Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02935 and AO353_02940 are separated by 388 nucleotides AO353_02940 and AO353_02945 are separated by 165 nucleotides
AO353_02935: AO353_02935 - ribose-phosphate pyrophosphokinase, at 624,348 to 624,932
_02935
AO353_02940: AO353_02940 - DNA-binding protein, at 625,321 to 625,647
_02940
AO353_02945: AO353_02945 - magnesium transporter, at 625,813 to 627,255
_02945
Position (kb) 625
626 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 624.321 kb on - strand at 624.321 kb on - strand at 624.321 kb on - strand at 624.321 kb on - strand at 624.321 kb on - strand at 624.321 kb on - strand at 624.349 kb on + strand at 624.349 kb on + strand at 624.350 kb on - strand at 624.350 kb on - strand at 624.390 kb on + strand at 624.390 kb on + strand at 624.390 kb on + strand at 624.481 kb on - strand, within AO353_02935 at 624.605 kb on - strand, within AO353_02935 at 624.651 kb on + strand, within AO353_02935 at 624.651 kb on + strand, within AO353_02935 at 624.651 kb on + strand, within AO353_02935 at 624.651 kb on + strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.652 kb on - strand, within AO353_02935 at 624.669 kb on + strand, within AO353_02935 at 624.669 kb on + strand, within AO353_02935 at 624.670 kb on - strand, within AO353_02935 at 624.670 kb on - strand, within AO353_02935 at 624.701 kb on - strand, within AO353_02935 at 624.913 kb on + strand at 624.913 kb on + strand at 624.914 kb on - strand at 624.914 kb on - strand at 624.914 kb on - strand at 624.914 kb on - strand at 624.914 kb on - strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.917 kb on + strand at 624.918 kb on - strand at 624.918 kb on - strand at 624.918 kb on - strand at 624.918 kb on - strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.936 kb on + strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.937 kb on - strand at 624.938 kb on + strand at 624.938 kb on + strand at 624.939 kb on - strand at 624.939 kb on - strand at 624.985 kb on + strand at 624.985 kb on + strand at 624.992 kb on + strand at 624.992 kb on + strand at 624.993 kb on - strand at 624.999 kb on + strand at 625.000 kb on - strand at 625.023 kb on + strand at 625.023 kb on + strand at 625.023 kb on + strand at 625.024 kb on - strand at 625.087 kb on - strand at 625.087 kb on - strand at 625.087 kb on - strand at 625.097 kb on + strand at 625.098 kb on - strand at 625.164 kb on + strand at 625.164 kb on + strand at 625.164 kb on + strand at 625.164 kb on + strand at 625.165 kb on - strand at 625.165 kb on - strand at 625.165 kb on - strand at 625.223 kb on + strand at 625.224 kb on - strand at 625.262 kb on + strand at 625.262 kb on + strand at 625.262 kb on + strand at 625.262 kb on + strand at 625.263 kb on - strand at 625.263 kb on - strand at 625.263 kb on - strand at 625.263 kb on - strand at 625.263 kb on - strand at 625.263 kb on - strand at 625.319 kb on - strand at 625.319 kb on - strand at 625.321 kb on - strand at 625.321 kb on - strand at 625.345 kb on + strand at 625.357 kb on - strand, within AO353_02940 at 625.376 kb on + strand, within AO353_02940 at 625.377 kb on - strand, within AO353_02940 at 625.377 kb on - strand, within AO353_02940 at 625.476 kb on + strand, within AO353_02940 at 625.476 kb on + strand, within AO353_02940 at 625.476 