Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21875

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,796,438	-				-0.9
4,796,498	+		AO353_21870	0.11	+1.7
4,796,498	+				-0.7
4,796,498	+		AO353_21870	0.11	+1.0
4,796,498	+		AO353_21870	0.11	+0.3
4,796,498	+		AO353_21870	0.11	+0.0
4,796,498	+		AO353_21870	0.11	-0.1
4,796,499	-		AO353_21870	0.12	+0.3
4,796,499	-		AO353_21870	0.12	-2.5
4,796,499	-		AO353_21870	0.12	+1.4
4,796,499	-		AO353_21870	0.12	-0.1
4,796,499	-		AO353_21870	0.12	-1.9
4,796,499	-		AO353_21870	0.12	-0.1
4,796,499	-		AO353_21870	0.12	+0.3
4,796,499	-		AO353_21870	0.12	+0.4
4,796,499	-		AO353_21870	0.12	+0.3
4,796,499	-		AO353_21870	0.12	+0.8
4,796,569	+		AO353_21870	0.19	+1.3
4,796,574	+		AO353_21870	0.20	-1.7
4,796,657	-		AO353_21870	0.28	-1.8
4,796,710	+		AO353_21870	0.34	+1.1
4,796,710	+		AO353_21870	0.34	-0.6
4,796,710	+		AO353_21870	0.34	+0.4
4,796,710	+		AO353_21870	0.34	+0.1
4,796,711	-		AO353_21870	0.34	+0.3
4,796,724	+		AO353_21870	0.35	+0.4
4,796,724	+		AO353_21870	0.35	+0.4
4,796,725	-		AO353_21870	0.35	+0.3
4,796,725	-		AO353_21870	0.35	-1.2
4,796,772	+		AO353_21870	0.40	+1.3
4,796,772	+		AO353_21870	0.40	-0.2
4,796,773	-		AO353_21870	0.41	-1.5
4,796,817	+		AO353_21870	0.45	+1.6
4,796,817	+		AO353_21870	0.45	-1.3
4,796,817	+		AO353_21870	0.45	-0.1
4,796,818	-		AO353_21870	0.45	-1.6
4,796,818	-		AO353_21870	0.45	+1.1
4,796,818	-		AO353_21870	0.45	+2.0
4,796,869	+		AO353_21870	0.51	-2.4
4,796,870	-		AO353_21870	0.51	+0.9
4,796,938	-		AO353_21870	0.58	+0.9
4,796,996	-		AO353_21870	0.64	+1.1
4,797,076	-		AO353_21870	0.72	+1.8
4,797,077	+		AO353_21870	0.73	-0.7
4,797,077	+		AO353_21870	0.73	+0.7
4,797,077	+		AO353_21870	0.73	-0.6
4,797,077	+		AO353_21870	0.73	-1.7
4,797,077	+		AO353_21870	0.73	-0.8
4,797,077	+		AO353_21870	0.73	-1.1
4,797,078	-		AO353_21870	0.73	+0.2
4,797,078	-		AO353_21870	0.73	+1.3
4,797,078	-		AO353_21870	0.73	-1.7
4,797,078	-		AO353_21870	0.73	-1.8
4,797,078	-		AO353_21870	0.73	+2.3
4,797,078	-		AO353_21870	0.73	+0.3
4,797,078	-		AO353_21870	0.73	-0.7
4,797,131	+		AO353_21870	0.78	-0.2
4,797,131	+		AO353_21870	0.78	-0.3
4,797,132	-		AO353_21870	0.78	+1.7
4,797,132	-		AO353_21870	0.78	+0.1
4,797,132	-		AO353_21870	0.78	+2.4
4,797,161	+		AO353_21870	0.81	+0.3
4,797,162	-		AO353_21870	0.82	+1.8
4,797,342	-				+0.7
4,797,371	-				-2.7
4,797,383	+				+0.7
4,797,383	+				-0.6
4,797,383	+				-1.9
4,797,384	-				-0.1
4,797,384	-				-1.0
4,797,402	-				-0.3
4,797,411	+				+0.1
4,797,412	-				-0.1
4,797,412	-				-0.7
4,797,412	-				-3.1
4,797,412	-				+0.7
4,797,421	-				-0.7
4,797,465	+		AO353_21875	0.14	+0.8
