Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_01825

Experiment: acetate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_01820 and AO353_01825 are separated by 196 nucleotidesAO353_01825 and AO353_01830 are separated by 111 nucleotides AO353_01820: AO353_01820 - succinyl-CoA synthetase subunit beta, at 381,147 to 382,313 _01820 AO353_01825: AO353_01825 - dihydrolipoamide dehydrogenase, at 382,510 to 383,946 _01825 AO353_01830: AO353_01830 - dihydrolipoamide succinyltransferase, at 384,058 to 385,275 _01830 Position (kb) 382 383 384Strain fitness (log2 ratio) -2 -1 0 1at 381.556 kb on - strand, within AO353_01820at 382.504 kb on - strandat 382.504 kb on - strandat 382.504 kb on - strandat 382.512 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate (C)
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381,556 - AO353_01820 0.35 -1.6
382,504 - -0.2
382,504 - -0.2
382,504 - -2.6
382,512 - -2.4

Or see this region's nucleotide sequence