Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06185 and AZOBR_RS06190 are separated by 57 nucleotides AZOBR_RS06190 and AZOBR_RS06195 are separated by 156 nucleotides AZOBR_RS06195 and AZOBR_RS06200 are separated by 320 nucleotides
AZOBR_RS06185: AZOBR_RS06185 - carbonic anhydrase, at 1,310,996 to 1,311,688
_RS06185
AZOBR_RS06190: AZOBR_RS06190 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 1,311,746 to 1,312,339
_RS06190
AZOBR_RS06195: AZOBR_RS06195 - hypothetical protein, at 1,312,496 to 1,313,113
_RS06195
AZOBR_RS06200: AZOBR_RS06200 - NAD(P)H quinone oxidoreductase, at 1,313,434 to 1,314,441
_RS06200
Position (kb) 1312
1313
1314 Strain fitness (log2 ratio) -2
-1
0
1 at 1311.733 kb on - strand at 1313.173 kb on - strand at 1313.230 kb on - strand at 1313.759 kb on + strand, within AZOBR_RS06200 at 1313.759 kb on + strand, within AZOBR_RS06200 at 1313.760 kb on - strand, within AZOBR_RS06200 at 1313.760 kb on - strand, within AZOBR_RS06200 at 1313.847 kb on - strand, within AZOBR_RS06200 at 1313.847 kb on - strand, within AZOBR_RS06200
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,311,733 - +0.3 1,313,173 - -2.1 1,313,230 - -2.1 1,313,759 + AZOBR_RS06200 0.32 +0.0 1,313,759 + AZOBR_RS06200 0.32 -0.9 1,313,760 - AZOBR_RS06200 0.32 +0.4 1,313,760 - AZOBR_RS06200 0.32 +1.0 1,313,847 - AZOBR_RS06200 0.41 -2.4 1,313,847 - AZOBR_RS06200 0.41 +1.7
Or see this region's nucleotide sequence