Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19495 and AO353_19500 overlap by 11 nucleotides AO353_19500 and AO353_19505 overlap by 4 nucleotides
AO353_19495: AO353_19495 - ABC transporter ATP-binding protein, at 4,271,724 to 4,273,442
_19495
AO353_19500: AO353_19500 - peptidase S8 and S53 subtilisin kexin sedolisin, at 4,273,432 to 4,274,109
_19500
AO353_19505: AO353_19505 - FAD-dependent oxidoreductase, at 4,274,106 to 4,275,401
_19505
Position (kb) 4273
4274
4275 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4272.456 kb on + strand, within AO353_19495 at 4272.456 kb on + strand, within AO353_19495 at 4272.457 kb on - strand, within AO353_19495 at 4272.457 kb on - strand, within AO353_19495 at 4272.469 kb on + strand, within AO353_19495 at 4272.470 kb on - strand, within AO353_19495 at 4272.470 kb on - strand, within AO353_19495 at 4272.561 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.824 kb on - strand, within AO353_19495 at 4273.063 kb on - strand, within AO353_19495 at 4273.334 kb on + strand at 4273.334 kb on + strand at 4273.334 kb on + strand at 4273.334 kb on + strand at 4273.421 kb on + strand at 4273.421 kb on + strand at 4273.421 kb on + strand at 4273.421 kb on + strand at 4273.422 kb on - strand at 4273.422 kb on - strand at 4273.422 kb on - strand at 4273.422 kb on - strand at 4273.446 kb on - strand at 4273.517 kb on - strand, within AO353_19500 at 4273.951 kb on + strand, within AO353_19500 at 4273.951 kb on + strand, within AO353_19500 at 4273.951 kb on + strand, within AO353_19500 at 4273.952 kb on - strand, within AO353_19500 at 4273.952 kb on - strand, within AO353_19500 at 4273.952 kb on - strand, within AO353_19500 at 4274.178 kb on + strand at 4274.680 kb on - strand, within AO353_19505 at 4274.742 kb on + strand, within AO353_19505 at 4274.743 kb on - strand, within AO353_19505 at 4274.743 kb on - strand, within AO353_19505 at 4274.984 kb on + strand, within AO353_19505 at 4275.075 kb on + strand, within AO353_19505 at 4275.076 kb on - strand, within AO353_19505 at 4275.076 kb on - strand, within AO353_19505
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,272,456 + AO353_19495 0.43 -1.0 4,272,456 + AO353_19495 0.43 -0.8 4,272,457 - AO353_19495 0.43 -0.4 4,272,457 - AO353_19495 0.43 +1.7 4,272,469 + AO353_19495 0.43 -2.6 4,272,470 - AO353_19495 0.43 +0.4 4,272,470 - AO353_19495 0.43 +0.0 4,272,561 + AO353_19495 0.49 +0.8 4,272,615 + AO353_19495 0.52 +1.2 4,272,615 + AO353_19495 0.52 -2.0 4,272,615 + AO353_19495 0.52 -2.2 4,272,615 + AO353_19495 0.52 +0.4 4,272,660 + AO353_19495 0.54 -1.5 4,272,660 + AO353_19495 0.54 +0.4 4,272,660 + AO353_19495 0.54 -2.0 4,272,660 + AO353_19495 0.54 +0.6 4,272,660 + AO353_19495 0.54 +0.2 4,272,660 + AO353_19495 0.54 -1.1 4,272,661 - AO353_19495 0.55 -1.2 4,272,661 - AO353_19495 0.55 -0.7 4,272,661 - AO353_19495 0.55 -1.9 4,272,661 - AO353_19495 0.55 +1.4 4,272,661 - AO353_19495 0.55 -0.8 4,272,661 - AO353_19495 0.55 -0.2 4,272,824 - AO353_19495 0.64 +1.9 4,273,063 - AO353_19495 0.78 -1.3 4,273,334 + +0.0 4,273,334 + +1.5 4,273,334 + +0.8 4,273,334 + -1.2 4,273,421 + +1.3 4,273,421 + +0.2 4,273,421 + +0.0 4,273,421 + +3.0 4,273,422 - -0.2 4,273,422 - +0.8 4,273,422 - -1.8 4,273,422 - +1.1 4,273,446 - +1.2 4,273,517 - AO353_19500 0.13 -0.8 4,273,951 + AO353_19500 0.77 -0.4 4,273,951 + AO353_19500 0.77 -1.2 4,273,951 + AO353_19500 0.77 -0.6 4,273,952 - AO353_19500 0.77 +1.9 4,273,952 - AO353_19500 0.77 -1.6 4,273,952 - AO353_19500 0.77 -1.9 4,274,178 + -0.4 4,274,680 - AO353_19505 0.44 -1.4 4,274,742 + AO353_19505 0.49 +0.3 4,274,743 - AO353_19505 0.49 +0.8 4,274,743 - AO353_19505 0.49 +1.4 4,274,984 + AO353_19505 0.68 -0.8 4,275,075 + AO353_19505 0.75 +0.2 4,275,076 - AO353_19505 0.75 +0.9 4,275,076 - AO353_19505 0.75 +0.8
Or see this region's nucleotide sequence