Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22015 and AO353_22020 are separated by 28 nucleotides AO353_22020 and AO353_22025 are separated by 75 nucleotides AO353_22025 and AO353_22030 are separated by 154 nucleotides
AO353_22015: AO353_22015 - short-chain dehydrogenase, at 4,821,818 to 4,823,008
_22015
AO353_22020: AO353_22020 - hypothetical protein, at 4,823,037 to 4,823,474
_22020
AO353_22025: AO353_22025 - iron-sulfur cluster repair di-iron protein, at 4,823,550 to 4,824,224
_22025
AO353_22030: AO353_22030 - transcriptional regulator, at 4,824,379 to 4,825,908
_22030
Position (kb)
4823
4824 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.250 kb on + strand, within AO353_22015 at 4822.304 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.509 kb on - strand, within AO353_22015 at 4822.509 kb on - strand, within AO353_22015 at 4822.509 kb on - strand, within AO353_22015 at 4822.652 kb on + strand, within AO353_22015 at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.041 kb on - strand at 4823.041 kb on - strand at 4823.047 kb on - strand at 4823.047 kb on - strand at 4823.047 kb on - strand at 4823.190 kb on - strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.220 kb on + strand, within AO353_22020 at 4823.221 kb on - strand, within AO353_22020 at 4823.221 kb on - strand, within AO353_22020 at 4823.221 kb on - strand, within AO353_22020 at 4823.291 kb on + strand, within AO353_22020 at 4823.291 kb on + strand, within AO353_22020 at 4823.291 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.460 kb on + strand at 4823.460 kb on + strand at 4823.461 kb on - strand at 4823.492 kb on + strand at 4823.493 kb on - strand at 4823.685 kb on + strand, within AO353_22025 at 4823.685 kb on + strand, within AO353_22025 at 4823.685 kb on + strand at 4823.686 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.235 kb on + strand at 4824.236 kb on - strand at 4824.236 kb on - strand at 4824.236 kb on - strand at 4824.282 kb on + strand at 4824.315 kb on + strand at 4824.327 kb on + strand at 4824.327 kb on + strand at 4824.328 kb on - strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.368 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.373 kb on - strand at 4824.373 kb on - strand at 4824.375 kb on + strand at 4824.375 kb on + strand at 4824.375 kb on + strand at 4824.376 kb on - strand at 4824.466 kb on + strand at 4824.466 kb on + strand at 4824.467 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,822,246 + AO353_22015 0.36 +0.9 4,822,246 + AO353_22015 0.36 -0.9 4,822,246 + AO353_22015 0.36 +0.0 4,822,246 + AO353_22015 0.36 -1.1 4,822,246 + AO353_22015 0.36 +0.3 4,822,246 + AO353_22015 0.36 -0.7 4,822,246 + AO353_22015 0.36 -0.6 4,822,246 + AO353_22015 0.36 -0.7 4,822,246 + AO353_22015 0.36 -1.6 4,822,247 - AO353_22015 