Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09790 and AZOBR_RS09795 are separated by 3 nucleotides AZOBR_RS09795 and AZOBR_RS09800 are separated by 268 nucleotides AZOBR_RS09800 and AZOBR_RS09805 are separated by 6 nucleotides
AZOBR_RS09790: AZOBR_RS09790 - amino acid-binding protein, at 2,053,607 to 2,054,005
_RS09790
AZOBR_RS09795: AZOBR_RS09795 - hypothetical protein, at 2,054,009 to 2,055,883
_RS09795
AZOBR_RS09800: AZOBR_RS09800 - hypothetical protein, at 2,056,152 to 2,056,484
_RS09800
AZOBR_RS09805: AZOBR_RS09805 - peptide chain release factor I, at 2,056,491 to 2,056,910
_RS09805
Position (kb)
2054
2055
2056 Strain fitness (log2 ratio)
-1
0
1 at 2053.913 kb on + strand, within AZOBR_RS09790 at 2053.913 kb on + strand, within AZOBR_RS09790 at 2053.914 kb on - strand, within AZOBR_RS09790 at 2053.914 kb on - strand, within AZOBR_RS09790 at 2053.926 kb on - strand, within AZOBR_RS09790 at 2054.253 kb on + strand, within AZOBR_RS09795 at 2054.254 kb on - strand, within AZOBR_RS09795 at 2054.254 kb on - strand, within AZOBR_RS09795 at 2054.664 kb on + strand, within AZOBR_RS09795 at 2054.866 kb on - strand, within AZOBR_RS09795 at 2054.866 kb on - strand, within AZOBR_RS09795 at 2055.099 kb on + strand, within AZOBR_RS09795 at 2055.099 kb on + strand, within AZOBR_RS09795 at 2055.099 kb on + strand, within AZOBR_RS09795 at 2055.100 kb on - strand, within AZOBR_RS09795 at 2055.100 kb on - strand, within AZOBR_RS09795 at 2055.133 kb on - strand, within AZOBR_RS09795 at 2055.558 kb on + strand, within AZOBR_RS09795 at 2055.558 kb on + strand, within AZOBR_RS09795 at 2055.559 kb on - strand, within AZOBR_RS09795 at 2055.765 kb on + strand at 2055.766 kb on - strand at 2056.018 kb on + strand at 2056.019 kb on - strand at 2056.040 kb on + strand at 2056.046 kb on + strand at 2056.047 kb on - strand at 2056.047 kb on - strand at 2056.225 kb on - strand, within AZOBR_RS09800 at 2056.363 kb on - strand, within AZOBR_RS09800 at 2056.363 kb on - strand, within AZOBR_RS09800 at 2056.482 kb on + strand at 2056.483 kb on - strand at 2056.679 kb on - strand, within AZOBR_RS09805
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,053,913 + AZOBR_RS09790 0.77 +0.0 2,053,913 + AZOBR_RS09790 0.77 -0.3 2,053,914 - AZOBR_RS09790 0.77 +0.1 2,053,914 - AZOBR_RS09790 0.77 -0.6 2,053,926 - AZOBR_RS09790 0.80 -0.4 2,054,253 + AZOBR_RS09795 0.13 +0.2 2,054,254 - AZOBR_RS09795 0.13 -0.2 2,054,254 - AZOBR_RS09795 0.13 -0.5 2,054,664 + AZOBR_RS09795 0.35 +0.1 2,054,866 - AZOBR_RS09795 0.46 +0.4 2,054,866 - AZOBR_RS09795 0.46 +0.1 2,055,099 + AZOBR_RS09795 0.58 +0.5 2,055,099 + AZOBR_RS09795 0.58 +0.1 2,055,099 + AZOBR_RS09795 0.58 -0.0 2,055,100 - AZOBR_RS09795 0.58 +0.3 2,055,100 - AZOBR_RS09795 0.58 -0.1 2,055,133 - AZOBR_RS09795 0.60 -0.6 2,055,558 + AZOBR_RS09795 0.83 -0.2 2,055,558 + AZOBR_RS09795 0.83 -0.6 2,055,559 - AZOBR_RS09795 0.83 +0.1 2,055,765 + -1.5 2,055,766 - +0.0 2,056,018 + -0.6 2,056,019 - -0.0 2,056,040 + +0.1 2,056,046 + +0.2 2,056,047 - -0.8 2,056,047 - +0.3 2,056,225 - AZOBR_RS09800 0.22 -1.3 2,056,363 - AZOBR_RS09800 0.63 +0.0 2,056,363 - AZOBR_RS09800 0.63 +0.7 2,056,482 + +0.3 2,056,483 - +0.2 2,056,679 - AZOBR_RS09805 0.45 +0.3
Or see this region's nucleotide sequence