Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01850 and AO353_01855 overlap by 7 nucleotides AO353_01855 and AO353_01860 are separated by 480 nucleotides AO353_01860 and AO353_01865 are separated by 298 nucleotides
AO353_01850: AO353_01850 - succinate dehydrogenase, at 390,907 to 391,275
_01850
AO353_01855: AO353_01855 - succinate dehydrogenase, at 391,269 to 391,526
_01855
AO353_01860: AO353_01860 - type II citrate synthase, at 392,007 to 393,296
_01860
AO353_01865: AO353_01865 - cation/acetate symporter ActP, at 393,595 to 395,253
_01865
Position (kb) 392
393
394 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 391.781 kb on - strand at 391.783 kb on - strand at 391.824 kb on - strand at 391.826 kb on + strand at 391.827 kb on - strand at 391.827 kb on - strand at 391.914 kb on - strand at 391.935 kb on + strand at 391.943 kb on + strand at 391.943 kb on + strand at 391.943 kb on + strand at 391.945 kb on + strand at 391.945 kb on + strand at 391.992 kb on + strand at 391.992 kb on + strand at 391.996 kb on + strand at 391.996 kb on + strand at 391.996 kb on + strand at 393.294 kb on + strand at 393.294 kb on + strand at 393.295 kb on - strand at 393.295 kb on - strand at 393.319 kb on + strand at 393.319 kb on + strand at 393.319 kb on + strand at 393.320 kb on - strand at 393.320 kb on - strand at 393.350 kb on + strand at 393.413 kb on + strand at 393.413 kb on + strand at 393.413 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.508 kb on - strand at 393.508 kb on - strand at 393.508 kb on - strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.579 kb on + strand at 393.579 kb on + strand at 393.579 kb on + strand at 393.579 kb on + strand at 393.580 kb on - strand at 393.580 kb on - strand at 393.580 kb on - strand at 393.580 kb on - strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.592 kb on - strand at 393.592 kb on - strand at 393.592 kb on - strand at 393.753 kb on - strand at 393.759 kb on - strand at 393.874 kb on - strand, within AO353_01865 at 393.874 kb on - strand, within AO353_01865 at 393.890 kb on + strand, within AO353_01865 at 393.890 kb on + strand, within AO353_01865 at 393.890 kb on + strand, within AO353_01865 at 393.891 kb on - strand, within AO353_01865 at 393.891 kb on - strand, within AO353_01865 at 393.891 kb on - strand, within AO353_01865 at 394.086 kb on - strand, within AO353_01865 at 394.086 kb on - strand, within AO353_01865 at 394.160 kb on - strand, within AO353_01865 at 394.185 kb on + strand, within AO353_01865 at 394.185 kb on + strand, within AO353_01865 at 394.185 kb on + strand, within AO353_01865 at 394.186 kb on - strand, within AO353_01865 at 394.186 kb on - strand, within AO353_01865
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 391,781 - -0.6 391,783 - -0.6 391,824 - +0.6 391,826 + +0.8 391,827 - -0.9 391,827 - -2.9 391,914 - -0.9 391,935 + +0.1 391,943 + -2.3 391,943 + -1.1 391,943 + -0.6 391,945 + -1.1 391,945 + +1.6 391,992 + -0.7 391,992 + -1.1 391,996 + +2.6 391,996 + +1.4 391,996 + -2.0 393,294 + +0.6 393,294 + -1.3 393,295 - -1.4 393,295 - -2.0 393,319 + -1.3 393,319 + -2.2 393,319 + -1.7 393,320 - -1.1 393,320 - -1.4 393,350 + -1.3 393,413 + -0.6 393,413 + -0.8 393,413 + -0.5 393,507 + +0.6 393,507 + -0.6 393,507 + +0.7 393,507 + -1.5 393,507 + +1.2 393,508 - +0.2 393,508 - -0.1 393,508 - -0.4 393,565 + -0.8 393,565 + -1.5 393,565 + +0.2 393,565 + -0.2 393,565 + +2.9 393,565 + -1.1 393,565 + +2.0 393,565 + +0.5 393,565 + -1.1 393,565 + +0.1 393,565 + -0.6 393,565 + +2.4 393,566 - -0.3 393,566 - +1.1 393,566 - +4.8 393,566 - +1.1 393,566 - -0.7 393,566 - -1.1 393,566 - +1.1 393,566 - +2.0 393,566 - -1.1 393,566 - -1.4 393,566 - -1.4 393,566 - -0.9 393,566 - -1.8 393,566 - -0.1 393,566 - -1.1 393,567 + -0.2 393,567 + -1.7 393,567 + -1.4 393,567 + -1.6 393,567 + -1.8 393,567 + +0.4 393,567 + +0.7 393,567 + +0.1 393,567 + -1.0 393,567 + +0.9 393,567 + -0.6 393,567 + -0.8 393,567 + -0.3 393,567 + +0.2 393,567 + -0.7 393,568 - -1.0 393,568 - -1.3 393,568 - -1.1 393,568 - -0.4 393,568 - -2.5 393,568 - +1.7 393,568 - +0.2 393,569 + +0.1 393,569 + +1.4 393,569 + -1.1 393,569 + -2.0 393,569 + +0.8 393,569 + -1.3 393,569 + +1.4 393,569 + -0.3 393,570 - +2.5 393,570 - -0.0 393,570 - -0.7 393,570 - +0.9 393,570 - -1.4 393,570 - -0.9 393,570 - +0.4 393,570 - -1.0 393,579 + +0.8 393,579 + -2.6 393,579 + -2.4 393,579 + +0.6 393,580 - +2.5 393,580 - -1.3 393,580 - -0.8 393,580 - -0.2 393,581 + -2.5 393,581 + -0.3 393,581 + +1.8 393,581 + +1.1 393,581 + +1.9 393,581 + +0.1 393,581 + +1.0 393,581 + -0.6 393,581 + +1.2 393,581 + +0.6 393,581 + +0.1 393,581 + -1.4 393,581 + +1.4 393,581 + -2.1 393,582 - +0.8 393,582 - -0.5 393,582 - -0.5 393,582 - -0.9 393,582 - -0.6 393,582 - +1.6 393,582 - -0.9 393,582 - -1.2 393,582 - +1.2 393,582 - +1.6 393,582 - -0.9 393,591 + -0.3 393,591 + -0.5 393,591 + -0.1 393,591 + +0.6 393,591 + +1.4 393,591 + +1.6 393,591 + -0.6 393,592 - -0.7 393,592 - -0.2 393,592 - -1.8 393,753 - -1.9 393,759 - -0.8 393,874 - AO353_01865 0.17 -1.1 393,874 - AO353_01865 0.17 +0.0 393,890 + AO353_01865 0.18 -0.2 393,890 + AO353_01865 0.18 +0.8 393,890 + AO353_01865 0.18 -2.1 393,891 - AO353_01865 0.18 -1.7 393,891 - AO353_01865 0.18 -0.6 393,891 - AO353_01865 0.18 -0.3 394,086 - AO353_01865 0.30 -1.5 394,086 - AO353_01865 0.30 +2.8 394,160 - AO353_01865 0.34 +0.4 394,185 + AO353_01865 0.36 +1.2 394,185 + AO353_01865 0.36 -1.4 394,185 + AO353_01865 0.36 -0.6 394,186 - AO353_01865 0.36 -1.4 394,186 - AO353_01865 0.36 -2.7
Or see this region's nucleotide sequence