Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26270

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
5,774,047	+		AO353_26260	0.68	-0.1
5,774,047	+		AO353_26260	0.68	-1.5
5,774,048	-		AO353_26260	0.68	-1.1
5,774,048	-		AO353_26260	0.68	+0.2
5,774,048	-		AO353_26260	0.68	+8.1
5,774,113	+		AO353_26260	0.80	+0.9
5,774,113	+		AO353_26260	0.80	-0.7
5,774,113	+		AO353_26260	0.80	-0.7
5,774,114	-		AO353_26260	0.81	-0.6
5,774,114	-		AO353_26260	0.81	+0.5
5,774,123	-		AO353_26260	0.82	+0.4
5,774,130	+		AO353_26260	0.84	+0.0
5,774,130	+		AO353_26260	0.84	-0.8
5,774,130	+		AO353_26260	0.84	+0.9
5,774,130	+		AO353_26260	0.84	-0.8
5,774,130	+		AO353_26260	0.84	-0.4
5,774,130	+		AO353_26260	0.84	+0.6
5,774,131	-		AO353_26260	0.84	+1.6
5,774,131	-		AO353_26260	0.84	+1.3
5,774,131	-		AO353_26260	0.84	-1.1
5,774,131	-		AO353_26260	0.84	+0.7
5,774,131	-		AO353_26260	0.84	-2.3
5,774,131	-		AO353_26260	0.84	-1.9
5,774,131	-		AO353_26260	0.84	-1.6
5,774,131	-		AO353_26260	0.84	-3.0
5,774,131	-		AO353_26260	0.84	-1.0
5,774,206	+				+1.4
5,774,206	+				-0.6
5,774,206	+				+0.7
5,774,206	+				-0.6
5,774,206	+				-0.6
5,774,206	+				+0.2
5,774,206	+				+0.5
5,774,207	-				-0.6
5,774,207	-				-1.7
5,774,207	-				-1.0
5,774,215	+				-0.5
5,774,215	+				-0.9
5,774,215	+				+0.5
5,774,215	+				-0.8
5,774,273	+				-0.6
5,774,273	+				+1.2
5,774,274	-				+1.0
5,774,274	-				-0.8
5,774,274	-				+1.7
5,774,274	-				-0.5
5,774,274	-				-0.6
5,774,288	+				+0.6
5,774,301	+				-0.1
5,774,301	+				-0.4
5,774,302	-				-1.2
5,774,332	+				+2.6
5,774,333	-				-1.7
5,774,341	+				+1.2
5,774,341	+				-2.5
5,774,341	+				-1.4
5,774,421	+				-1.4
5,774,421	+				+1.6
5,774,421	+				-0.1
5,774,422	-				+0.6
5,774,422	-				+1.1
5,774,422	-				+1.2
5,774,422	-				+0.0
5,774,422	-				+0.9
5,774,422	-				-1.3
5,774,425	+				+0.9
5,774,425	+				-0.5
5,774,425	+				+0.5
5,774,425	+				+1.8
5,774,425	+				-2.0
5,774,425	+				+1.2
5,774,425	+				+2.0
5,774,425	+				+3.9
5,774,425	+				-0.3
5,774,425	+				+0.6
5,774,425	+				-1.4
5,774,426	-				-0.8
5,774,426	-				-0.0
5,774,426	-				-1.5
5,774,426	-				-1.7
5,774,426	-				+1.2
5,774,426	-				-1.6
5,774,426	-				+1.9
5,774,426	-				-2.3
5,774,456	+				-0.2
5,774,457	-				-0.1
5,774,457	-				-1.3
5,774,490	+				-0.2
5,774,490	+				-0.0
5,774,490	+				+0.7
5,774,499	-				+3.0
5,774,510	+				-1.6
5,774,510	+				+0.6
5,774,510	+				+1.7
5,774,511	-				-1.4
5,774,511	-				+1.4
5,774,536	+				-0.4
5,774,536	+				+0.2
