Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS09615 and ABIE51_RS09620 are separated by 637 nucleotides ABIE51_RS09620 and ABIE51_RS09625 are separated by 17 nucleotides ABIE51_RS09625 and ABIE51_RS09630 are separated by 13 nucleotides
ABIE51_RS09615: ABIE51_RS09615 - cation diffusion facilitator family transporter, at 2,071,801 to 2,072,772
_RS09615
ABIE51_RS09620: ABIE51_RS09620 - DUF2092 domain-containing protein, at 2,073,410 to 2,074,153
_RS09620
ABIE51_RS09625: ABIE51_RS09625 - DUF2950 domain-containing protein, at 2,074,171 to 2,075,070
_RS09625
ABIE51_RS09630: ABIE51_RS09630 - hypothetical protein, at 2,075,084 to 2,075,524
_RS09630
Position (kb)
2073
2074
2075 Strain fitness (log2 ratio)
-2
-1
0
1 at 2072.429 kb on + strand, within ABIE51_RS09615 at 2072.429 kb on + strand, within ABIE51_RS09615 at 2072.429 kb on + strand, within ABIE51_RS09615 at 2072.430 kb on - strand, within ABIE51_RS09615 at 2072.430 kb on - strand, within ABIE51_RS09615 at 2072.430 kb on - strand, within ABIE51_RS09615 at 2072.430 kb on - strand, within ABIE51_RS09615 at 2072.487 kb on - strand, within ABIE51_RS09615 at 2072.487 kb on - strand, within ABIE51_RS09615 at 2072.487 kb on - strand, within ABIE51_RS09615 at 2072.487 kb on - strand, within ABIE51_RS09615 at 2072.487 kb on - strand, within ABIE51_RS09615 at 2072.547 kb on - strand, within ABIE51_RS09615 at 2072.547 kb on - strand, within ABIE51_RS09615 at 2072.826 kb on + strand at 2072.996 kb on - strand at 2073.152 kb on - strand at 2073.526 kb on + strand, within ABIE51_RS09620 at 2073.627 kb on + strand, within ABIE51_RS09620 at 2073.628 kb on - strand, within ABIE51_RS09620 at 2073.633 kb on + strand, within ABIE51_RS09620 at 2073.634 kb on - strand, within ABIE51_RS09620 at 2073.634 kb on - strand, within ABIE51_RS09620 at 2073.816 kb on + strand, within ABIE51_RS09620 at 2073.930 kb on + strand, within ABIE51_RS09620 at 2073.930 kb on + strand, within ABIE51_RS09620 at 2073.931 kb on - strand, within ABIE51_RS09620 at 2074.400 kb on + strand, within ABIE51_RS09625 at 2074.400 kb on + strand, within ABIE51_RS09625 at 2074.400 kb on + strand, within ABIE51_RS09625 at 2074.401 kb on - strand, within ABIE51_RS09625 at 2074.532 kb on + strand, within ABIE51_RS09625 at 2074.532 kb on + strand, within ABIE51_RS09625 at 2074.836 kb on - strand, within ABIE51_RS09625
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,072,429 + ABIE51_RS09615 0.65 +0.2 2,072,429 + ABIE51_RS09615 0.65 -0.9 2,072,429 + ABIE51_RS09615 0.65 +0.2 2,072,430 - ABIE51_RS09615 0.65 -1.1 2,072,430 - ABIE51_RS09615 0.65 +0.2 2,072,430 - ABIE51_RS09615 0.65 -0.6 2,072,430 - ABIE51_RS09615 0.65 +0.3 2,072,487 - ABIE51_RS09615 0.71 -0.6 2,072,487 - ABIE51_RS09615 0.71 -0.9 2,072,487 - ABIE51_RS09615 0.71 -1.5 2,072,487 - ABIE51_RS09615 0.71 -0.8 2,072,487 - ABIE51_RS09615 0.71 -0.9 2,072,547 - ABIE51_RS09615 0.77 +1.1 2,072,547 - ABIE51_RS09615 0.77 -0.2 2,072,826 + -0.2 2,072,996 - +0.1 2,073,152 - -0.9 2,073,526 + ABIE51_RS09620 0.16 +0.6 2,073,627 + ABIE51_RS09620 0.29 -0.6 2,073,628 - ABIE51_RS09620 0.29 +0.3 2,073,633 + ABIE51_RS09620 0.30 -0.2 2,073,634 - ABIE51_RS09620 0.30 +0.1 2,073,634 - ABIE51_RS09620 0.30 +0.3 2,073,816 + ABIE51_RS09620 0.55 -1.8 2,073,930 + ABIE51_RS09620 0.70 +0.2 2,073,930 + ABIE51_RS09620 0.70 +0.7 2,073,931 - ABIE51_RS09620 0.70 -0.3 2,074,400 + ABIE51_RS09625 0.25 +0.8 2,074,400 + ABIE51_RS09625 0.25 -1.0 2,074,400 + ABIE51_RS09625 0.25 +0.6 2,074,401 - ABIE51_RS09625 0.26 -0.7 2,074,532 + ABIE51_RS09625 0.40 -0.4 2,074,532 + ABIE51_RS09625 0.40 +0.6 2,074,836 - ABIE51_RS09625 0.74 -0.2
Or see this region's nucleotide sequence