Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21860

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,793,585	+				-2.3
4,793,586	-				-0.7
4,793,588	-				-0.7
4,793,805	+		AO353_21855	0.23	+0.9
4,793,805	+		AO353_21855	0.23	-0.6
4,793,805	+		AO353_21855	0.23	-1.3
4,793,805	+		AO353_21855	0.23	+1.3
4,793,806	-		AO353_21855	0.23	+0.1
4,793,807	+		AO353_21855	0.23	-2.3
4,793,807	+		AO353_21855	0.23	+2.6
4,793,808	-		AO353_21855	0.23	-0.4
4,793,830	+		AO353_21855	0.25	+0.7
4,793,870	+		AO353_21855	0.29	+2.6
4,793,870	+		AO353_21855	0.29	-1.7
4,793,870	+		AO353_21855	0.29	+1.8
4,793,871	-		AO353_21855	0.30	-0.1
4,793,871	-		AO353_21855	0.30	+0.9
4,793,871	-		AO353_21855	0.30	-1.1
4,793,871	-		AO353_21855	0.30	+0.6
4,793,871	-		AO353_21855	0.30	-1.6
4,793,871	-		AO353_21855	0.30	+1.1
4,793,881	+		AO353_21855	0.31	+0.7
4,794,063	+		AO353_21855	0.49	-0.6
4,794,063	+		AO353_21855	0.49	-0.4
4,794,064	-		AO353_21855	0.49	-0.8
4,794,064	-		AO353_21855	0.49	-0.7
4,794,067	+		AO353_21855	0.50	+0.3
4,794,067	+		AO353_21855	0.50	+2.5
4,794,067	+		AO353_21855	0.50	-1.4
4,794,067	+		AO353_21855	0.50	+1.1
4,794,067	+		AO353_21855	0.50	-0.4
4,794,068	-		AO353_21855	0.50	+2.4
4,794,068	-		AO353_21855	0.50	+0.5
4,794,068	-		AO353_21855	0.50	-2.5
4,794,068	-				-0.3
4,794,202	+		AO353_21855	0.64	-2.1
4,794,202	+		AO353_21855	0.64	-1.5
4,794,202	+		AO353_21855	0.64	-1.7
4,794,251	+		AO353_21855	0.69	-0.3
4,794,251	+		AO353_21855	0.69	+0.6
4,794,251	+		AO353_21855	0.69	+0.5
4,794,266	-		AO353_21855	0.70	+0.9
4,794,340	+		AO353_21855	0.78	-0.1
4,794,340	+		AO353_21855	0.78	+0.3
4,794,340	+		AO353_21855	0.78	+1.0
4,794,340	+		AO353_21855	0.78	-0.2
4,794,341	-		AO353_21855	0.78	+0.3
4,794,341	-		AO353_21855	0.78	-1.2
4,794,341	-		AO353_21855	0.78	-2.0
4,794,341	-		AO353_21855	0.78	+1.4
4,794,341	-		AO353_21855	0.78	+2.5
4,794,358	-		AO353_21855	0.80	-1.9
4,794,358	-		AO353_21855	0.80	+1.4
4,794,555	+				-1.4
4,794,555	+				+1.3
4,794,555	+				+0.5
4,794,556	-				-0.6
4,794,556	-				-1.7
4,794,556	-				+1.4
4,794,619	-				+2.7
4,794,783	-		AO353_21860	0.23	-1.1
4,794,785	-		AO353_21860	0.24	+0.9
4,794,785	-		AO353_21860	0.24	-1.8
4,794,807	+		AO353_21860	0.26	-1.9
4,794,807	+		AO353_21860	0.26	+0.2
4,794,807	+		AO353_21860	0.26	-0.2
4,794,808	-		AO353_21860	0.26	-0.6
4,794,808	-		AO353_21860	0.26	-2.2
4,794,808	-		AO353_21860	0.26	+1.6
4,794,847	+		AO353_21860	0.30	-1.0
4,794,847	+		AO353_21860	0.30	-2.6
4,794,847	+		AO353_21860	0.30	-0.1
4,794,847	+		AO353_21860	0.30	+0.3
4,794,847	+		AO353_21860	0.30	-2.5
4,794,847	+		AO353_21860	0.30	+1.3
4,794,847	+		AO353_21860	0.30	-0.1
4,794,848	-		AO353_21860	0.30	+2.6
4,794,848	-		AO353_21860	0.30	+0.3
4,794,848	-		AO353_21860	0.30	-0.5
4,794,848	-		AO353_21860	0.30	-3.3
4,794,848	-		AO353_21860	0.30	+1.4
4,794,848	-		AO353_21860	0.30	+1.0
4,794,848	-		AO353_21860	0.30	-0.4
4,794,848	-		AO353_21860	0.30	+0.3
4,794,848	-		AO353_21860	0.30	+0.7
4,794,848	-		AO353_21860	0.30	-1.9
4,794,848	-		AO353_21860	0.30	-1.7
4,795,081	+		AO353_21860	0.54	+0.9
4,795,081	+		AO353_21860	0.54	-0.6
4,795,081	+		AO353_21860	0.54	+2.1
4,795,081	+		AO353_21860	0.54	-2.4
4,795,082	-		AO353_21860	0.54	-0.7
4,795,082	-		AO353_21860	0.54	-0.3
4,795,082	-		AO353_21860	0.54	-0.7
4,795,272	+		AO353_21860	0.73	-0.7
4,795,272	+		AO353_21860	0.73	-1.5
4,795,273	-		AO353_21860	0.73	-1.3
