Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28270

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
6,161,414	+				+0.0
6,161,414	+				-2.4
6,161,505	-		AO353_28265	0.17	+1.0
6,161,546	+		AO353_28265	0.21	-0.2
6,161,546	+		AO353_28265	0.21	+1.8
6,161,657	+		AO353_28265	0.32	-2.7
6,161,657	+		AO353_28265	0.32	+0.5
6,161,658	-		AO353_28265	0.32	+0.4
6,161,750	+		AO353_28265	0.42	-0.6
6,161,750	+		AO353_28265	0.42	-2.1
6,161,750	+		AO353_28265	0.42	+0.1
6,161,751	-		AO353_28265	0.42	+1.4
6,161,751	-		AO353_28265	0.42	-0.6
6,161,751	-		AO353_28265	0.42	+0.4
6,161,758	+		AO353_28265	0.43	+1.4
6,161,792	+		AO353_28265	0.46	-1.2
6,161,793	-		AO353_28265	0.47	-0.0
6,161,793	-		AO353_28265	0.47	+3.3
6,161,793	-		AO353_28265	0.47	-0.9
6,162,040	-		AO353_28265	0.72	+0.5
6,162,267	+				+1.7
6,162,267	+				+1.4
6,162,297	+				+0.2
6,162,297	+				-1.6
6,162,297	+				-0.6
6,162,297	+				-0.1
6,162,297	+				-0.3
6,162,298	-				+0.1
6,162,298	-				+1.8
6,162,298	-				+1.5
6,162,329	-				-0.2
6,162,386	+				-0.8
6,162,386	+				-1.2
6,162,386	+				-0.0
6,162,387	-				-0.6
6,162,387	-				+0.9
6,162,387	-				+0.7
6,162,387	-				+1.7
6,162,387	-				+1.0
6,162,387	-				+0.2
6,162,420	-				-0.3
6,162,515	+				-0.1
6,162,516	-		AO353_28270	0.10	-0.6
6,162,911	+		AO353_28270	0.34	-1.8
6,162,911	+		AO353_28270	0.34	+0.8
6,162,911	+		AO353_28270	0.34	-1.9
6,162,911	+		AO353_28270	0.34	+0.2
6,162,911	+		AO353_28270	0.34	-0.3
6,162,911	+		AO353_28270	0.34	-0.9
6,162,912	-		AO353_28270	0.34	-1.3
6,162,912	-		AO353_28270	0.34	-1.2
6,162,912	-		AO353_28270	0.34	-2.4
6,162,915	-		AO353_28270	0.34	+1.6
6,163,004	+		AO353_28270	0.40	+1.2
6,163,004	+		AO353_28270	0.40	-1.3
6,163,004	+		AO353_28270	0.40	+1.8
6,163,004	+		AO353_28270	0.40	+0.1
6,163,004	+		AO353_28270	0.40	+2.9
6,163,005	-		AO353_28270	0.40	-0.3
6,163,005	-		AO353_28270	0.40	-1.0
6,163,005	-		AO353_28270	0.40	+0.6
6,163,073	+		AO353_28270	0.44	+1.6
6,163,074	-		AO353_28270	0.44	-2.7
6,163,074	-		AO353_28270	0.44	-0.3
6,163,074	-		AO353_28270	0.44	+2.4
6,163,235	+		AO353_28270	0.54	+0.2
6,163,236	-		AO353_28270	0.54	-3.0
6,163,429	+		AO353_28270	0.66	+2.2
6,163,429	+		AO353_28270	0.66	+1.0
6,163,679	+		AO353_28270	0.81	-2.4
6,163,679	+		AO353_28270	0.81	+4.4
6,163,679	+		AO353_28270	0.81	+0.0
6,163,686	+		AO353_28270	0.81	+1.9
6,163,686	+		AO353_28270	0.81	+0.1
6,163,686	+		AO353_28270	0.81	-2.3
6,163,686	+		AO353_28270	0.81	+1.2
6,163,686	+		AO353_28270	0.81	+1.8
6,163,686	+		AO353_28270	0.81	-0.1
6,163,686	+		AO353_28270	0.81	-0.5
6,163,686	+		AO353_28270	0.81	-0.4
6,163,686	+		AO353_28270	0.81	+0.5
6,163,686	+		AO353_28270	0.81	-1.6
6,163,686	+		AO353_28270	0.81	+0.2
6,163,686	+		AO353_28270	0.81	+2.3
6,163,686	+		AO353_28270	0.81	-1.6
6,163,686	+		AO353_28270	0.81	+1.9
6,163,686	+		AO353_28270	0.81	+3.6
6,163,687	-		AO353_28270	0.82	+1.8