4,797,466	-		AO353_21875	0.14	-1.2
4,797,578	+		AO353_21875	0.27	+2.3
4,797,578	+		AO353_21875	0.27	+0.1
4,797,578	+		AO353_21875	0.27	+1.9
4,797,578	+		AO353_21875	0.27	-1.2
4,797,579	-		AO353_21875	0.27	-1.3
4,797,579	-		AO353_21875	0.27	-0.3
4,797,611	+		AO353_21875	0.31	-1.8
4,797,611	+		AO353_21875	0.31	-1.1
4,797,611	+		AO353_21875	0.31	+0.7
4,797,612	-		AO353_21875	0.31	+0.9
4,797,612	-		AO353_21875	0.31	-1.4
4,797,612	-		AO353_21875	0.31	-1.5
4,797,612	-		AO353_21875	0.31	-0.1
4,797,631	-		AO353_21875	0.33	+2.6
4,797,631	-				+0.7
4,797,686	+		AO353_21875	0.39	-0.9
4,797,687	-		AO353_21875	0.39	+1.9
4,797,687	-		AO353_21875	0.39	-2.9
4,797,687	-		AO353_21875	0.39	-1.7
4,797,713	+		AO353_21875	0.42	+0.4
4,797,778	+		AO353_21875	0.49	-0.8
4,797,881	+		AO353_21875	0.61	-0.2
4,797,882	-		AO353_21875	0.61	-1.6
4,797,882	-		AO353_21875	0.61	-0.8
4,797,925	+		AO353_21875	0.66	+0.1
4,797,925	+		AO353_21875	0.66	-0.1
4,797,925	+		AO353_21875	0.66	-0.7
4,797,925	+		AO353_21875	0.66	-0.6
4,797,925	+		AO353_21875	0.66	+1.2
4,797,925	+		AO353_21875	0.66	-0.3
4,797,925	+		AO353_21875	0.66	-2.4
4,797,925	+		AO353_21875	0.66	+0.9
4,797,926	-		AO353_21875	0.66	-1.3
4,797,926	-		AO353_21875	0.66	+0.7
4,797,926	-		AO353_21875	0.66	-1.4
4,797,926	-		AO353_21875	0.66	+1.6
4,797,926	-		AO353_21875	0.66	-1.8
4,797,926	-		AO353_21875	0.66	-0.2
4,797,926	-		AO353_21875	0.66	+0.6
4,797,926	-		AO353_21875	0.66	+0.1
4,797,926	-		AO353_21875	0.66	+1.3
4,797,926	-		AO353_21875	0.66	+0.1
4,797,926	-		AO353_21875	0.66	-0.9
4,797,926	-		AO353_21875	0.66	-0.7
4,797,926	-		AO353_21875	0.66	-0.6
4,797,926	-		AO353_21875	0.66	-0.1
4,797,928	+		AO353_21875	0.66	+0.7
4,797,928	+		AO353_21875	0.66	+0.6
4,797,929	-		AO353_21875	0.66	-0.1
4,797,929	-		AO353_21875	0.66	-0.7
4,797,929	-		AO353_21875	0.66	-1.1
4,797,974	+		AO353_21875	0.71	-1.2
4,797,974	+		AO353_21875	0.71	+0.1
4,797,981	+		AO353_21875	0.72	-2.0
4,797,982	-		AO353_21875	0.72	-0.7
4,798,030	+		AO353_21875	0.78	+0.2
4,798,030	+		AO353_21875	0.78	+0.4
4,798,031	-				+1.7
4,798,031	-		AO353_21875	0.78	-1.7
4,798,031	-		AO353_21875	0.78	-2.3
4,798,031	-		AO353_21875	0.78	+2.8
4,798,031	-		AO353_21875	0.78	+0.9
4,798,090	+		AO353_21875	0.84	-1.3
4,798,090	+		AO353_21875	0.84	+1.7
4,798,090	+		AO353_21875	0.84	-2.7
4,798,090	+		AO353_21875	0.84	-0.7
4,798,090	+		AO353_21875	0.84	-0.4
4,798,091	-		AO353_21875	0.85	-1.3
4,798,091	-		AO353_21875	0.85	-0.9
4,798,094	+		AO353_21875	0.85	-1.3
4,798,094	+				-0.1
4,798,094	+		AO353_21875	0.85	-0.9
4,798,094	+		AO353_21875	0.85	+0.3
4,798,095	-		AO353_21875	0.85	-0.6
4,798,095	-		AO353_21875	0.85	+0.3
