Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09620

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE51_RS09615 and ABIE51_RS09620 are separated by 637 nucleotidesABIE51_RS09620 and ABIE51_RS09625 are separated by 17 nucleotidesABIE51_RS09625 and ABIE51_RS09630 are separated by 13 nucleotides ABIE51_RS09615: ABIE51_RS09615 - cation diffusion facilitator family transporter, at 2,071,801 to 2,072,772 _RS09615 ABIE51_RS09620: ABIE51_RS09620 - DUF2092 domain-containing protein, at 2,073,410 to 2,074,153 _RS09620 ABIE51_RS09625: ABIE51_RS09625 - DUF2950 domain-containing protein, at 2,074,171 to 2,075,070 _RS09625 ABIE51_RS09630: ABIE51_RS09630 - hypothetical protein, at 2,075,084 to 2,075,524 _RS09630 Position (kb) 2073 2074 2075Strain fitness (log2 ratio) -2 -1 0 1at 2072.429 kb on + strand, within ABIE51_RS09615at 2072.429 kb on + strand, within ABIE51_RS09615at 2072.429 kb on + strand, within ABIE51_RS09615at 2072.430 kb on - strand, within ABIE51_RS09615at 2072.430 kb on - strand, within ABIE51_RS09615at 2072.430 kb on - strand, within ABIE51_RS09615at 2072.430 kb on - strand, within ABIE51_RS09615at 2072.487 kb on - strand, within ABIE51_RS09615at 2072.487 kb on - strand, within ABIE51_RS09615at 2072.487 kb on - strand, within ABIE51_RS09615at 2072.487 kb on - strand, within ABIE51_RS09615at 2072.487 kb on - strand, within ABIE51_RS09615at 2072.547 kb on - strand, within ABIE51_RS09615at 2072.547 kb on - strand, within ABIE51_RS09615at 2072.826 kb on + strandat 2072.996 kb on - strandat 2073.152 kb on - strandat 2073.526 kb on + strand, within ABIE51_RS09620at 2073.627 kb on + strand, within ABIE51_RS09620at 2073.628 kb on - strand, within ABIE51_RS09620at 2073.633 kb on + strand, within ABIE51_RS09620at 2073.634 kb on - strand, within ABIE51_RS09620at 2073.634 kb on - strand, within ABIE51_RS09620at 2073.816 kb on + strand, within ABIE51_RS09620at 2073.930 kb on + strand, within ABIE51_RS09620at 2073.930 kb on + strand, within ABIE51_RS09620at 2073.931 kb on - strand, within ABIE51_RS09620at 2074.400 kb on + strand, within ABIE51_RS09625at 2074.400 kb on + strand, within ABIE51_RS09625at 2074.400 kb on + strand, within ABIE51_RS09625at 2074.401 kb on - strand, within ABIE51_RS09625at 2074.532 kb on + strand, within ABIE51_RS09625at 2074.532 kb on + strand, within ABIE51_RS09625at 2074.836 kb on - strand, within ABIE51_RS09625

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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2,072,429 + ABIE51_RS09615 0.65 +0.2
2,072,429 + ABIE51_RS09615 0.65 -0.9
2,072,429 + ABIE51_RS09615 0.65 +0.2
2,072,430 - ABIE51_RS09615 0.65 -1.1
2,072,430 - ABIE51_RS09615 0.65 +0.2
2,072,430 - ABIE51_RS09615 0.65 -0.6
2,072,430 - ABIE51_RS09615 0.65 +0.3
2,072,487 - ABIE51_RS09615 0.71 -0.6
2,072,487 - ABIE51_RS09615 0.71 -0.9
2,072,487 - ABIE51_RS09615 0.71 -1.5
2,072,487 - ABIE51_RS09615 0.71 -0.8
2,072,487 - ABIE51_RS09615 0.71 -0.9
2,072,547 - ABIE51_RS09615 0.77 +1.1
2,072,547 - ABIE51_RS09615 0.77 -0.2
2,072,826 + -0.2
2,072,996 - +0.1
2,073,152 - -0.9
2,073,526 + ABIE51_RS09620 0.16 +0.6
2,073,627 + ABIE51_RS09620 0.29 -0.6
2,073,628 - ABIE51_RS09620 0.29 +0.3
2,073,633 + ABIE51_RS09620 0.30 -0.2
2,073,634 - ABIE51_RS09620 0.30 +0.1
2,073,634 - ABIE51_RS09620 0.30 +0.3
2,073,816 + ABIE51_RS09620 0.55 -1.8
2,073,930 + ABIE51_RS09620 0.70 +0.2
2,073,930 + ABIE51_RS09620 0.70 +0.7
2,073,931 - ABIE51_RS09620 0.70 -0.3
2,074,400 + ABIE51_RS09625 0.25 +0.8
2,074,400 + ABIE51_RS09625 0.25 -1.0
2,074,400 + ABIE51_RS09625 0.25 +0.6
2,074,401 - ABIE51_RS09625 0.26 -0.7
2,074,532 + ABIE51_RS09625 0.40 -0.4
2,074,532 + ABIE51_RS09625 0.40 +0.6
2,074,836 - ABIE51_RS09625 0.74 -0.2

Or see this region's nucleotide sequence