6,163,687	-		AO353_28270	0.82	+1.2
6,163,687	-		AO353_28270	0.82	+2.2
6,163,687	-		AO353_28270	0.82	-0.6
6,163,687	-		AO353_28270	0.82	-0.9
6,163,687	-		AO353_28270	0.82	+0.4
6,163,687	-		AO353_28270	0.82	+1.3
6,163,687	-		AO353_28270	0.82	+0.4
6,163,687	-		AO353_28270	0.82	-2.1
6,163,687	-		AO353_28270	0.82	-1.0
6,163,687	-		AO353_28270	0.82	+0.5
6,163,688	+		AO353_28270	0.82	+0.1
6,163,688	+		AO353_28270	0.82	-1.8
6,163,688	+		AO353_28270	0.82	-0.1
6,163,688	+		AO353_28270	0.82	+0.5
6,163,688	+		AO353_28270	0.82	-1.3
6,163,688	+		AO353_28270	0.82	-2.8
6,163,688	+		AO353_28270	0.82	+1.0
6,163,688	+		AO353_28270	0.82	+0.3
6,163,689	-		AO353_28270	0.82	-2.0
6,163,700	+		AO353_28270	0.82	+1.2
6,163,700	+		AO353_28270	0.82	-0.8
6,163,700	+		AO353_28270	0.82	+0.5
6,163,701	-		AO353_28270	0.82	+1.4
6,163,989	+				-0.8
6,163,989	+				-0.1
6,163,989	+				+2.0
6,163,989	+				-0.9
6,163,989	+				-1.1
6,163,989	+				-0.5
6,163,989	+				-0.9
6,163,990	-				-0.8
6,163,990	-				+0.8
6,163,990	-				+0.7
6,163,990	-				-0.6
6,163,990	-				+1.7
6,163,990	-				-0.6
6,163,990	-				-0.9
6,163,998	+				+1.0
6,163,998	+				+0.3
6,163,998	+				-0.6
6,163,998	+				-0.3
6,163,999	-				+0.1
6,163,999	-				-0.9
6,163,999	-				+0.1
6,164,067	-				+0.3
6,164,094	+				+0.7
6,164,094	+				+1.1
6,164,094	+				+0.1
6,164,095	-				-0.1
6,164,112	+				-0.6
6,164,112	+				-2.3
6,164,112	+				-0.6
6,164,112	+				-3.6
6,164,113	-				+1.0
6,164,113	-				-2.3
6,164,113	-				+0.8
6,164,113	-				+0.7
6,164,113	-				-0.7
6,164,113	-				-1.3
6,164,269	-		AO353_28275	0.15	-1.2
6,164,283	+		AO353_28275	0.16	-0.5
6,164,284	-		AO353_28275	0.16	-1.7
6,164,352	+		AO353_28275	0.21	+0.1
6,164,352	+		AO353_28275	0.21	-1.5
6,164,502	+		AO353_28275	0.33	-1.1
6,164,502	+		AO353_28275	0.33	+1.0
6,164,502	+		AO353_28275	0.33	-0.2
6,164,502	+		AO353_28275	0.33	-0.0
6,164,503	-		AO353_28275	0.33	-0.5
6,164,503	-		AO353_28275	0.33	-0.6
6,164,503	-		AO353_28275	0.33	-0.6
6,164,529	+		AO353_28275	0.35	+0.8
6,164,529	+		AO353_28275	0.35	-1.6
6,164,529	+		AO353_28275	0.35	+0.4
6,164,529	+		AO353_28275	0.35	-3.0
6,164,529	+		AO353_28275	0.35	-0.2
6,164,529	+		AO353_28275	0.35	+0.1
6,164,529	+		AO353_28275	0.35	-0.6
6,164,529	+		AO353_28275	0.35	-0.0
6,164,529	+		AO353_28275	0.35	-1.6
6,164,530	-		AO353_28275	0.35	+1.8
6,164,530	-		AO353_28275	0.35	-1.5
6,164,530	-		AO353_28275	0.35	+0.1
6,164,530	-		AO353_28275	0.35	-0.8
6,164,530	-		AO353_28275	0.35	+0.9
6,164,757	+		AO353_28275	0.53	-1.1
6,164,757	+		AO353_28275	0.53	+0.3
6,164,757	+		AO353_28275	0.53	-0.6
6,164,757	+		AO353_28275	0.53	+2.6
6,164,758	-		AO353_28275	0.53	-0.6
6,164,758	-		AO353_28275	0.53	-0.1
6,164,758	-		AO353_28275	0.53	+0.4
6,164,961	+		AO353_28275	0.69	+1.4
6,164,961	+		AO353_28275	0.69	+2.9
6,164,962	-		AO353_28275	0.69	-0.8
6,164,962	-		AO353_28275	0.69	+0.2
6,164,962	-		AO353_28275	0.69	+1.0