Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08285 and AZOBR_RS08290 are separated by 235 nucleotides AZOBR_RS08290 and AZOBR_RS08295 are separated by 85 nucleotides AZOBR_RS08295 and AZOBR_RS08300 are separated by 19 nucleotides AZOBR_RS08300 and AZOBR_RS08305 are separated by 42 nucleotides AZOBR_RS08305 and AZOBR_RS08310 are separated by 90 nucleotides
AZOBR_RS08285: AZOBR_RS08285 - histidine kinase, at 1,743,774 to 1,745,237
_RS08285
AZOBR_RS08290: AZOBR_RS08290 - hypothetical protein, at 1,745,473 to 1,745,688
_RS08290
AZOBR_RS08295: AZOBR_RS08295 - membrane protein, at 1,745,774 to 1,746,214
_RS08295
AZOBR_RS08300: AZOBR_RS08300 - pseudouridine synthase, at 1,746,234 to 1,746,923
_RS08300
AZOBR_RS08305: AZOBR_RS08305 - oxidoreductase, at 1,746,966 to 1,747,676
_RS08305
AZOBR_RS08310: AZOBR_RS08310 - amidophosphoribosyltransferase, at 1,747,767 to 1,749,215
_RS08310
Position (kb)
1746
1747 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1745.309 kb on + strand at 1745.310 kb on - strand at 1745.365 kb on + strand at 1745.366 kb on - strand at 1745.721 kb on - strand at 1745.721 kb on - strand at 1745.721 kb on - strand at 1745.790 kb on + strand at 1745.790 kb on + strand at 1745.791 kb on - strand at 1745.791 kb on - strand at 1745.801 kb on + strand at 1745.830 kb on - strand, within AZOBR_RS08295 at 1746.011 kb on + strand, within AZOBR_RS08295 at 1746.150 kb on - strand, within AZOBR_RS08295 at 1746.213 kb on - strand at 1746.284 kb on + strand at 1746.649 kb on + strand, within AZOBR_RS08300 at 1746.649 kb on + strand, within AZOBR_RS08300 at 1746.649 kb on + strand, within AZOBR_RS08300 at 1746.649 kb on + strand, within AZOBR_RS08300 at 1746.650 kb on - strand, within AZOBR_RS08300 at 1746.650 kb on - strand, within AZOBR_RS08300 at 1746.889 kb on + strand at 1747.165 kb on + strand, within AZOBR_RS08305 at 1747.165 kb on + strand, within AZOBR_RS08305 at 1747.165 kb on + strand, within AZOBR_RS08305 at 1747.165 kb on + strand, within AZOBR_RS08305 at 1747.367 kb on - strand at 1747.450 kb on + strand, within AZOBR_RS08305
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,745,309 + -0.3 1,745,310 - +0.1 1,745,365 + -0.5 1,745,366 - +0.4 1,745,721 - -0.2 1,745,721 - +0.2 1,745,721 - +0.4 1,745,790 + +1.9 1,745,790 + -0.5 1,745,791 - +0.2 1,745,791 - -1.7 1,745,801 + +0.0 1,745,830 - AZOBR_RS08295 0.13 -0.5 1,746,011 + AZOBR_RS08295 0.54 +0.7 1,746,150 - AZOBR_RS08295 0.85 +0.3 1,746,213 - +0.2 1,746,284 + -1.7 1,746,649 + AZOBR_RS08300 0.60 -0.3 1,746,649 + AZOBR_RS08300 0.60 -0.1 1,746,649 + AZOBR_RS08300 0.60 -0.2 1,746,649 + AZOBR_RS08300 0.60 -0.7 1,746,650 - AZOBR_RS08300 0.60 -0.2 1,746,650 - AZOBR_RS08300 0.60 -1.4 1,746,889 + -0.0 1,747,165 + AZOBR_RS08305 0.28 -0.3 1,747,165 + AZOBR_RS08305 0.28 -2.2 1,747,165 + AZOBR_RS08305 0.28 -0.5 1,747,165 + AZOBR_RS08305 0.28 -1.3 1,747,367 - +2.2 1,747,450 + AZOBR_RS08305 0.68 -0.6
Or see this region's nucleotide sequence