Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06560

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,458,734	+		AO353_06555	0.66	-1.9
1,458,734	+		AO353_06555	0.66	-1.3
1,458,735	-		AO353_06555	0.66	-1.1
1,458,735	-		AO353_06555	0.66	+3.5
1,458,735	-		AO353_06555	0.66	-0.1
1,458,746	+		AO353_06555	0.67	-1.1
1,458,746	+		AO353_06555	0.67	+0.1
1,458,746	+		AO353_06555	0.67	+0.9
1,458,746	+		AO353_06555	0.67	+0.7
1,458,746	+		AO353_06555	0.67	+0.7
1,458,746	+		AO353_06555	0.67	-0.3
1,458,746	+		AO353_06555	0.67	+0.8
1,458,746	+		AO353_06555	0.67	-1.1
1,458,746	+		AO353_06555	0.67	-0.9
1,458,747	-		AO353_06555	0.67	+1.3
1,458,747	-		AO353_06555	0.67	-0.1
1,458,903	+		AO353_06555	0.75	-0.9
1,458,903	+		AO353_06555	0.75	+2.5
1,458,903	+		AO353_06555	0.75	+2.3
1,458,903	+		AO353_06555	0.75	+0.0
1,458,903	+		AO353_06555	0.75	-0.3
1,458,903	+		AO353_06555	0.75	+1.7
1,458,903	+		AO353_06555	0.75	+0.6
1,458,903	+		AO353_06555	0.75	-1.2
1,458,904	-		AO353_06555	0.75	+0.5
1,458,904	-		AO353_06555	0.75	-0.2
1,458,904	-		AO353_06555	0.75	-2.5
1,458,982	-		AO353_06555	0.79	+0.9
1,458,982	-		AO353_06555	0.79	-1.2
1,458,982	-		AO353_06555	0.79	+0.7
1,459,250	+				-0.2
1,459,251	-				+0.1
1,459,251	-				-0.7
1,459,251	-				-1.1
1,459,251	-				+0.0
1,459,383	-				-0.7
1,459,385	+				+3.0
1,459,386	-				+1.8
1,459,386	-				+1.6
1,459,386	-				+3.6
1,459,386	-				+2.7
1,459,515	-				+2.3
1,459,515	-				+3.5
1,459,536	-				-1.6
1,459,558	+				-0.3
1,459,558	+				+0.9
1,459,583	+				+0.4
1,459,596	+				+0.0
1,459,596	+				+1.0
1,459,597	-				-1.0
1,459,632	+				+2.0
1,459,632	+				+1.7
1,459,633	-				-0.5
1,459,650	-				+0.9
1,459,666	+				+2.3
1,459,666	+				+1.0
1,459,666	+				+3.6
1,459,666	+				+2.0
1,459,666	+				+3.7
1,459,667	-				-0.7
1,459,667	-				+0.7
1,459,667	-				+1.1
1,459,667	-				+0.5
1,459,667	-				-1.0
1,459,667	-				-0.5
1,459,668	+				+1.0
1,459,668	+				+5.7
1,459,668	+				+1.9
1,459,668	+				+0.9
1,459,668	+				+1.4
1,459,668	+				+2.0
1,459,668	+				+1.6
1,459,669	-				-1.1
1,459,669	-				-1.4
1,459,669	-				+1.7
1,459,669	-				-1.6
1,459,669	-				+0.1
1,459,669	-				+0.2
1,459,669	-				-0.1
1,459,669	-				-1.1
1,459,669	-				+0.6
1,459,669	-				+0.4
1,459,689	+				+1.0
1,459,689	+				+1.6
1,459,689	+				-1.0
1,459,690	-				-2.3
1,459,690	-				-0.5
1,459,690	-				-0.7
1,459,690	-				-1.4
1,459,690	-				-0.3
1,459,704	-				+0.5
1,459,717	+				+1.0
1,459,717	+				+2.2
1,459,717	+				+0.6