4,798,095	-		AO353_21875	0.85	-0.6
4,798,194	+				+1.0
4,798,194	+				-0.3
4,798,194	+				-0.7
4,798,194	+				-1.0
4,798,194	+				+0.5
4,798,194	+				+0.5
4,798,194	+				+0.3
4,798,195	-				-0.4
4,798,195	-				+0.3
4,798,195	-				-0.4
4,798,195	-				-1.8
4,798,195	-				-0.4
4,798,231	+				-0.2
4,798,231	+				-0.6
4,798,232	-				-0.9
4,798,265	+				-0.9
4,798,265	+				-0.7
4,798,266	-				+2.3
4,798,266	-				-1.0
4,798,266	-				-1.0
4,798,266	-				-0.9
4,798,287	+				-0.7
4,798,288	-				-0.9
4,798,288	-				-0.1
4,798,309	+				+1.7
4,798,309	+				-0.6
4,798,310	-				-1.0
4,798,314	+				+0.7
4,798,314	+				-2.1
4,798,314	+				-0.2
4,798,315	-				+1.8
4,798,315	-				-0.0
4,798,326	+				-1.9
4,798,326	+				+1.3
4,798,326	+				-1.4
4,798,326	+				-1.4
4,798,327	-				+1.9
4,798,327	-				-0.9
4,798,327	-				-0.4
4,798,327	-				-0.1
4,798,365	+				+0.7
4,798,365	+				-0.6
4,798,365	+				-0.9
4,798,365	+				+0.1
4,798,366	-				-0.7
4,798,366	-				+0.4
4,798,366	-				+5.6
4,798,366	-				-3.1
4,798,366	-				-0.3
4,798,366	-				-1.2
4,798,391	+				+0.2
4,798,391	+				-3.2
4,798,391	+				-0.5
4,798,392	-				-1.3
4,798,392	-				-0.3
4,798,392	-				-0.1
4,798,395	-				+0.2
4,798,524	+		AO353_21880	0.15	-1.7
4,798,524	+		AO353_21880	0.15	+1.0
4,798,524	+		AO353_21880	0.15	-0.6
4,798,530	+		AO353_21880	0.16	-1.7
4,798,530	+		AO353_21880	0.16	+0.1
4,798,531	-		AO353_21880	0.16	-2.1
4,798,531	-		AO353_21880	0.16	+2.0
4,798,531	-		AO353_21880	0.16	+2.6
4,798,531	-		AO353_21880	0.16	+2.8
4,798,636	-		AO353_21880	0.30	+4.0
4,798,636	-		AO353_21880	0.30	-0.3
4,798,638	+		AO353_21880	0.30	-2.1
4,798,639	-		AO353_21880	0.30	-0.3
4,798,639	-		AO353_21880	0.30	-1.7
4,798,639	-		AO353_21880	0.30	+0.3
4,798,639	-		AO353_21880	0.30	+0.3
4,798,698	+		AO353_21880	0.38	-0.9
4,798,699	-		AO353_21880	0.38	-0.7
4,798,720	+		AO353_21880	0.41	-0.4
4,798,721	-		AO353_21880	0.41	-1.9
4,798,764	+		AO353_21880	0.46	-1.1
4,798,764	+		AO353_21880	0.46	-1.6
4,798,764	+		AO353_21880	0.46	-1.7
4,798,764	+		AO353_21880	0.46	-0.1
4,798,764	+		AO353_21880	0.46	-1.9
4,798,764	+		AO353_21880	0.46	+4.0
4,798,765	-		AO353_21880	0.47	+1.8
4,798,765	-		AO353_21880	0.47	+2.1
4,798,765	-		AO353_21880	0.47	+0.9
4,798,814	-		AO353_21880	0.53	+0.1
4,798,874	-		AO353_21880	0.61	-1.1
4,798,938	+		AO353_21880	0.69	-0.3
4,799,102	+				-1.2
4,799,103	-				-0.6
4,799,103	-				-1.3
4,799,103	-				+0.0
4,799,103	-				-1.1
4,799,103	-				-1.0
4,799,103	-				+1.4
4,799,103	-				-0.2
4,799,175	-				-0.3
4,799,187	-				-0.8
4,799,199	-				+0.8
4,799,202	+				+0.4
4,799,202	+				+2.0
4,799,202	+				+0.0
4,799,202	+				-1.1
4,799,202	+				+0.1
4,799,203	-				-0.6