Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS01610 and ABIE51_RS01615 are separated by 8 nucleotides ABIE51_RS01615 and ABIE51_RS01620 are separated by 4 nucleotides
ABIE51_RS01610: ABIE51_RS01610 - phosphogluconate dehydratase, at 352,651 to 354,477
_RS01610
ABIE51_RS01615: ABIE51_RS01615 - 6-phosphogluconolactonase, at 354,486 to 355,235
_RS01615
ABIE51_RS01620: ABIE51_RS01620 - glucose-6-phosphate dehydrogenase, at 355,240 to 356,688
_RS01620
Position (kb) 354
355
356 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 353.648 kb on + strand, within ABIE51_RS01610 at 353.649 kb on - strand, within ABIE51_RS01610 at 353.802 kb on - strand, within ABIE51_RS01610 at 353.802 kb on - strand, within ABIE51_RS01610 at 353.802 kb on - strand, within ABIE51_RS01610 at 353.802 kb on - strand, within ABIE51_RS01610 at 353.802 kb on - strand, within ABIE51_RS01610 at 353.828 kb on + strand, within ABIE51_RS01610 at 353.883 kb on - strand, within ABIE51_RS01610 at 353.883 kb on - strand, within ABIE51_RS01610 at 353.883 kb on - strand, within ABIE51_RS01610 at 354.023 kb on + strand, within ABIE51_RS01610 at 354.024 kb on - strand, within ABIE51_RS01610 at 354.251 kb on + strand, within ABIE51_RS01610 at 354.251 kb on + strand, within ABIE51_RS01610 at 354.251 kb on + strand, within ABIE51_RS01610 at 354.252 kb on - strand, within ABIE51_RS01610 at 354.252 kb on - strand, within ABIE51_RS01610 at 354.252 kb on - strand, within ABIE51_RS01610 at 354.252 kb on - strand, within ABIE51_RS01610 at 354.402 kb on - strand at 354.488 kb on - strand at 354.488 kb on - strand at 355.242 kb on - strand at 355.242 kb on - strand at 355.242 kb on - strand at 355.242 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 353,648 + ABIE51_RS01610 0.55 -1.1 353,649 - ABIE51_RS01610 0.55 -2.0 353,802 - ABIE51_RS01610 0.63 -1.1 353,802 - ABIE51_RS01610 0.63 -1.4 353,802 - ABIE51_RS01610 0.63 -2.4 353,802 - ABIE51_RS01610 0.63 -1.2 353,802 - ABIE51_RS01610 0.63 -3.1 353,828 + ABIE51_RS01610 0.64 +0.5 353,883 - ABIE51_RS01610 0.67 -1.6 353,883 - ABIE51_RS01610 0.67 -3.0 353,883 - ABIE51_RS01610 0.67 -2.5 354,023 + ABIE51_RS01610 0.75 -0.5 354,024 - ABIE51_RS01610 0.75 -0.5 354,251 + ABIE51_RS01610 0.88 -0.7 354,251 + ABIE51_RS01610 0.88 -1.1 354,251 + ABIE51_RS01610 0.88 -0.3 354,252 - ABIE51_RS01610 0.88 -0.9 354,252 - ABIE51_RS01610 0.88 -0.8 354,252 - ABIE51_RS01610 0.88 -1.3 354,252 - ABIE51_RS01610 0.88 -1.1 354,402 - -2.1 354,488 - -0.3 354,488 - -0.2 355,242 - +0.4 355,242 - +0.0 355,242 - -2.7 355,242 - -1.1
Or see this region's nucleotide sequence