strand, within AZOBR_RS30530 at 197.877 kb on + strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.914 kb on - strand, within AZOBR_RS30530 at 197.914 kb on - strand, within AZOBR_RS30530 at 197.923 kb on - strand, within AZOBR_RS30530 at 198.007 kb on - strand, within AZOBR_RS30530 at 198.007 kb on - strand, within AZOBR_RS30530 at 198.060 kb on + strand, within AZOBR_RS30530 at 198.060 kb on + strand, within AZOBR_RS30530 at 198.060 kb on + strand, within AZOBR_RS30530 at 198.061 kb on - strand, within AZOBR_RS30530 at 198.066 kb on + strand, within AZOBR_RS30530 at 198.067 kb on - strand, within AZOBR_RS30530 at 198.067 kb on - strand, within AZOBR_RS30530 at 198.067 kb on - strand, within AZOBR_RS30530 at 198.345 kb on + strand, within AZOBR_RS30530 at 198.346 kb on - strand, within AZOBR_RS30530 at 198.412 kb on + strand, within AZOBR_RS30530 at 198.412 kb on + strand, within AZOBR_RS30530 at 198.552 kb on + strand at 198.655 kb on + strand at 198.655 kb on + strand at 198.655 kb on + strand at 198.656 kb on - strand at 198.656 kb on - strand at 198.656 kb on - strand at 198.656 kb on - strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.868 kb on + strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.869 kb on - strand at 198.890 kb on - strand at 198.897 kb on + strand at 198.897 kb on + strand at 198.897 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 196,791 + AZOBR_RS30525 0.77 +0.6 196,791 + AZOBR_RS30525 0.77 -0.2 196,815 + AZOBR_RS30525 0.79 +0.4 196,816 - AZOBR_RS30525 0.79 +0.5 196,816 - AZOBR_RS30525 0.79 -0.2 196,816 - AZOBR_RS30525 0.79 +1.2 197,112 + +0.3 197,112 + +0.7 197,112 + +0.0 197,270 - +0.8 197,270 - -0.3 197,270 - +0.4 197,508 + AZOBR_RS30530 0.15 +0.9 197,509 - AZOBR_RS30530 0.16 +0.5 197,509 - AZOBR_RS30530 0.16 +0.4 197,509 - AZOBR_RS30530 0.16 -0.1 197,551 - AZOBR_RS30530 0.19 +0.6 197,551 - AZOBR_RS30530 0.19 +0.9 197,551 - AZOBR_RS30530 0.19 +1.1 197,622 + AZOBR_RS30530 0.24 +0.4 197,661 + AZOBR_RS30530 0.27 +0.3 197,661 + AZOBR_RS30530 0.27 +2.1 197,661 + AZOBR_RS30530 0.27 +0.3 197,662 - AZOBR_RS30530 0.27 +1.0 197,662 - AZOBR_RS30530 0.27 +0.6 197,671 - AZOBR_RS30530 0.28 +1.4 197,877 + AZOBR_RS30530 0.43 -0.1 197,878 - AZOBR_RS30530 0.43 +0.7 197,878 - AZOBR_RS30530 0.43 -1.4 197,878 - AZOBR_RS30530 0.43 +0.7 197,914 - AZOBR_RS30530 0.46 +0.9 197,914 - AZOBR_RS30530 0.46 +2.8 197,923 - AZOBR_RS30530 0.46 +0.7 198,007 - AZOBR_RS30530 0.53 +0.3 198,007 - AZOBR_RS30530 0.53 +1.1 198,060 + AZOBR_RS30530 0.57 -2.7 198,060 + AZOBR_RS30530 0.57 +0.5 198,060 + AZOBR_RS30530 0.57 +0.6 198,061 - AZOBR_RS30530 0.57 +1.6 198,066 + AZOBR_RS30530 0.57 +0.5 198,067 - AZOBR_RS30530 0.57 +0.7 198,067 - AZOBR_RS30530 0.57 -0.5 198,067 - AZOBR_RS30530 0.57 +1.1 198,345 + AZOBR_RS30530 0.78 -0.1 198,346 - AZOBR_RS30530 0.78 +0.6 198,412 + AZOBR_RS30530 0.83 +1.6 198,412 + AZOBR_RS30530 0.83 +0.0 198,552 + +0.5 198,655 + +0.5 198,655 + +0.2 198,655 + +1.4 198,656 - +0.5 198,656 - +0.0 198,656 - +0.9 198,656 - +0.6 198,868 + +0.4 198,868 + +0.6 198,868 + +1.2 198,868 + +0.7 198,868 + +1.6 198,868 + +0.4 198,868 + +0.3 198,868 + -0.9 198,868 + -0.4 198,869 - +1.5 198,869 - +0.7 198,869 - +0.1 198,869 - -1.6 198,869 - +2.1 198,869 - +0.0 198,869 - +0.3 198,869 - +0.2 198,890 - +1.1 198,897 + -0.6 198,897 + +0.8 198,897 + +0.5
Or see this region's nucleotide sequence