Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26290

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
5,775,420	-		AO353_26275	0.55	-2.6
5,775,470	+		AO353_26275	0.74	+0.9
5,775,471	-		AO353_26275	0.74	-1.6
5,775,514	+				-2.2
5,775,514	+				+2.5
5,775,514	+				-2.1
5,775,514	+				-0.4
5,775,515	-				+0.7
5,775,515	-				-0.6
5,775,515	-				-0.0
5,775,515	-				+1.6
5,775,515	-				+0.6
5,775,515	-				+0.2
5,775,515	-				+1.3
5,775,515	-				-0.4
5,775,515	-				+0.8
5,775,515	-				+1.1
5,775,528	+				+4.5
5,775,528	+				-0.2
5,775,647	+		AO353_26280	0.34	-0.7
5,775,648	-		AO353_26280	0.35	-1.0
5,775,756	+				+1.2
5,775,798	+		AO353_26280	0.83	-1.1
5,775,805	+		AO353_26280	0.85	+0.4
5,775,805	+		AO353_26280	0.85	-1.0
5,775,806	-		AO353_26280	0.85	-1.1
5,775,833	+				+0.6
5,775,833	+				-2.3
5,775,834	-				-1.3
5,775,834	-				+1.1
5,775,856	+				+1.1
5,775,857	-				-1.6
5,775,910	+				-1.8
5,775,910	+				-0.1
5,775,910	+				-0.5
5,775,910	+				-2.0
5,775,911	-				-0.1
5,775,911	-				+0.2
5,775,911	-				+1.7
5,775,911	-				+2.2
5,775,938	+				+0.1
5,775,938	+				+0.1
5,775,938	+				-0.5
5,775,939	-				-1.3
5,775,939	-				+1.3
5,775,946	+				-1.4
5,775,946	+				+0.1
5,775,970	+				+1.5
5,775,970	+				-1.1
5,775,970	+				-0.8
5,775,970	+				+1.8
5,775,970	+				-0.6
5,775,971	-				+1.0
5,776,028	+				-1.1
5,776,028	+				-1.4
5,776,028	+				+0.2
5,776,028	+				-0.1
5,776,028	+				-1.8
5,776,028	+				-1.3
5,776,028	+				+0.3
5,776,028	+				-1.1
5,776,029	-				+0.2
5,776,033	+				+0.5
5,776,033	+				+5.7
5,776,033	+				-1.4
5,776,033	+				+0.6
5,776,034	-				-0.6
5,776,034	-				+3.1
5,776,034	-				+0.2
5,776,048	-		AO353_26285	0.10	+0.4
5,776,123	+		AO353_26285	0.51	+2.7
5,776,123	+				+2.2
5,776,182	-		AO353_26285	0.84	+1.6
5,776,196	+				+0.3
5,776,196	+				-1.1
5,776,196	+				-2.6
5,776,196	+				+0.0
5,776,197	-				-1.1
5,776,197	-				+1.0
5,776,197	-				-1.3
5,776,197	-				-0.1
5,776,197	-				-1.4
5,776,197	-				+0.3
5,776,197	-				+0.6
5,776,213	+				-0.5
5,776,213	+				-1.1
5,776,214	-				-2.4
5,776,214	-				-1.3
5,776,228	+				-0.9
5,776,228	+				+1.9
5,776,229	-				+0.2
5,776,229	-				+0.1
5,776,229	-				+0.6
5,776,274	+				-1.4
5,776,274	+				-1.3
5,776,274	+				-2.3
5,776,275	-				-1.7
5,776,275	-				+0.2
5,776,275	-				+1.1
5,776,275	-				+0.5
5,776,275	-				-0.9
5,776,275	-				+0.1
5,776,416	-				-0.0
5,776,563	+		AO353_26290	0.51	+0.6
5,776,564	-		AO353_26290	0.52	+1.8
5,776,615	-		AO353_26290	0.70	-0.7
5,776,621	+		AO353_26290	0.72	-0.7
5,776,622	-		AO353_26290	0.72	+1.7
5,776,622	-		AO353_26290	0.72	+1.4
5,776,622	-		AO353_26290	0.72	+2.1
5,776,622	-		AO353_26290	0.72	+0.6
5,776,622	-		AO353_26290	0.72	+1.1
5,776,622	-		AO353_26290	0.72	+1.0
