Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17160 and AZOBR_RS17165 are separated by 16 nucleotides AZOBR_RS17165 and AZOBR_RS17170 are separated by 270 nucleotides AZOBR_RS17170 and AZOBR_RS17175 are separated by 162 nucleotides AZOBR_RS17175 and AZOBR_RS17180 are separated by 53 nucleotides AZOBR_RS17180 and AZOBR_RS17185 are separated by 92 nucleotides
AZOBR_RS17160: AZOBR_RS17160 - hypothetical protein, at 602,140 to 604,005
_RS17160
AZOBR_RS17165: AZOBR_RS17165 - hypothetical protein, at 604,022 to 604,291
_RS17165
AZOBR_RS17170: AZOBR_RS17170 - hypothetical protein, at 604,562 to 604,756
_RS17170
AZOBR_RS17175: AZOBR_RS17175 - hypothetical protein, at 604,919 to 606,181
_RS17175
AZOBR_RS17180: AZOBR_RS17180 - tfuA protein, at 606,235 to 606,966
_RS17180
AZOBR_RS17185: AZOBR_RS17185 - Crp/Fnr family transcriptional regulator, at 607,059 to 607,769
_RS17185
Position (kb) 604
605
606
607 Strain fitness (log2 ratio) -2
-1
0
1 at 604.013 kb on + strand at 604.013 kb on + strand at 604.014 kb on - strand at 604.077 kb on + strand, within AZOBR_RS17165 at 604.077 kb on + strand, within AZOBR_RS17165 at 604.078 kb on - strand, within AZOBR_RS17165 at 604.078 kb on - strand, within AZOBR_RS17165 at 604.335 kb on - strand at 604.406 kb on + strand at 604.407 kb on - strand at 604.513 kb on + strand at 604.513 kb on + strand at 604.514 kb on - strand at 605.252 kb on + strand, within AZOBR_RS17175 at 605.252 kb on + strand, within AZOBR_RS17175 at 605.262 kb on - strand, within AZOBR_RS17175 at 605.882 kb on + strand, within AZOBR_RS17175 at 605.882 kb on + strand, within AZOBR_RS17175 at 605.883 kb on - strand, within AZOBR_RS17175 at 606.141 kb on - strand at 606.204 kb on + strand at 606.205 kb on - strand at 606.205 kb on - strand at 606.205 kb on - strand at 606.256 kb on + strand at 606.316 kb on + strand, within AZOBR_RS17180 at 606.317 kb on - strand, within AZOBR_RS17180 at 606.317 kb on - strand, within AZOBR_RS17180 at 606.317 kb on - strand, within AZOBR_RS17180
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 604,013 + +0.0 604,013 + +0.3 604,014 - -0.2 604,077 + AZOBR_RS17165 0.20 -0.2 604,077 + AZOBR_RS17165 0.20 -0.4 604,078 - AZOBR_RS17165 0.21 +0.8 604,078 - AZOBR_RS17165 0.21 -0.0 604,335 - -0.3 604,406 + +1.0 604,407 - -0.1 604,513 + +0.3 604,513 + +0.2 604,514 - +0.0 605,252 + AZOBR_RS17175 0.26 -0.2 605,252 + AZOBR_RS17175 0.26 +0.2 605,262 - AZOBR_RS17175 0.27 -1.3 605,882 + AZOBR_RS17175 0.76 -0.2 605,882 + AZOBR_RS17175 0.76 +0.5 605,883 - AZOBR_RS17175 0.76 +0.0 606,141 - +0.2 606,204 + +1.1 606,205 - +0.4 606,205 - -0.3 606,205 - +0.1 606,256 + -0.6 606,316 + AZOBR_RS17180 0.11 +0.4 606,317 - AZOBR_RS17180 0.11 +0.1 606,317 - AZOBR_RS17180 0.11 -2.0 606,317 - AZOBR_RS17180 0.11 +1.1
Or see this region's nucleotide sequence