Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00075 and AZOBR_RS00080 are separated by 314 nucleotides AZOBR_RS00080 and AZOBR_RS00085 are separated by 290 nucleotides AZOBR_RS00085 and AZOBR_RS00090 are separated by 161 nucleotides
AZOBR_RS00075: AZOBR_RS00075 - glycerol-3-phosphate ABC transporter substrate-binding protein, at 3,825 to 5,162
_RS00075
AZOBR_RS00080: AZOBR_RS00080 - hypothetical protein, at 5,477 to 5,824
_RS00080
AZOBR_RS00085: AZOBR_RS00085 - histidine kinase, at 6,115 to 7,206
_RS00085
AZOBR_RS00090: AZOBR_RS00090 - hypothetical protein, at 7,368 to 8,156
_RS00090
Position (kb) 6
7
8 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5.194 kb on + strand at 5.195 kb on - strand at 5.323 kb on + strand at 5.342 kb on + strand at 5.342 kb on + strand at 5.343 kb on - strand at 5.343 kb on - strand at 5.343 kb on - strand at 5.343 kb on - strand at 5.464 kb on + strand at 5.595 kb on + strand, within AZOBR_RS00080 at 5.595 kb on + strand, within AZOBR_RS00080 at 5.595 kb on + strand, within AZOBR_RS00080 at 5.596 kb on - strand, within AZOBR_RS00080 at 5.596 kb on - strand, within AZOBR_RS00080 at 5.596 kb on - strand, within AZOBR_RS00080 at 5.596 kb on - strand, within AZOBR_RS00080 at 5.620 kb on - strand, within AZOBR_RS00080 at 5.658 kb on + strand, within AZOBR_RS00080 at 5.658 kb on + strand, within AZOBR_RS00080 at 5.659 kb on - strand, within AZOBR_RS00080 at 5.706 kb on + strand, within AZOBR_RS00080 at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.962 kb on + strand at 5.963 kb on - strand at 5.963 kb on - strand at 7.233 kb on + strand at 7.235 kb on + strand at 7.310 kb on - strand at 7.310 kb on - strand at 7.392 kb on + strand at 7.394 kb on + strand at 7.395 kb on - strand at 7.395 kb on - strand at 7.395 kb on - strand at 7.395 kb on - strand at 7.403 kb on + strand at 7.404 kb on - strand at 7.404 kb on - strand at 7.710 kb on + strand, within AZOBR_RS00090 at 7.710 kb on + strand, within AZOBR_RS00090 at 7.710 kb on + strand, within AZOBR_RS00090 at 8.013 kb on + strand, within AZOBR_RS00090 at 8.013 kb on + strand, within AZOBR_RS00090 at 8.013 kb on + strand, within AZOBR_RS00090 at 8.014 kb on - strand, within AZOBR_RS00090 at 8.014 kb on - strand, within AZOBR_RS00090
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 5,194 + +0.2 5,195 - +0.0 5,323 + +0.0 5,342 + -0.3 5,342 + -0.1 5,343 - -1.0 5,343 - -0.1 5,343 - -0.0 5,343 - -0.3 5,464 + -0.2 5,595 + AZOBR_RS00080 0.34 -2.0 5,595 + AZOBR_RS00080 0.34 -0.1 5,595 + AZOBR_RS00080 0.34 -0.7 5,596 - AZOBR_RS00080 0.34 -0.5 5,596 - AZOBR_RS00080 0.34 +0.2 5,596 - AZOBR_RS00080 0.34 +0.4 5,596 - AZOBR_RS00080 0.34 +0.3 5,620 - AZOBR_RS00080 0.41 -3.9 5,658 + AZOBR_RS00080 0.52 +0.5 5,658 + AZOBR_RS00080 0.52 -0.4 5,659 - AZOBR_RS00080 0.52 -2.2 5,706 + AZOBR_RS00080 0.66 +0.2 5,962 + -0.2 5,962 + -0.1 5,962 + +0.2 5,962 + +0.3 5,962 + +0.2 5,962 + +0.5 5,962 + -0.2 5,962 + -0.4 5,962 + -0.4 5,963 - -0.1 5,963 - +0.5 7,233 + -1.5 7,235 + -0.3 7,310 - -0.5 7,310 - +0.5 7,392 + -0.2 7,394 + -0.1 7,395 - -0.1 7,395 - -0.3 7,395 - +0.5 7,395 - +0.3 7,403 + +0.2 7,404 - +0.7 7,404 - -0.1 7,710 + AZOBR_RS00090 0.43 -2.2 7,710 + AZOBR_RS00090 0.43 -2.4 7,710 + AZOBR_RS00090 0.43 +0.1 8,013 + AZOBR_RS00090 0.82 -0.1 8,013 + AZOBR_RS00090 0.82 -0.1 8,013 + AZOBR_RS00090 0.82 +0.8 8,014 - AZOBR_RS00090 0.82 +1.0 8,014 - AZOBR_RS00090 0.82 -0.2
Or see this region's nucleotide sequence