5,776,622	-		AO353_26290	0.72	+0.2
5,776,632	+		AO353_26290	0.76	+1.9
5,776,632	+		AO353_26290	0.76	-0.3
5,776,633	-		AO353_26290	0.76	-0.5
5,776,650	-		AO353_26290	0.82	+0.2
5,776,653	+		AO353_26290	0.84	-0.6
5,776,653	+		AO353_26290	0.84	+2.1
5,776,653	+		AO353_26290	0.84	-0.5
5,776,653	+		AO353_26290	0.84	-1.2
5,776,653	+		AO353_26290	0.84	-0.2
5,776,653	+		AO353_26290	0.84	-0.8
5,776,653	+				-0.8
5,776,654	-		AO353_26290	0.84	+1.5
5,776,654	-		AO353_26290	0.84	+0.4
5,776,654	-		AO353_26290	0.84	-0.4
5,776,654	-		AO353_26290	0.84	-0.6
5,776,848	+				+2.1
5,776,849	-				-0.0
5,776,908	+				+1.0
5,776,959	+				+1.5
5,776,960	-				-1.4
5,776,960	-				-0.2
5,776,960	-				-3.3
5,777,017	+		AO353_26295	0.10	-0.6
5,777,034	-		AO353_26295	0.14	+2.6
5,777,034	-		AO353_26295	0.14	+0.3
5,777,043	-		AO353_26295	0.16	-0.8
5,777,077	+		AO353_26295	0.23	+0.6
5,777,077	+		AO353_26295	0.23	+0.3
5,777,077	+		AO353_26295	0.23	-1.2
5,777,077	+		AO353_26295	0.23	-0.2
5,777,078	-		AO353_26295	0.23	+1.3
5,777,078	-		AO353_26295	0.23	-0.1
5,777,078	-		AO353_26295	0.23	-0.1
5,777,078	-		AO353_26295	0.23	+0.8
5,777,078	-		AO353_26295	0.23	-1.3
5,777,078	-		AO353_26295	0.23	-1.2
5,777,078	-		AO353_26295	0.23	-0.4
5,777,078	-		AO353_26295	0.23	-0.3
5,777,078	-		AO353_26295	0.23	+3.2
5,777,081	+		AO353_26295	0.24	-1.1
5,777,081	+		AO353_26295	0.24	+2.2
5,777,081	+		AO353_26295	0.24	+1.0
5,777,081	+		AO353_26295	0.24	-0.8
5,777,082	-		AO353_26295	0.24	+0.6
5,777,082	-		AO353_26295	0.24	+1.8
5,777,082	-				+6.8
5,777,108	+		AO353_26295	0.30	-1.0
5,777,108	+		AO353_26295	0.30	-0.9
5,777,109	-		AO353_26295	0.30	+2.5
5,777,109	-		AO353_26295	0.30	+2.0
5,777,109	-		AO353_26295	0.30	+1.1
5,777,109	-		AO353_26295	0.30	+1.1
5,777,152	+		AO353_26295	0.40	-0.3
5,777,201	+				+1.6
5,777,202	-		AO353_26295	0.51	-1.1
5,777,210	+		AO353_26295	0.52	+0.3
5,777,210	+		AO353_26295	0.52	+1.9
5,777,211	-		AO353_26295	0.53	+0.3
5,777,211	-		AO353_26295	0.53	-0.0
5,777,262	+		AO353_26295	0.64	-1.3
5,777,262	+		AO353_26295	0.64	-1.9
5,777,311	+		AO353_26295	0.75	+1.5
5,777,311	+		AO353_26295	0.75	-2.5
5,777,311	+		AO353_26295	0.75	-0.0
5,777,365	+		AO353_26295	0.86	+1.8
5,777,365	+		AO353_26295	0.86	-1.0
5,777,365	+		AO353_26295	0.86	-1.0
5,777,365	+		AO353_26295	0.86	-1.0
5,777,365	+		AO353_26295	0.86	-0.8
5,777,365	+		AO353_26295	0.86	-1.3
5,777,365	+		AO353_26295	0.86	-0.0
5,777,366	-		AO353_26295	0.87	+0.8
5,777,366	-		AO353_26295	0.87	-1.6
5,777,366	-		AO353_26295	0.87	+0.2
5,777,395	+				-1.5
5,777,396	-				-1.0
5,777,396	-				-1.0
5,777,407	-				-2.7
5,777,439	+				-1.1
5,777,439	+				+2.9
5,777,440	-				-0.4
5,777,440	-				-1.1
5,777,440	-				+1.7
5,777,440	-				-0.5
5,777,553	-				-1.0