Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09735 and AZOBR_RS09740 are separated by 61 nucleotides AZOBR_RS09740 and AZOBR_RS09745 are separated by 169 nucleotides
AZOBR_RS09735: AZOBR_RS09735 - MFS transporter permease, at 2,039,444 to 2,040,793
_RS09735
AZOBR_RS09740: AZOBR_RS09740 - Mn-containing catalase, at 2,040,855 to 2,041,751
_RS09740
AZOBR_RS09745: AZOBR_RS09745 - glutathione reductase, at 2,041,921 to 2,043,273
_RS09745
Position (kb)
2040
2041
2042 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2039.993 kb on + strand, within AZOBR_RS09735 at 2039.993 kb on + strand, within AZOBR_RS09735 at 2039.996 kb on + strand, within AZOBR_RS09735 at 2039.996 kb on + strand, within AZOBR_RS09735 at 2039.996 kb on + strand, within AZOBR_RS09735 at 2039.997 kb on - strand, within AZOBR_RS09735 at 2040.165 kb on - strand, within AZOBR_RS09735 at 2040.242 kb on + strand, within AZOBR_RS09735 at 2040.242 kb on + strand, within AZOBR_RS09735 at 2040.243 kb on - strand at 2040.243 kb on - strand, within AZOBR_RS09735 at 2040.287 kb on + strand, within AZOBR_RS09735 at 2040.287 kb on + strand, within AZOBR_RS09735 at 2040.288 kb on - strand, within AZOBR_RS09735 at 2040.288 kb on - strand, within AZOBR_RS09735 at 2040.584 kb on + strand, within AZOBR_RS09735 at 2040.599 kb on + strand, within AZOBR_RS09735 at 2040.620 kb on + strand, within AZOBR_RS09735 at 2040.620 kb on + strand, within AZOBR_RS09735 at 2040.620 kb on + strand, within AZOBR_RS09735 at 2040.856 kb on + strand at 2040.857 kb on - strand at 2041.111 kb on + strand, within AZOBR_RS09740 at 2041.111 kb on + strand, within AZOBR_RS09740 at 2041.111 kb on + strand, within AZOBR_RS09740 at 2041.111 kb on + strand, within AZOBR_RS09740 at 2041.112 kb on - strand, within AZOBR_RS09740 at 2041.112 kb on - strand, within AZOBR_RS09740 at 2041.112 kb on - strand, within AZOBR_RS09740 at 2041.114 kb on + strand, within AZOBR_RS09740 at 2041.115 kb on - strand, within AZOBR_RS09740 at 2041.177 kb on + strand, within AZOBR_RS09740 at 2041.282 kb on + strand, within AZOBR_RS09740 at 2041.282 kb on + strand, within AZOBR_RS09740 at 2041.283 kb on - strand, within AZOBR_RS09740 at 2041.283 kb on - strand, within AZOBR_RS09740 at 2041.283 kb on - strand, within AZOBR_RS09740 at 2041.283 kb on - strand, within AZOBR_RS09740 at 2041.357 kb on + strand, within AZOBR_RS09740 at 2041.357 kb on + strand, within AZOBR_RS09740 at 2041.358 kb on - strand, within AZOBR_RS09740 at 2041.358 kb on - strand, within AZOBR_RS09740 at 2041.459 kb on + strand, within AZOBR_RS09740 at 2041.628 kb on - strand, within AZOBR_RS09740 at 2041.724 kb on - strand at 2041.755 kb on + strand at 2041.755 kb on + strand at 2041.756 kb on - strand at 2041.910 kb on - strand at 2042.174 kb on + strand, within AZOBR_RS09745 at 2042.174 kb on + strand, within AZOBR_RS09745 at 2042.174 kb on + strand, within AZOBR_RS09745 at 2042.174 kb on + strand, within AZOBR_RS09745 at 2042.175 kb on - strand, within AZOBR_RS09745 