5,774,536	+				-0.7
5,774,537	-				+1.4
5,774,537	-				-0.5
5,774,537	-				-1.4
5,774,558	-				-0.3
5,774,558	-				+4.8
5,774,558	-				-1.8
5,774,558	-				-0.4
5,774,607	+				+1.5
5,774,607	+				-0.3
5,774,607	+				-2.1
5,774,607	+				-0.3
5,774,607	+				-0.0
5,774,607	+				-1.1
5,774,607	+				-1.6
5,774,607	+				-1.1
5,774,608	-				-1.0
5,774,608	-				+0.3
5,774,608	-				+0.5
5,774,661	+				+2.0
5,774,661	+				+0.1
5,774,661	+				-1.4
5,774,661	+				+1.4
5,774,661	+				-0.0
5,774,662	-				+0.2
5,774,761	+				+0.5
5,775,066	+				+1.5
5,775,126	+				-0.5
5,775,126	+				-0.1
5,775,127	-				+0.5
5,775,320	+		AO353_26275	0.16	+0.1
5,775,320	+		AO353_26275	0.16	-1.8
5,775,321	-		AO353_26275	0.17	-1.4
5,775,321	-		AO353_26275	0.17	-0.1
5,775,321	-		AO353_26275	0.17	+0.0
5,775,321	-		AO353_26275	0.17	-1.3
5,775,321	-		AO353_26275	0.17	-0.4
5,775,365	+		AO353_26275	0.34	-0.9
5,775,366	-		AO353_26275	0.34	-2.9
5,775,366	-		AO353_26275	0.34	+1.2
5,775,366	-		AO353_26275	0.34	+1.0
5,775,366	-		AO353_26275	0.34	+0.9
5,775,419	+		AO353_26275	0.54	-1.5
5,775,419	+		AO353_26275	0.54	+0.3
5,775,420	-		AO353_26275	0.55	-2.6
5,775,470	+		AO353_26275	0.74	+0.9
5,775,471	-		AO353_26275	0.74	-1.6
5,775,514	+				-2.2
5,775,514	+				+2.5
5,775,514	+				-2.1
5,775,514	+				-0.4
5,775,515	-				+0.7
5,775,515	-				-0.6
5,775,515	-				-0.0
5,775,515	-				+1.6
5,775,515	-				+0.6
5,775,515	-				+0.2
5,775,515	-				+1.3
5,775,515	-				-0.4
5,775,515	-				+0.8
5,775,515	-				+1.1
5,775,528	+				+4.5
5,775,528	+				-0.2
5,775,647	+		AO353_26280	0.34	-0.7
5,775,648	-		AO353_26280	0.35	-1.0
5,775,756	+				+1.2
5,775,798	+		AO353_26280	0.83	-1.1
5,775,805	+		AO353_26280	0.85	+0.4
5,775,805	+		AO353_26280	0.85	-1.0
5,775,806	-		AO353_26280	0.85	-1.1
5,775,833	+				+0.6
5,775,833	+				-2.3
5,775,834	-				-1.3
5,775,834	-				+1.1
5,775,856	+				+1.1
5,775,857	-				-1.6
5,775,910	+				-1.8
5,775,910	+				-0.1
5,775,910	+				-0.5
5,775,910	+				-2.0
5,775,911	-				-0.1
5,775,911	-				+0.2
5,775,911	-				+1.7
5,775,911	-				+2.2
5,775,938	+				+0.1
5,775,938	+				+0.1
5,775,938	+				-0.5
5,775,939	-				-1.3
5,775,939	-				+1.3
5,775,946	+				-1.4
5,775,946	+				+0.1
5,775,970	+				+1.5
5,775,970	+				-1.1
5,775,970	+				-0.8
5,775,970	+				+1.8
5,775,970	+				-0.6
5,775,971	-				+1.0
5,776,028	+				-1.1
5,776,028	+				-1.4
5,776,028	+				+0.2
5,776,028	+				-0.1
5,776,028	+				-1.8
5,776,028	+				-1.3
5,776,028	+				+0.3
5,776,028	+				-1.1
5,776,029	-				+0.2