Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08595

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,888,575	+		AO353_08590	0.77	-1.1
1,888,575	+		AO353_08590	0.77	-0.7
1,888,575	+		AO353_08590	0.77	-2.2
1,888,575	+		AO353_08590	0.77	-1.5
1,888,575	+		AO353_08590	0.77	-1.4
1,888,575	+		AO353_08590	0.77	-1.1
1,888,575	+		AO353_08590	0.77	-0.6
1,888,576	-		AO353_08590	0.77	+0.2
1,888,576	-		AO353_08590	0.77	-2.7
1,888,576	-		AO353_08590	0.77	-2.0
1,888,576	-		AO353_08590	0.77	-0.7
1,888,576	-		AO353_08590	0.77	+0.1
1,888,576	-		AO353_08590	0.77	-1.5
1,888,628	+		AO353_08590	0.81	-2.2
1,888,686	+		AO353_08590	0.85	-2.2
1,888,686	+		AO353_08590	0.85	+0.7
1,888,687	-		AO353_08590	0.85	-1.7
1,888,689	+		AO353_08590	0.85	+0.1
1,888,689	+		AO353_08590	0.85	+0.1
1,888,689	+		AO353_08590	0.85	-2.1
1,888,689	+		AO353_08590	0.85	+0.2
1,888,689	+		AO353_08590	0.85	-0.7
1,888,689	+		AO353_08590	0.85	-1.0
1,888,689	+		AO353_08590	0.85	-1.5
1,888,689	+		AO353_08590	0.85	-0.6
1,888,690	-		AO353_08590	0.85	-1.9
1,888,690	-		AO353_08590	0.85	+1.2
1,888,690	-		AO353_08590	0.85	-3.8
1,888,690	-		AO353_08590	0.85	-3.4
1,888,690	-		AO353_08590	0.85	-0.4
1,888,690	-		AO353_08590	0.85	-1.8
1,888,690	-		AO353_08590	0.85	-2.2
1,888,707	+		AO353_08590	0.86	+0.5
1,888,707	+		AO353_08590	0.86	-1.9
1,888,707	+		AO353_08590	0.86	-1.4
1,888,707	+		AO353_08590	0.86	-2.2
1,888,707	+		AO353_08590	0.86	-1.4
1,888,707	+		AO353_08590	0.86	+0.6
1,888,707	+		AO353_08590	0.86	-1.2
1,888,708	-		AO353_08590	0.86	-1.0
1,888,708	-		AO353_08590	0.86	+0.1
1,888,708	-		AO353_08590	0.86	-1.9
1,888,708	-		AO353_08590	0.86	-0.2
1,888,708	-		AO353_08590	0.86	-0.6
1,888,708	-		AO353_08590	0.86	-2.1
1,888,727	+		AO353_08590	0.88	-1.4
1,888,727	+		AO353_08590	0.88	-2.3
1,888,727	+		AO353_08590	0.88	+0.6
1,888,728	-		AO353_08590	0.88	-0.6
1,888,728	-		AO353_08590	0.88	-0.7
1,888,728	-		AO353_08590	0.88	-1.9
1,888,885	+				-2.2
1,888,886	-				+0.1
1,888,886	-				-2.1
1,888,886	-				-0.9
1,888,886	-				-2.6
1,888,886	-				-1.4
1,888,891	+				-1.3
1,888,891	+				-1.2
1,888,891	+				-2.2
1,888,891	+				-1.6
1,888,891	+				-1.1
1,888,891	+				+0.8
1,888,892	-				-0.1
1,888,892	-				-1.7
1,888,892	-				-0.8
1,888,892	-				+1.3
1,888,892	-				-2.6
1,888,892	-				-1.4
1,888,892	-				-1.9
1,888,924	+				-1.2
1,888,924	+				-1.4
1,888,925	-				+4.4
1,888,963	+				-1.2
1,888,963	+				-3.5
1,888,963	+				-0.2
1,888,963	+				-0.6
1,888,963	+				+0.1
1,888,963	+				-0.6
1,888,963	+				+0.7
1,888,964	-				+6.7
1,888,964	-				+5.7
1,888,984	+				-0.4
1,888,984	+				-1.1
1,888,998	+				-3.2
1,889,052	+				-3.2
1,889,053	-				+5.7
1,889,053	-				+4.7
1,889,055	-				+5.6
1,889,068	+				-1.6
1,889,068	+				-3.4
1,889,068	+				-0.7
1,889,068	+				-1.0
1,889,068	+				-1.2
1,889,068	+				-2.0
1,889,068	+				-0.6
1,889,069	-				+5.2