0.36 +0.1 4,822,247 - AO353_22015 0.36 -0.1 4,822,247 - AO353_22015 0.36 -0.9 4,822,247 - AO353_22015 0.36 +0.2 4,822,247 - AO353_22015 0.36 -0.6 4,822,247 - AO353_22015 0.36 -0.2 4,822,250 + AO353_22015 0.36 -0.4 4,822,304 + AO353_22015 0.41 +1.4 4,822,508 + AO353_22015 0.58 -1.1 4,822,508 + AO353_22015 0.58 +1.1 4,822,508 + AO353_22015 0.58 -1.2 4,822,508 + AO353_22015 0.58 -0.1 4,822,509 - AO353_22015 0.58 +0.0 4,822,509 - AO353_22015 0.58 +0.4 4,822,509 - AO353_22015 0.58 -2.2 4,822,652 + AO353_22015 0.70 -2.1 4,823,040 + +0.1 4,823,040 + -0.8 4,823,040 + -0.1 4,823,040 + +0.8 4,823,040 + +1.6 4,823,040 + -0.1 4,823,040 + -1.4 4,823,040 + -1.7 4,823,040 + -0.8 4,823,040 + -0.4 4,823,040 + -1.7 4,823,041 - +2.1 4,823,041 - -0.7 4,823,047 - -0.7 4,823,047 - -0.1 4,823,047 - -0.9 4,823,190 - AO353_22020 0.35 -1.7 4,823,218 + AO353_22020 0.41 -2.2 4,823,218 + AO353_22020 0.41 +2.5 4,823,218 + AO353_22020 0.41 +0.7 4,823,218 + AO353_22020 0.41 -1.6 4,823,218 + AO353_22020 0.41 -0.1 4,823,218 + AO353_22020 0.41 -0.6 4,823,218 + AO353_22020 0.41 +0.7 4,823,218 + AO353_22020 0.41 +0.3 4,823,219 - AO353_22020 0.42 -0.1 4,823,219 - AO353_22020 0.42 +1.5 4,823,219 - AO353_22020 0.42 +0.4 4,823,219 - AO353_22020 0.42 -3.0 4,823,219 - AO353_22020 0.42 +0.7 4,823,219 - AO353_22020 0.42 -0.6 4,823,219 - AO353_22020 0.42 +0.3 4,823,220 + AO353_22020 0.42 +1.4 4,823,221 - AO353_22020 0.42 -0.4 4,823,221 - AO353_22020 0.42 -1.2 4,823,221 - AO353_22020 0.42 -2.3 4,823,291 + AO353_22020 0.58 -1.4 4,823,291 + AO353_22020 0.58 -1.0 4,823,291 + AO353_22020 0.58 +0.7 4,823,340 + AO353_22020 0.69 -1.3 4,823,340 + AO353_22020 0.69 -0.9 4,823,340 + AO353_22020 0.69 -1.5 4,823,340 + AO353_22020 0.69 -1.1 4,823,341 - AO353_22020 0.69 -0.8 4,823,341 - AO353_22020 0.69 -1.2 4,823,341 - AO353_22020 0.69 -0.1 4,823,341 - AO353_22020 0.69 -0.3 4,823,341 - AO353_22020 0.69 -0.3 4,823,460 + -2.5 4,823,460 + -1.6 4,823,461 - -0.1 4,823,492 + -1.0 4,823,493 - -1.2 4,823,685 + AO353_22025 0.20 -1.2 4,823,685 + AO353_22025 0.20 -0.6 4,823,685 + +1.7 4,823,686 - AO353_22025 0.20 -0.3 4,824,150 - AO353_22025 0.89 -0.3 4,824,150 - AO353_22025 0.89 -1.6 4,824,150 - AO353_22025 0.89 +0.6 4,824,235 + -0.2 4,824,236 - -0.7 4,824,236 - +1.0 4,824,236 - -0.3 4,824,282 + -1.1 4,824,315 + -0.3 4,824,327 + -0.9 4,824,327 + +0.7 4,824,328 - +1.3 4,824,361 + +2.0 4,824,361 + -2.9 4,824,361 + -0.7 4,824,361 + -1.2 4,824,362 - -0.3 4,824,362 - +1.8 4,824,362 - +0.6 4,824,362 - +0.0 4,824,368 + -2.1 4,824,372 + -0.2 4,824,372 + +0.7 4,824,372 + +2.1 4,824,372 + -0.9 4,824,372 + +0.8 4,824,372 + -0.2 4,824,372 + +2.3 4,824,373 - +0.5 4,824,373 - -0.3 4,824,375 + +0.2 4,824,375 + +0.8 4,824,375 + +1.2 4,824,376 - -0.6 4,824,466 + +2.4 4,824,466 + +2.1 4,824,467 - +0.0
Or see this region's nucleotide sequence