Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25915 and AZOBR_RS25920 are separated by 49 nucleotides AZOBR_RS25920 and AZOBR_RS25925 are separated by 180 nucleotides AZOBR_RS25925 and AZOBR_RS25930 are separated by 15 nucleotides AZOBR_RS25930 and AZOBR_RS25935 are separated by 22 nucleotides
AZOBR_RS25915: AZOBR_RS25915 - ATPase, at 868,880 to 869,446
_RS25915
AZOBR_RS25920: AZOBR_RS25920 - flavodoxin, at 869,496 to 869,963
_RS25920
AZOBR_RS25925: AZOBR_RS25925 - type II citrate synthase, at 870,144 to 871,427
_RS25925
AZOBR_RS25930: AZOBR_RS25930 - aldose 1-epimerase, at 871,443 to 872,306
_RS25930
AZOBR_RS25935: AZOBR_RS25935 - antibiotic resistance protein, at 872,329 to 872,976
_RS25935
Position (kb) 870
871
872 Strain fitness (log2 ratio) -1
0
1 at 869.470 kb on + strand at 869.471 kb on - strand at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.733 kb on + strand, within AZOBR_RS25920 at 869.733 kb on + strand, within AZOBR_RS25920 at 869.734 kb on - strand, within AZOBR_RS25920 at 869.734 kb on - strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.737 kb on - strand, within AZOBR_RS25920 at 869.737 kb on - strand, within AZOBR_RS25920 at 869.769 kb on + strand, within AZOBR_RS25920 at 869.970 kb on - strand at 869.990 kb on + strand at 870.003 kb on - strand at 870.003 kb on - strand at 870.024 kb on + strand at 870.024 kb on + strand at 870.025 kb on - strand at 870.025 kb on - strand at 870.025 kb on - strand at 870.034 kb on + strand at 870.034 kb on + strand at 870.035 kb on - strand at 870.075 kb on - strand at 870.238 kb on - strand at 870.275 kb on + strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.309 kb on + strand, within AZOBR_RS25925 at 870.310 kb on - strand, within AZOBR_RS25925 at 870.381 kb on + strand, within AZOBR_RS25925 at 870.462 kb on + strand, within AZOBR_RS25925 at 870.462 kb on + strand, within AZOBR_RS25925 at 870.463 kb on - strand, within AZOBR_RS25925 at 870.499 kb on - strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.571 kb on - strand, within AZOBR_RS25925 at 870.663 kb on + strand, within AZOBR_RS25925 at 870.694 kb on - strand, within AZOBR_RS25925 at 870.715 kb on - strand, within AZOBR_RS25925 at 870.732 kb on + strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 871.068 kb on + strand, within AZOBR_RS25925 at 871.068 kb on + strand, within AZOBR_RS25925 at 871.104 kb on + strand, within AZOBR_RS25925 at 871.104 kb on + strand, within AZOBR_RS25925 at 871.105 kb on - strand, within AZOBR_RS25925 at 871.191 kb on + strand, within AZOBR_RS25925 at 871.192 kb on - strand, within AZOBR_RS25925 at 871.192 kb on - strand, within AZOBR_RS25925 at 871.213 kb on - strand, within AZOBR_RS25925 at 871.213 kb on - strand, within AZOBR_RS25925 at 871.231 kb on - strand, within AZOBR_RS25925 at 871.377 kb on + strand at 871.444 kb on + strand at 871.445 kb on - strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.467 kb on - strand at 871.467 kb on - strand at 871.467 kb on - strand at 871.467 kb on - strand at 871.467 kb on - strand at 872.