Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS12240
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,567,025 | - | -0.3 | |||
2,568,210 | - | AZOBR_RS12240 | 0.17 | +0.0 | |
2,568,377 | + | AZOBR_RS12240 | 0.29 | +1.1 | |
2,568,378 | - | AZOBR_RS12240 | 0.29 | +0.4 | |
2,568,380 | + | AZOBR_RS12240 | 0.29 | +0.2 | |
2,568,548 | + | AZOBR_RS12240 | 0.41 | -0.0 | |
2,568,549 | - | AZOBR_RS12240 | 0.41 | -0.3 | |
2,568,549 | - | AZOBR_RS12240 | 0.41 | -0.6 | |
2,568,563 | + | AZOBR_RS12240 | 0.42 | -0.1 | |
2,568,563 | + | AZOBR_RS12240 | 0.42 | +0.1 | |
2,568,563 | + | AZOBR_RS12240 | 0.42 | -0.2 | |
2,568,563 | + | AZOBR_RS12240 | 0.42 | -0.1 | |
2,568,713 | + | AZOBR_RS12240 | 0.53 | +0.7 | |
2,568,786 | - | AZOBR_RS12240 | 0.58 | -0.3 | |
2,569,245 | - | +0.6 | |||
2,569,245 | - | +0.3 | |||
2,569,245 | - | +0.9 | |||
2,569,245 | - | +0.0 | |||
2,569,425 | - | -0.2 | |||
2,569,439 | + | +0.3 | |||
2,569,439 | + | +0.7 | |||
2,569,586 | - | -0.1 | |||
2,569,586 | - | -2.3 | |||
2,569,611 | + | +0.3 | |||
2,570,069 | + | AZOBR_RS12245 | 0.12 | -0.1 | |
2,570,069 | + | AZOBR_RS12245 | 0.12 | +0.0 | |
2,570,069 | + | AZOBR_RS12245 | 0.12 | +0.5 | |
2,570,070 | - | AZOBR_RS12245 | 0.12 | +0.6 | |
2,570,073 | - | AZOBR_RS12245 | 0.12 | -0.1 | |
2,570,309 | + | AZOBR_RS12245 | 0.18 | -0.6 | |
2,570,310 | - | AZOBR_RS12245 | 0.18 | +0.1 |
Or see this region's nucleotide sequence