kb on + strand, within AO353_02940 at 625.666 kb on - strand at 625.714 kb on + strand at 625.714 kb on + strand at 625.714 kb on + strand at 625.714 kb on + strand at 625.714 kb on + strand at 625.715 kb on - strand at 625.715 kb on - strand at 625.715 kb on - strand at 625.715 kb on - strand at 625.745 kb on + strand at 625.745 kb on + strand at 625.745 kb on + strand at 625.745 kb on + strand at 625.746 kb on - strand at 625.746 kb on - strand at 625.746 kb on - strand at 625.751 kb on + strand at 625.752 kb on - strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.754 kb on + strand at 625.755 kb on - strand at 625.755 kb on - strand at 625.755 kb on - strand at 625.755 kb on - strand at 625.755 kb on - strand at 625.755 kb on - strand at 625.806 kb on + strand at 625.806 kb on + strand at 625.806 kb on + strand at 625.806 kb on + strand at 625.806 kb on + strand at 625.807 kb on - strand at 625.807 kb on - strand at 625.807 kb on - strand at 625.807 kb on - strand at 625.807 kb on - strand at 625.807 kb on - strand at 626.019 kb on - strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.027 kb on + strand, within AO353_02945 at 626.028 kb on - strand, within AO353_02945 at 626.028 kb on - strand, within AO353_02945 at 626.028 kb on - strand, within AO353_02945 at 626.028 kb on - strand, within AO353_02945 at 626.028 kb on - strand, within AO353_02945 at 626.028 kb on - strand, within AO353_02945 at 626.109 kb on + strand, within AO353_02945 at 626.110 kb on - strand, within AO353_02945 at 626.157 kb on + strand, within AO353_02945 at 626.157 kb on + strand, within AO353_02945 at 626.158 kb on - strand, within AO353_02945 at 626.178 kb on + strand, within AO353_02945 at 626.235 kb on + strand, within AO353_02945 at 626.343 kb on + strand, within AO353_02945 at 626.344 kb on - strand, within AO353_02945 at 626.344 kb on - strand, within AO353_02945 at 626.484 kb on - strand, within AO353_02945 at 626.510 kb on + strand, within AO353_02945 at 626.511 kb on - strand, within AO353_02945 at 626.630 kb on + strand, within AO353_02945 at 626.630 kb on + strand, within AO353_02945
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 624,321 - +0.6 624,321 - +0.6 624,321 - +1.3 624,321 - -0.9 624,321 - +2.5 624,321 - +0.1 624,349 + +1.4 624,349 + -1.6 624,350 - -0.1 624,350 - +0.5 624,390 + +0.7 624,390 + -1.4 624,390 + -2.1 624,481 - AO353_02935 0.23 +1.5 624,605 - AO353_02935 0.44 -0.8 624,651 + AO353_02935 0.52 +0.2 624,651 + AO353_02935 0.52 -0.5 624,651 + AO353_02935 0.52 +1.3 624,651 + AO353_02935 0.52 +0.5 624,652 - AO353_02935 0.52 +1.3 624,652 - AO353_02935 0.52 +0.3 624,652 - AO353_02935 0.52 -0.3 624,652 - AO353_02935 0.52 +0.7 624,652 - AO353_02935 0.52 +2.7 624,652 - AO353_02935 0.52 +0.4 624,652 - AO353_02935 0.52 -2.2 624,652 - AO353_02935 0.52 +0.5 624,669 + AO353_02935 0.55 -1.3 624,669 + AO353_02935 0.55 -0.6 624,670 - AO353_02935 0.55 -1.3 624,670 - AO353_02935 0.55 +3.8 624,701 - AO353_02935 0.60 -0.2 624,913 + +0.9 624,913 + -1.8 624,914 - -1.5 624,914 - +0.7 624,914 - +0.2 624,914 - +0.1 624,914 - +1.9 624,917 + +1.9 624,917 + +0.6 624,917 + +0.5 624,917 + +0.3 624,917 + +1.3 624,917 + -0.2 624,917 + -0.1 624,917 + -1.6 624,917 + -1.0 624,917 + -1.7 624,917 + -0.9 624,917 + -0.8 624,917 + +1.5 624,917 + +0.8 624,917 + -0.3 624,917 + -0.9 