1,889,069	-				+5.1
1,889,069	-				+5.7
1,889,069	-				+5.6
1,889,069	-				+5.4
1,889,069	-				+6.1
1,889,069	-				+5.2
1,889,069	-				+4.6
1,889,069	-				+3.7
1,889,073	+				-0.1
1,889,073	+				-1.4
1,889,073	+				-2.4
1,889,074	-				+4.8
1,889,074	-				+5.8
1,889,074	-				+4.5
1,889,074	-				+5.0
1,889,074	-				+5.3
1,889,115	+				-1.6
1,889,115	+				-1.2
1,889,115	+				+0.8
1,889,115	+				-2.4
1,889,116	-				+3.4
1,889,116	-				+5.1
1,889,118	+				-2.8
1,889,198	+				-1.1
1,889,198	+				-1.2
1,889,198	+				-0.8
1,889,198	+				-1.8
1,889,198	+				-3.0
1,889,198	+				-1.9
1,889,198	+				-1.0
1,889,198	+				-1.7
1,889,198	+				-1.3
1,889,198	+				-0.6
1,889,198	+				-0.2
1,889,199	-				+3.9
1,889,199	-				+6.2
1,889,199	-				+3.3
1,889,199	-				+5.6
1,889,199	-				+5.2
1,889,202	+				-2.5
1,889,202	+				+0.3
1,889,219	+				-1.2
1,889,219	+				-1.2
1,889,219	+				-1.2
1,889,219	+				-0.1
1,889,219	+				-0.7
1,889,220	-				+4.0
1,889,220	-				+2.7
1,889,220	-				+4.0
1,889,296	+				-0.4
1,889,296	+				-0.8
1,889,296	+				-0.6
1,889,296	+				-0.3
1,889,296	+				-2.5
1,889,296	+				-1.4
1,889,297	-				+2.6
1,889,297	-				+5.0
1,889,297	-				+3.5
1,889,297	-				+4.4
1,889,297	-				+2.3
1,889,305	+				+3.2
1,889,305	+				-0.9
1,889,306	-				+5.4
1,889,324	+				-1.1
1,889,324	+				-0.8
1,889,325	-				+4.0
1,889,413	-				+6.8
1,889,632	-				-1.0
1,889,632	-				+0.9
1,889,632	-				-1.2
1,889,632	-				-0.7
1,889,655	-				-0.9
1,889,740	+		AO353_08595	0.13	-0.4
1,889,740	+				+1.1
1,889,741	-		AO353_08595	0.13	-2.8
1,889,741	-				+1.1
1,889,741	-		AO353_08595	0.13	+0.1
1,889,741	-		AO353_08595	0.13	-0.7
1,889,741	-		AO353_08595	0.13	-0.2
1,889,823	-		AO353_08595	0.19	-2.1
1,889,834	+		AO353_08595	0.20	-0.9
1,889,834	+		AO353_08595	0.20	-0.9
1,890,006	+		AO353_08595	0.32	-0.5
1,890,007	-		AO353_08595	0.33	-2.2
1,890,007	-		AO353_08595	0.33	+0.3
1,890,007	-		AO353_08595	0.33	-1.4
1,890,007	-		AO353_08595	0.33	-2.3
1,890,093	+		AO353_08595	0.39	-2.9
1,890,094	-		AO353_08595	0.39	-1.3
1,890,094	-		AO353_08595	0.39	-3.3
1,890,117	+		AO353_08595	0.41	+0.9
1,890,117	+		AO353_08595	0.41	+0.8
1,890,117	+		AO353_08595	0.41	-0.7
1,890,118	-		AO353_08595	0.41	-0.7
1,890,118	-		AO353_08595	0.41	-3.2
1,890,118	-		AO353_08595	0.41	-0.6
1,890,255	+		AO353_08595	0.51	-2.8
1,890,263	-		AO353_08595	0.51	-1.2
1,890,294	+		AO353_08595	0.53	-1.1
1,890,333	+		AO353_08595	0.56	-0.1
1,890,398	+				-0.2
1,890,398	+		AO353_08595	0.61	+0.5
1,890,398	+		AO353_08595	0.61	-2.8
1,890,398	+		AO353_08595	0.61	-2.1
1,890,399	-		AO353_08595	0.61	-0.3
1,890,511	-		AO353_08595	0.69	-0.9
1,890,534	+		AO353_08595	0.71	-0.1
1,890,534	+		AO353_08595	0.71	-1.8
1,890,534	+		AO353_08595	0.71	-0.8
1,890,534	+		AO353_08595	0.71	-2.6
1,890,534	+		AO353_08595	0.71	-0.8
1,890,534	+		AO353_08595	0.71	-0.4
1,890,613	+		AO353_08595	0.77	-1.0