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 869,470 + -0.3 869,471 - +0.4 869,694 + AZOBR_RS25920 0.42 -0.7 869,694 + AZOBR_RS25920 0.42 +0.3 869,694 + AZOBR_RS25920 0.42 +0.1 869,694 + AZOBR_RS25920 0.42 +0.2 869,696 + AZOBR_RS25920 0.43 -0.5 869,696 + AZOBR_RS25920 0.43 +0.2 869,696 + AZOBR_RS25920 0.43 +0.3 869,696 + AZOBR_RS25920 0.43 +0.6 869,697 - AZOBR_RS25920 0.43 -0.8 869,697 - AZOBR_RS25920 0.43 +0.9 869,697 - AZOBR_RS25920 0.43 +0.3 869,697 - AZOBR_RS25920 0.43 +0.0 869,733 + AZOBR_RS25920 0.51 +0.0 869,733 + AZOBR_RS25920 0.51 +0.0 869,734 - AZOBR_RS25920 0.51 -0.1 869,734 - AZOBR_RS25920 0.51 -0.4 869,736 + AZOBR_RS25920 0.51 +0.3 869,736 + AZOBR_RS25920 0.51 -0.5 869,736 + AZOBR_RS25920 0.51 +0.5 869,737 - AZOBR_RS25920 0.51 -0.1 869,737 - AZOBR_RS25920 0.51 +0.1 869,769 + AZOBR_RS25920 0.58 +0.1 869,970 - +0.6 869,990 + +0.9 870,003 - -0.2 870,003 - +0.9 870,024 + -0.0 870,024 + +0.1 870,025 - +0.8 870,025 - +0.4 870,025 - -0.2 870,034 + +0.5 870,034 + +0.5 870,035 - -0.1 870,075 - -0.1 870,238 - +0.1 870,275 + AZOBR_RS25925 0.10 +0.1 870,276 - AZOBR_RS25925 0.10 +0.7 870,276 - AZOBR_RS25925 0.10 +1.0 870,276 - AZOBR_RS25925 0.10 -0.0 870,309 + AZOBR_RS25925 0.13 +0.4 870,310 - AZOBR_RS25925 0.13 +0.4 870,381 + AZOBR_RS25925 0.18 -0.1 870,462 + AZOBR_RS25925 0.25 +0.6 870,462 + AZOBR_RS25925 0.25 +1.0 870,463 - AZOBR_RS25925 0.25 +0.3 870,499 - AZOBR_RS25925 0.28 +0.1 870,570 + AZOBR_RS25925 0.33 -0.1 870,570 + AZOBR_RS25925 0.33 +0.2 870,570 + AZOBR_RS25925 0.33 -0.9 870,571 - AZOBR_RS25925 0.33 +1.0 870,663 + AZOBR_RS25925 0.40 +0.7 870,694 - AZOBR_RS25925 0.43 +0.2 870,715 - AZOBR_RS25925 0.44 -0.2 870,732 + AZOBR_RS25925 0.46 +0.4 870,733 - AZOBR_RS25925 0.46 -0.2 870,733 - AZOBR_RS25925 0.46 +0.5 870,733 - AZOBR_RS25925 0.46 -0.4 870,733 - AZOBR_RS25925 0.46 -0.5 871,068 + AZOBR_RS25925 0.72 -0.4 871,068 + AZOBR_RS25925 0.72 -1.2 871,104 + AZOBR_RS25925 0.75 +0.5 871,104 + AZOBR_RS25925 0.75 -0.9 871,105 - AZOBR_RS25925 0.75 -0.1 871,191 + AZOBR_RS25925 0.82 -0.4 871,192 - AZOBR_RS25925 0.82 -0.0 871,192 - AZOBR_RS25925 0.82 +0.2 871,213 - AZOBR_RS25925 0.83 +0.2 871,213 - AZOBR_RS25925 0.83 +1.0 871,231 - AZOBR_RS25925 0.85 +0.1 871,377 + -0.5 871,444 + +0.1 871,445 - +1.2 871,466 + +0.7 871,466 + +0.0 871,466 + -0.1 871,466 + -0.3 871,466 + -0.1 871,466 + +0.6 871,466 + +0.6 871,466 + -0.5 871,466 + -0.4 871,467 - +0.5 871,467 - -0.4 871,467 - -0.0 871,467 - +0.5 871,467 - -0.0 872,343 - -0.2
Or see this region's nucleotide sequence