4,795,273	-		AO353_21860	0.73	+0.3
4,795,273	-		AO353_21860	0.73	-0.6
4,795,273	-		AO353_21860	0.73	+1.1
4,795,273	-		AO353_21860	0.73	-0.2
4,795,273	-		AO353_21860	0.73	+0.7
4,795,273	-		AO353_21860	0.73	-2.1
4,795,302	+		AO353_21860	0.76	-0.6
4,795,302	+		AO353_21860	0.76	-1.1
4,795,392	-		AO353_21860	0.85	-1.2
4,795,392	-		AO353_21860	0.85	-0.3
4,795,392	-		AO353_21860	0.85	-1.4
4,795,419	+		AO353_21860	0.88	-0.0
4,795,465	-				-0.9
4,795,465	-				+1.0
4,795,532	+				+1.4
4,795,533	-				+0.0
4,795,648	+		AO353_21865	0.13	+0.6
4,795,649	-		AO353_21865	0.13	-0.7
4,795,649	-		AO353_21865	0.13	+0.5
4,795,716	+		AO353_21865	0.21	-0.6
4,795,716	+		AO353_21865	0.21	-1.7
4,795,905	+		AO353_21865	0.43	+2.3
4,795,905	+		AO353_21865	0.43	-0.7
4,795,905	+		AO353_21865	0.43	+0.9
4,795,905	+		AO353_21865	0.43	-2.6
4,795,906	-		AO353_21865	0.43	-0.6
4,795,906	-		AO353_21865	0.43	-0.7
4,795,906	-		AO353_21865	0.43	-0.8
4,795,906	-		AO353_21865	0.43	+1.1
4,795,906	-		AO353_21865	0.43	+2.0
4,795,923	-		AO353_21865	0.45	-2.1
4,795,923	-		AO353_21865	0.45	+0.4
4,795,938	+		AO353_21865	0.47	-0.4
4,795,938	+		AO353_21865	0.47	-2.4
4,795,938	+		AO353_21865	0.47	-0.4
4,795,938	+		AO353_21865	0.47	-0.9
4,795,938	+		AO353_21865	0.47	-0.5
4,795,938	+		AO353_21865	0.47	+0.5
4,795,938	+		AO353_21865	0.47	+1.8
4,795,938	+		AO353_21865	0.47	-1.7
4,795,938	+		AO353_21865	0.47	+1.0
4,795,939	-		AO353_21865	0.47	-1.4
4,795,939	-		AO353_21865	0.47	+0.8
4,795,939	-		AO353_21865	0.47	-1.1
4,795,939	-		AO353_21865	0.47	-0.9
4,795,939	-		AO353_21865	0.47	+0.8
4,795,939	-		AO353_21865	0.47	+1.0
4,795,939	-		AO353_21865	0.47	+1.3
4,795,939	-		AO353_21865	0.47	-0.2
4,796,077	+		AO353_21865	0.63	-0.5
4,796,077	+		AO353_21865	0.63	-1.4
4,796,111	+		AO353_21865	0.67	+0.2
4,796,111	+		AO353_21865	0.67	+0.8
4,796,111	+		AO353_21865	0.67	+0.3
4,796,111	+		AO353_21865	0.67	+1.0
4,796,111	+		AO353_21865	0.67	+2.0
4,796,111	+		AO353_21865	0.67	+2.8
4,796,111	+		AO353_21865	0.67	+0.0
4,796,111	+		AO353_21865	0.67	+0.8
4,796,111	+		AO353_21865	0.67	+1.3
4,796,111	+		AO353_21865	0.67	+0.5
4,796,111	+		AO353_21865	0.67	+1.0
4,796,111	+		AO353_21865	0.67	+1.8
4,796,111	+		AO353_21865	0.67	+2.8
4,796,111	+		AO353_21865	0.67	-0.7
4,796,112	-		AO353_21865	0.67	+1.8
4,796,112	-		AO353_21865	0.67	+1.0
4,796,112	-		AO353_21865	0.67	-0.6
4,796,112	-		AO353_21865	0.67	-0.9
4,796,112	-		AO353_21865	0.67	+3.2
4,796,112	-		AO353_21865	0.67	+1.4
4,796,112	-		AO353_21865	0.67	+0.3
4,796,114	-		AO353_21865	0.67	-0.2
4,796,114	-		AO353_21865	0.67	-1.0
4,796,120	+		AO353_21865	0.68	+0.4
4,796,179	+		AO353_21865	0.75	+1.4
4,796,179	+		AO353_21865	0.75	-0.1
4,796,180	-		AO353_21865	0.75	-0.2
4,796,297	+		AO353_21865	0.89	+2.3
4,796,298	-		AO353_21865	0.89	-0.2
4,796,298	-		AO353_21865	0.89	-0.6
4,796,298	-		AO353_21865	0.89	+0.5
4,796,438	-				-0.9
4,796,498	+		AO353_21870	0.11	+1.7
4,796,498	+				-0.7
4,796,498	+		AO353_21870	0.11	+1.0
4,796,498	+		AO353_21870	0.11	+0.3
4,796,498	+		AO353_21870	0.11	+0.0
4,796,498	+		AO353_21870	0.11	-0.1
4,796,499	-		AO353_21870	0.12	+0.3
4,796,499	-		AO353_21870	0.12	-2.5
4,796,499	-		AO353_21870	0.12	+1.4
4,796,499	-		AO353_21870	0.12	-0.1
4,796,499	-		AO353_21870	0.12	-1.9
4,796,499	-		AO353_21870	0.12	-0.1
4,796,499	-		AO353_21870	0.12	+0.3
4,796,499	-		AO353_21870	0.12	+0.4
4,796,499	-		AO353_21870	0.12	+0.3
4,796,499	-		AO353_21870	0.12	+0.8