at 2042.175 kb on - strand, within AZOBR_RS09745 at 2042.175 kb on - strand, within AZOBR_RS09745 at 2042.175 kb on - strand, within AZOBR_RS09745 at 2042.175 kb on - strand, within AZOBR_RS09745 at 2042.175 kb on - strand, within AZOBR_RS09745 at 2042.274 kb on - strand, within AZOBR_RS09745 at 2042.274 kb on - strand, within AZOBR_RS09745 at 2042.274 kb on - strand, within AZOBR_RS09745 at 2042.274 kb on - strand, within AZOBR_RS09745 at 2042.744 kb on + strand, within AZOBR_RS09745 at 2042.744 kb on + strand, within AZOBR_RS09745 at 2042.744 kb on + strand, within AZOBR_RS09745 at 2042.745 kb on - strand, within AZOBR_RS09745
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,039,993 + AZOBR_RS09735 0.41 -0.5 2,039,993 + AZOBR_RS09735 0.41 -1.5 2,039,996 + AZOBR_RS09735 0.41 -2.2 2,039,996 + AZOBR_RS09735 0.41 -3.4 2,039,996 + AZOBR_RS09735 0.41 -1.9 2,039,997 - AZOBR_RS09735 0.41 -3.7 2,040,165 - AZOBR_RS09735 0.53 -2.7 2,040,242 + AZOBR_RS09735 0.59 -2.7 2,040,242 + AZOBR_RS09735 0.59 -1.9 2,040,243 - +0.2 2,040,243 - AZOBR_RS09735 0.59 -0.5 2,040,287 + AZOBR_RS09735 0.62 -1.5 2,040,287 + AZOBR_RS09735 0.62 -0.2 2,040,288 - AZOBR_RS09735 0.63 -2.6 2,040,288 - AZOBR_RS09735 0.63 -1.6 2,040,584 + AZOBR_RS09735 0.84 -2.3 2,040,599 + AZOBR_RS09735 0.86 -0.9 2,040,620 + AZOBR_RS09735 0.87 -1.4 2,040,620 + AZOBR_RS09735 0.87 +0.3 2,040,620 + AZOBR_RS09735 0.87 -1.5 2,040,856 + +1.1 2,040,857 - +0.1 2,041,111 + AZOBR_RS09740 0.29 -2.3 2,041,111 + AZOBR_RS09740 0.29 +0.7 2,041,111 + AZOBR_RS09740 0.29 +0.3 2,041,111 + AZOBR_RS09740 0.29 +0.1 2,041,112 - AZOBR_RS09740 0.29 +0.8 2,041,112 - AZOBR_RS09740 0.29 +0.0 2,041,112 - AZOBR_RS09740 0.29 +0.2 2,041,114 + AZOBR_RS09740 0.29 +0.1 2,041,115 - AZOBR_RS09740 0.29 -0.3 2,041,177 + AZOBR_RS09740 0.36 +0.1 2,041,282 + AZOBR_RS09740 0.48 -2.2 2,041,282 + AZOBR_RS09740 0.48 +0.4 2,041,283 - AZOBR_RS09740 0.48 -0.8 2,041,283 - AZOBR_RS09740 0.48 +0.4 2,041,283 - AZOBR_RS09740 0.48 -0.4 2,041,283 - AZOBR_RS09740 0.48 -1.0 2,041,357 + AZOBR_RS09740 0.56 +0.7 2,041,357 + AZOBR_RS09740 0.56 -0.2 2,041,358 - AZOBR_RS09740 0.56 +0.4 2,041,358 - AZOBR_RS09740 0.56 -0.7 2,041,459 + AZOBR_RS09740 0.67 -1.5 2,041,628 - AZOBR_RS09740 0.86 +0.2 2,041,724 - -0.2 2,041,755 + +0.9 2,041,755 + -0.1 2,041,756 - +0.1 2,041,910 - +0.4 2,042,174 + AZOBR_RS09745 0.19 +0.1 2,042,174 + AZOBR_RS09745 0.19 +0.7 2,042,174 + AZOBR_RS09745 0.19 -2.9 2,042,174 + AZOBR_RS09745 0.19 +0.8 2,042,175 - AZOBR_RS09745 0.19 +0.3 2,042,175 - AZOBR_RS09745 0.19 +1.0 2,042,175 - AZOBR_RS09745 0.19 +0.7 2,042,175 - AZOBR_RS09745 0.19 +0.2 2,042,175 - AZOBR_RS09745 0.19 +0.0 2,042,175 - AZOBR_RS09745 0.19 +0.6 2,042,274 - AZOBR_RS09745 0.26 +0.6 2,042,274 - AZOBR_RS09745 0.26 +0.5 2,042,274 - AZOBR_RS09745 0.26 +0.0 2,042,274 - AZOBR_RS09745 0.26 -0.4 2,042,744 + AZOBR_RS09745 0.61 +0.7 2,042,744 + AZOBR_RS09745 0.61 +0.5 2,042,744 + AZOBR_RS09745 0.61 +0.3 2,042,745 - AZOBR_RS09745 0.61 +0.2
Or see this region's nucleotide sequence