1,459,717	+				-0.4
1,459,718	-				+0.7
1,459,718	-				-0.9
1,459,747	+				+0.3
1,459,747	+				+2.2
1,459,747	+				-1.5
1,459,748	-				-1.1
1,459,748	-				-0.6
1,459,748	-				-1.6
1,459,748	-				+1.6
1,459,748	-				-0.1
1,459,748	-				+1.4
1,459,748	-				-1.6
1,459,748	-				-0.5
1,459,751	+				-0.7
1,459,751	+				-1.2
1,459,751	+				-1.0
1,459,751	+				+1.1
1,459,752	-				+0.6
1,459,760	+				-2.7
1,459,760	+				+0.0
1,459,760	+				-1.1
1,459,760	+				-0.2
1,459,760	+				-0.3
1,459,760	+				+0.3
1,459,760	+				+1.7
1,459,760	+				-0.0
1,459,760	+				+0.2
1,459,760	+				+0.4
1,459,760	+				+0.1
1,459,760	+				-0.9
1,459,760	+				+0.3
1,459,761	-				+0.0
1,459,761	-				+1.5
1,459,761	-				-0.3
1,459,761	-				-1.6
1,459,761	-				+0.7
1,459,761	-				-0.5
1,459,761	-				-1.6
1,459,761	-				-0.5
1,459,761	-				+1.0
1,459,799	+				+1.3
1,459,799	+				-0.4
1,459,799	+				-0.1
1,459,799	+				+2.1
1,459,799	+				-0.1
1,459,800	-				+0.0
1,459,800	-				+1.0
1,459,800	-				-1.1
1,459,800	-				-0.6
1,459,810	+				+1.2
1,459,810	+				-0.2
1,459,810	+				-1.0
1,459,810	+				-1.3
1,459,810	+				-0.1
1,459,810	+				-0.1
1,459,811	-				+1.3
1,459,811	-				+0.6
1,459,811	-				-1.2
1,459,811	-				-1.3
1,459,811	-				-0.4
1,459,811	-				-0.4
1,459,811	-				-0.5
1,459,811	-				-0.6
1,459,947	+		AO353_06560	0.16	-2.8
1,460,076	-		AO353_06560	0.25	-0.9
1,460,141	+		AO353_06560	0.29	-3.2
1,460,141	+		AO353_06560	0.29	+0.7
1,460,141	+		AO353_06560	0.29	-1.0
1,460,141	+		AO353_06560	0.29	+0.9
1,460,142	-		AO353_06560	0.29	+1.9
1,460,142	-		AO353_06560	0.29	-2.0
1,460,142	-		AO353_06560	0.29	+0.7
1,460,392	+		AO353_06560	0.46	+0.6
1,460,392	+		AO353_06560	0.46	+0.8
1,460,392	+		AO353_06560	0.46	+0.9
1,460,392	+		AO353_06560	0.46	+1.3
1,460,392	+		AO353_06560	0.46	-0.9
1,460,392	+		AO353_06560	0.46	-1.5
1,460,392	+		AO353_06560	0.46	+1.6
1,460,392	+		AO353_06560	0.46	+0.7
1,460,392	+		AO353_06560	0.46	-0.2
1,460,393	-		AO353_06560	0.46	+0.3
1,460,393	-		AO353_06560	0.46	-0.1
1,460,393	-		AO353_06560	0.46	-0.0
1,460,393	-		AO353_06560	0.46	+0.7
1,460,393	-		AO353_06560	0.46	+0.5
1,460,393	-		AO353_06560	0.46	-3.1
1,460,569	-		AO353_06560	0.57	+1.1
1,460,636	+		AO353_06560	0.62	+0.2
1,460,636	+		AO353_06560	0.62	-2.3
1,460,637	-		AO353_06560	0.62	+0.0
1,460,637	-		AO353_06560	0.62	-1.0
1,460,846	+		AO353_06560	0.76	-0.1
1,460,846	+		AO353_06560	0.76	-1.7
1,460,846	+		AO353_06560	0.76	+1.5
1,460,846	+		AO353_06560	0.76	+2.0