1,890,613	+		AO353_08595	0.77	+1.5
1,890,613	+		AO353_08595	0.77	-2.2
1,890,614	-		AO353_08595	0.77	-1.6
1,890,614	-		AO353_08595	0.77	-2.7
1,890,614	-		AO353_08595	0.77	-1.0
1,890,617	+		AO353_08595	0.77	-0.6
1,890,618	-		AO353_08595	0.77	-0.1
1,890,654	+		AO353_08595	0.80	-2.2
1,890,654	+		AO353_08595	0.80	-0.9
1,890,654	+		AO353_08595	0.80	+2.9
1,890,741	+		AO353_08595	0.86	+0.5
1,890,741	+		AO353_08595	0.86	-0.8
1,890,742	-		AO353_08595	0.86	+0.2
1,890,742	-		AO353_08595	0.86	-0.6
1,890,742	-		AO353_08595	0.86	-1.9
1,890,742	-		AO353_08595	0.86	-0.5
1,890,742	-		AO353_08595	0.86	+1.1
1,890,822	+				-1.9
1,890,822	+				-0.7
1,890,822	+				-1.6
1,890,822	+				-2.8
1,890,822	+				-1.1
1,890,822	+				-0.7
1,890,822	+				-0.6
1,890,822	+				-0.5
1,890,823	-				+1.2
1,890,823	-				-0.9
1,890,823	-				+0.1
1,890,823	-				-1.2
1,890,823	-				-1.0
1,890,823	-				-0.3
1,890,837	+				-1.9
1,890,837	+				-0.4
1,890,837	+				-1.4
1,890,837	+				-2.1
1,890,838	-				-0.5
1,890,838	-				-3.0
1,890,838	-				-1.0
1,890,838	-				+0.2
1,890,838	-				-0.9
1,890,860	+				-0.7
1,890,860	+				-2.0
1,890,860	+				-1.0
1,890,909	+				+1.4
1,890,909	+				-0.1
1,890,909	+				+0.8
1,890,909	+				-0.3
1,890,910	-				-1.2
1,890,910	-				-0.8
1,890,910	-				-1.6
1,890,910	-				-0.2
1,890,918	+				-2.9
1,890,919	-				+0.8
1,890,933	+				-0.4
1,890,933	+				+0.6
1,890,934	-				-0.5
1,890,943	+				-1.6
1,890,989	-				+2.0
1,890,995	-				+0.2
1,891,170	+				-1.6
1,891,170	+				-0.6
1,891,170	+				-0.2
1,891,170	+				-1.5
1,891,170	+				-0.3
1,891,170	+				-1.2
1,891,170	+				-0.7
1,891,171	-				-0.8
1,891,171	-				-2.3
1,891,171	-				+1.7
1,891,318	+		AO353_08600	0.18	-0.8
1,891,318	+		AO353_08600	0.18	-1.5
1,891,318	+		AO353_08600	0.18	+2.2
1,891,318	+		AO353_08600	0.18	-0.6
1,891,318	+		AO353_08600	0.18	+1.5
1,891,319	-		AO353_08600	0.18	-0.5
1,891,319	-		AO353_08600	0.18	-0.6
1,891,361	-		AO353_08600	0.25	+3.4
1,891,361	-		AO353_08600	0.25	+0.5
1,891,516	+		AO353_08600	0.49	+0.9
1,891,516	+		AO353_08600	0.49	-1.4
1,891,516	+		AO353_08600	0.49	+0.2
1,891,517	-		AO353_08600	0.49	-1.2
1,891,517	-		AO353_08600	0.49	+0.1
1,891,786	+				-1.7
1,891,786	+				+0.2
1,891,786	+				-0.9
1,891,786	+				+0.8
1,891,786	+				-0.4
1,891,787	-				-0.9
1,891,787	-				-0.0
1,891,787	-				+0.6
1,891,787	-				+0.2
1,891,787	-				+3.8
1,891,787	-				-0.1
1,891,787	-				+0.5
1,891,787	-				-0.8
1,891,798	+				+0.0
1,891,798	+				-0.8
1,891,798	+				+0.5
1,891,799	-				-0.1
1,891,799	-				-0.3
1,891,799	-				-0.2
1,891,811	-				-2.0
1,891,851	+				+0.8
1,891,851	+				-1.1
1,891,852	-				-1.0
1,891,852	-				+0.1
1,891,852	-				+0.5
1,891,852	-				-1.5
1,891,907	+				-0.3
1,891,912	+				+2.5
1,891,912	+				+0.4
1,891,912	+				+1.1
1,891,912	+				+0.1
1,891,912	+				+0.3
1,891,913	-				-0.5
1,891,913	-				+0.1
1,891,913	-				-2.2