624,917 + -2.0 624,917 + +1.5 624,917 + -1.1 624,918 - -0.5 624,918 - -0.6 624,918 - -1.2 624,918 - +0.1 624,936 + +0.1 624,936 + -0.1 624,936 + -0.6 624,936 + -0.1 624,936 + +1.8 624,936 + -2.2 624,936 + +0.4 624,936 + +0.9 624,936 + +0.1 624,936 + -1.2 624,936 + +1.1 624,936 + -1.5 624,936 + -2.0 624,936 + -1.6 624,936 + -0.4 624,936 + -1.2 624,936 + +0.3 624,936 + +1.1 624,936 + -0.4 624,936 + +1.8 624,936 + +3.1 624,936 + +0.9 624,936 + +1.0 624,937 - -1.5 624,937 - +2.4 624,937 - +1.3 624,937 - -0.5 624,937 - -2.1 624,937 - +0.2 624,937 - -0.0 624,937 - -1.4 624,937 - +0.1 624,937 - +0.5 624,937 - +1.7 624,937 - -0.3 624,937 - -1.1 624,937 - -0.9 624,937 - +2.5 624,937 - +0.2 624,938 + +0.5 624,938 + -1.4 624,939 - +1.0 624,939 - -1.6 624,985 + -0.9 624,985 + +0.9 624,992 + +1.2 624,992 + +2.0 624,993 - +2.2 624,999 + +0.4 625,000 - +0.1 625,023 + -0.7 625,023 + +0.5 625,023 + +2.3 625,024 - +2.1 625,087 - +0.0 625,087 - -0.9 625,087 - +0.5 625,097 + +1.7 625,098 - -0.6 625,164 + +1.3 625,164 + -0.8 625,164 + -2.3 625,164 + +0.2 625,165 - +0.4 625,165 - -1.9 625,165 - +1.2 625,223 + -0.8 625,224 - -2.0 625,262 + -1.2 625,262 + +0.9 625,262 + -2.3 625,262 + +0.5 625,263 - -1.6 625,263 - -0.3 625,263 - -0.5 625,263 - +1.4 625,263 - -0.6 625,263 - +1.1 625,319 - +1.9 625,319 - -0.6 625,321 - -0.4 625,321 - -0.9 625,345 + -0.3 625,357 - AO353_02940 0.11 -1.1 625,376 + AO353_02940 0.17 -0.3 625,377 - AO353_02940 0.17 -0.5 625,377 - AO353_02940 0.17 -0.6 625,476 + AO353_02940 0.47 -3.0 625,476 + AO353_02940 0.47 +1.2 625,476 + AO353_02940 0.47 -1.5 625,666 - -0.9 625,714 + -0.9 625,714 + +0.2 625,714 + +0.6 625,714 + -1.3 625,714 + -1.6 625,715 - +0.8 625,715 - -0.6 625,715 - +0.2 625,715 - +1.0 625,745 + -2.1 625,745 + -0.7 625,745 + +0.8 625,745 + +0.3 625,746 - +0.6 625,746 - +0.2 625,746 - -0.5 625,751 + +0.7 625,752 - -2.2 625,754 + +2.5 625,754 + -0.8 625,754 + -0.6 625,754 + -1.6 625,754 + +0.1 625,754 + -0.8 625,754 + -1.4 625,754 + -2.2 625,754 + +0.9 625,754 + +0.5 625,754 + -1.2 625,754 + -1.4 625,754 + +0.2 625,754 + +0.5 625,755 - +7.8 625,755 - +0.5 625,755 - +0.3 625,755 - -1.7 625,755 - -0.4 625,755 - +0.2 625,806 + +0.5 625,806 + -2.2 625,806 + -2.2 625,806 + +1.9 625,806 + -0.3 625,807 - -0.6 625,807 - +1.1 625,807 - -0.6 625,807 - -0.4 625,807 - -1.6 625,807 - +0.8 626,019 - AO353_02945 0.14 -2.6 626,027 + AO353_02945 0.15 +1.2 626,027 + AO353_02945 0.15 -0.3 626,027 + AO353_02945 0.15 -0.1 626,027 + AO353_02945 0.15 -0.8 626,027 + AO353_02945 0.15 +0.9 626,027 + AO353_02945 0.15 -0.9 626,027 + AO353_02945 0.15 -0.1 626,027 + AO353_02945 0.15 +3.0 626,028 - AO353_02945 0.15 -0.5 626,028 - AO353_02945 0.15 +1.2 626,028 - AO353_02945 0.15 -0.8 626,028 - AO353_02945 0.15 +0.1 626,028 - AO353_02945 0.15 -1.7 626,028 - AO353_02945 0.15 -1.1 626,109 + AO353_02945 0.21 +0.1 626,110 - AO353_02945 0.21 +0.1 626,157 + AO353_02945 0.24 -1.6 626,157 + AO353_02945 0.24 -0.9 626,158 - AO353_02945 0.24 +0.4 626,178 + AO353_02945 0.25 -0.9 626,235 + AO353_02945 0.29 +1.6 626,343 + AO353_02945 0.37 +2.4 626,344 - AO353_02945 0.37 +0.8 626,344 - AO353_02945 0.37 -0.2 626,484 - AO353_02945 0.47 +0.2 626,510 + AO353_02945 0.48 +1.2 626,511 - AO353_02945 0.48 -0.7 626,630 + AO353_02945 0.57 +1.5 626,630 + AO353_02945 0.57 -0.5
Or see this region's nucleotide sequence