1,460,846	+		AO353_06560	0.76	-0.1
1,460,846	+		AO353_06560	0.76	-2.1
1,460,846	+		AO353_06560	0.76	+0.8
1,460,846	+		AO353_06560	0.76	-0.5
1,460,846	+		AO353_06560	0.76	-2.1
1,460,846	+		AO353_06560	0.76	-1.3
1,460,846	+		AO353_06560	0.76	-1.4
1,460,846	+		AO353_06560	0.76	+0.5
1,460,846	+		AO353_06560	0.76	+0.4
1,460,847	-		AO353_06560	0.76	+0.0
1,460,847	-		AO353_06560	0.76	+0.7
1,460,847	-		AO353_06560	0.76	-1.9
1,460,847	-		AO353_06560	0.76	-1.1
1,460,847	-		AO353_06560	0.76	+0.6
1,460,847	-		AO353_06560	0.76	+0.6
1,460,847	-		AO353_06560	0.76	+0.8
1,460,847	-		AO353_06560	0.76	+1.4
1,460,847	-		AO353_06560	0.76	-0.3
1,460,847	-		AO353_06560	0.76	+0.3
1,460,847	-		AO353_06560	0.76	+0.8
1,460,847	-		AO353_06560	0.76	+1.7
1,460,847	-		AO353_06560	0.76	+0.3
1,460,847	-		AO353_06560	0.76	+1.7
1,460,847	-		AO353_06560	0.76	+0.4
1,460,847	-		AO353_06560	0.76	+0.4
1,460,847	-		AO353_06560	0.76	+0.9
1,460,847	-		AO353_06560	0.76	-0.3
1,460,847	-		AO353_06560	0.76	+1.1
1,460,847	-		AO353_06560	0.76	-2.8
1,461,071	+				-1.1
1,461,071	+				+2.3
1,461,071	+				+0.1
1,461,072	-				-1.6
1,461,107	+				+1.2
1,461,108	-				-2.0
1,461,159	-				+1.0
1,461,188	+				-0.1
1,461,188	+				+1.7
1,461,188	+				-2.0
1,461,188	+				-0.2
1,461,188	+				-0.8
1,461,188	+				-1.8
1,461,188	+				+0.4
1,461,188	+				+0.8
1,461,215	+				+0.0
1,461,215	+				-2.4
1,461,235	+				-1.8
1,461,264	+				-1.5
1,461,265	-				-1.8
1,461,265	-				-1.0
1,461,283	+				-1.2
1,461,283	+				-1.1
1,461,283	+				+0.9
1,461,283	+				+0.9
1,461,284	-				-2.1
1,461,284	-				+0.9
1,461,327	+				+1.7
1,461,327	+				-0.1
1,461,327	+				+0.6
1,461,327	+				-1.9
1,461,327	+				+1.3
1,461,327	+				-0.9
1,461,327	+				+1.3
1,461,327	+				-0.1
1,461,327	+				+1.7
1,461,327	+				-0.3
1,461,327	+				-2.0
1,461,327	+				-0.6
1,461,328	-				-1.6
1,461,328	-				-0.9
1,461,328	-				-0.7
1,461,328	-				-0.2
1,461,328	-				-2.0
1,461,328	-				+0.1
1,461,328	-				+0.6
1,461,328	-				+1.4
1,461,328	-				+4.1
1,461,328	-				-1.9
1,461,328	-				+1.4
1,461,328	-				+1.7
1,461,328	-				+1.6
1,461,328	-				+1.0
1,461,328	-				+0.8
1,461,444	+				+0.9
1,461,445	-				-1.4
1,461,462	+				+3.3
1,461,462	+				+0.9
1,461,462	+				+0.7
1,461,462	+				-2.1
1,461,462	+				-1.9
1,461,462	+				+1.8
1,461,462	+				+0.1
1,461,462	+				-1.0
1,461,462	+				+1.4
1,461,462	+				-0.7
1,461,462	+				+1.3
1,461,463	-				+2.0
1,461,463	-				+0.9
1,461,463	-				-1.2
1,461,463	-				+0.7
1,461,463	-				-0.5
1,461,463	-				+0.1
1,461,463	-				+1.1
1,461,463	-				+0.1
1,461,463	-				+0.5
1,461,463	-				-0.7
1,461,463	-				+0.7
1,461,509	+				+0.0
1,461,509	+				+0.9
1,461,509	+				-1.2
1,461,509	+				+0.0
1,461,509	+				+1.3
1,461,509	+				+1.8
1,461,510	-				-0.3
1,461,510	-				+1.3
1,461,510	-				-0.4
1,461,510	-				+0.3
1,461,547	+				-1.3
1,461,547	+				+0.4
1,461,548	-				+0.6
1,461,548	-				+1.7
1,461,548	-				-1.6
1,461,548	-				-0.3
1,461,548	-				+0.1
1,461,563	-				+2.5
1,461,625	+		AO353_06565	0.12	+1.2
1,461,625	+		AO353_06565	0.12	-1.4
1,461,625	+		AO353_06565	0.12	-0.6
1,461,625	+		AO353_06565	0.12	+1.6
1,461,625	+		AO353_06565	0.12	-0.7
1,461,625	+		AO353_06565	0.12	-0.3
1,461,625	+		AO353_06565	0.12	+0.1
1,461,625	+		AO353_06565	0.12	+0.0
1,461,625	+		AO353_06565	0.12	+0.5
1,461,625	+		AO353_06565	0.12	-0.1
1,461,625	+		AO353_06565	0.12	-0.5
1,461,625	+		AO353_06565	0.12	+1.7
1,461,625	+		AO353_06565	0.12	-1.1
1,461,625	+		AO353_06565	0.12	+1.1
1,461,626	-		AO353_06565	0.12	-0.1
1,461,626	-		AO353_06565	0.12	-0.6
1,461,626	-		AO353_06565	0.12	-0.3
1,461,626	-		AO353_06565	0.12	+1.6
1,461,626	-		AO353_06565	0.12	-1.0
1,461,626	-		AO353_06565	0.12	+3.9
1,461,626	-		AO353_06565	0.12	-1.0
1,461,626	-		AO353_06565	0.12	+0.4
1,461,626	-		AO353_06565	0.12	+1.9
1,461,626	-		AO353_06565	0.12	+0.3
1,461,626	-		AO353_06565	0.12	-0.8
1,461,626	-		AO353_06565	0.12	-1.2
1,461,626	-		AO353_06565	0.12	+0.3
1,461,694	+		AO353_06565	0.17	-1.1
1,461,694	+		AO353_06565	0.17	-0.1
1,461,695	-		AO353_06565	0.17	+0.9
1,461,695	-		AO353_06565	0.17	+1.3
1,461,853	+		AO353_06565	0.28	-0.8
1,461,853	+		AO353_06565	0.28	+1.0
1,461,853	+		AO353_06565	0.28	+0.1
1,461,853	+		AO353_06565	0.28	-0.9
1,462,134	+		AO353_06565	0.49	-0.9
1,462,134	+		AO353_06565	0.49	-0.8
1,462,134	+		AO353_06565	0.49	+0.1
1,462,134	+		AO353_06565	0.49	-0.8
1,462,135	-		AO353_06565	0.49	+1.4
1,462,135	-		AO353_06565	0.49	+0.3
1,462,135	-		AO353_06565	0.49	+0.6
1,462,135	-		AO353_06565	0.49	-0.7
1,462,135	-		AO353_06565	0.49	-0.5
1,462,135	-		AO353_06565	0.49	-2.0
1,462,135	-		AO353_06565	0.49	-0.5
1,462,135	-		AO353_06565	0.49	-0.3
1,462,135	-		AO353_06565	0.49	-0.3
1,462,150	+		AO353_06565	0.50	-0.8
1,462,150	+		AO353_06565	0.50	+2.4
1,462,150	+		AO353_06565	0.50	-0.3
1,462,151	-		AO353_06565	0.50	+0.0
1,462,151	-		AO353_06565	0.50	-1.5
1,462,151	-		AO353_06565	0.50	-0.9
1,462,151	-		AO353_06565	0.50	+1.3