Strain Fitness in Pantoea sp. MT58 around IAI47_21690

Experiment: Cadmium acetate 8 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 8 uM, aerobic
79,282	+		IAI47_21685	0.16	+1.2
79,283	-		IAI47_21685	0.16	-0.5
79,367	-		IAI47_21685	0.25	+1.5
79,407	+		IAI47_21685	0.29	+0.7
79,407	+		IAI47_21685	0.29	+0.7
79,412	+		IAI47_21685	0.29	-2.8
79,476	+		IAI47_21685	0.36	+0.5
79,476	+		IAI47_21685	0.36	-0.0
79,476	+		IAI47_21685	0.36	-1.1
79,476	+		IAI47_21685	0.36	-0.5
79,477	-		IAI47_21685	0.36	+1.0
79,497	+		IAI47_21685	0.38	+1.3
79,552	+		IAI47_21685	0.44	-0.9
79,552	+		IAI47_21685	0.44	-1.2
79,552	+		IAI47_21685	0.44	-0.3
79,553	-		IAI47_21685	0.44	+1.0
79,555	+		IAI47_21685	0.44	-0.9
79,555	+		IAI47_21685	0.44	+0.3
79,555	+		IAI47_21685	0.44	-1.2
79,555	+		IAI47_21685	0.44	+0.7
79,555	+		IAI47_21685	0.44	+0.1
79,556	-		IAI47_21685	0.45	-0.3
79,629	+		IAI47_21685	0.52	+1.2
79,630	-		IAI47_21685	0.52	+0.4
79,698	+		IAI47_21685	0.60	-0.3
79,703	-		IAI47_21685	0.60	+1.0
79,718	+		IAI47_21685	0.62	-0.5
79,718	+		IAI47_21685	0.62	+1.1
79,718	+		IAI47_21685	0.62	-0.1
79,743	+		IAI47_21685	0.64	+2.9
79,744	-		IAI47_21685	0.64	+1.6
79,744	-		IAI47_21685	0.64	+0.4
79,744	-		IAI47_21685	0.64	+1.5
79,747	+		IAI47_21685	0.65	+3.1
79,747	+		IAI47_21685	0.65	-0.9
79,747	+		IAI47_21685	0.65	+1.5
79,747	+		IAI47_21685	0.65	+1.0
79,747	+		IAI47_21685	0.65	-0.9
79,747	+		IAI47_21685	0.65	+2.6
79,747	+		IAI47_21685	0.65	+1.0
79,747	+		IAI47_21685	0.65	+0.7
79,747	+		IAI47_21685	0.65	-0.9
79,747	+		IAI47_21685	0.65	+0.4
79,747	+		IAI47_21685	0.65	+1.4
79,747	+		IAI47_21685	0.65	+1.6
79,747	+		IAI47_21685	0.65	+0.1
79,747	+		IAI47_21685	0.65	-0.1
79,747	+		IAI47_21685	0.65	+1.6
79,747	+		IAI47_21685	0.65	-0.8
79,748	-		IAI47_21685	0.65	+0.1
79,748	-		IAI47_21685	0.65	-0.4
79,748	-		IAI47_21685	0.65	-1.9
79,748	-		IAI47_21685	0.65	+0.4
79,748	-		IAI47_21685	0.65	+0.3
79,748	-		IAI47_21685	0.65	+3.7
79,748	-		IAI47_21685	0.65	+0.6
79,748	-		IAI47_21685	0.65	-0.2
79,748	-		IAI47_21685	0.65	-0.3
79,748	-		IAI47_21685	0.65	+0.5
79,748	-		IAI47_21685	0.65	-0.9
79,748	-		IAI47_21685	0.65	+1.3
79,748	-		IAI47_21685	0.65	-0.6
79,748	-		IAI47_21685	0.65	+1.1
79,748	-		IAI47_21685	0.65	-0.4
79,748	-		IAI47_21685	0.65	-0.9
79,748	-		IAI47_21685	0.65	-2.4
79,748	-		IAI47_21685	0.65	-2.2
79,748	-		IAI47_21685	0.65	-0.7
79,748	-		IAI47_21685	0.65	-0.6
79,751	+		IAI47_21685	0.65	-0.3
79,751	+		IAI47_21685	0.65	-0.1
79,751	+		IAI47_21685	0.65	+0.1
79,751	+		IAI47_21685	0.65	+0.3
79,752	-		IAI47_21685	0.65	+0.4
79,752	-		IAI47_21685	0.65	+0.7
79,764	+		IAI47_21685	0.67	+0.3
79,787	+		IAI47_21685	0.69	-0.5
79,787	+		IAI47_21685	0.69	+1.0
79,788	-		IAI47_21685	0.69	-0.1
79,788	-		IAI47_21685	0.69	-1.5
79,788	-		IAI47_21685	0.69	-0.3
79,791	+		IAI47_21685	0.69	-0.6
79,791	+		IAI47_21685	0.69	-0.7
79,792	-		IAI47_21685	0.70	-0.5
79,792	-		IAI47_21685	0.70	+0.4
79,792	-		IAI47_21685	0.70	+0.6
79,849	+		IAI47_21685	0.76	+1.2
79,850	-		IAI47_21685	0.76	-0.3
79,878	+		IAI47_21685	0.79	-0.1
79,878	+		IAI47_21685	0.79	+0.2
79,879	-		IAI47_21685	0.79	+0.5
79,902	+		IAI47_21685	0.81	+1.4
79,920	+		IAI47_21685	0.83	+0.5
79,938	-		IAI47_21685	0.85	+1.0
79,938	-		IAI47_21685	0.85	-1.0
79,962	-		IAI47_21685	0.88	+0.2
80,005	-				+1.1
80,005	-				+0.3
80,005	-				+1.6
80,005	-				+1.3
80,005	-				+2.3
80,005	-				-1.0
80,005	-				-0.7
80,020	+				-1.0
80,021	-				-0.3
80,059	-				-1.7
80,059	-				-0.0
80,070	+				-2.9
80,070	+				+0.5
80,070	+				+0.4
80,071	-				-0.8
80,071	-				-0.3
80,071	-				-2.2
80,071	-				-0.0
80,080	+				+2.9
80,081	-				+1.3
80,081	-				+0.1
80,081	-				+1.1
80,083	+				-0.0
80,083	+				+2.0
80,083	+				-0.0
80,083	+				+0.5
80,083	+				-0.2
80,083	+				+1.4
80,084	-				-0.3
80,084	-				+2.1
80,084	-				+2.9
80,084	-				-0.3
80,084	-				-2.1
80,084	-				+0.6
80,134	+				+0.8
80,134	+				+0.6
80,134	+				-1.0
80,134	+				-1.4
80,135	-				+0.6
80,135	-				+0.5
80,135	-				-1.4
80,146	+				-0.0
80,147	-				+0.5
80,147	-				-2.4
80,147	-				+0.2
80,147	-				-1.0
80,183	+				+0.3
80,183	+				-0.9
80,184	-				+0.9
80,221	-				-0.6
80,223	+				-1.2
80,223	+				+0.4
80,254	+				+2.3
80,254	+				+0.3
80,255	-				-0.5
80,270	-				-1.1
80,287	+				-0.0
80,288	-				-1.3
80,370	+		IAI47_21690	0.16	+0.5
80,370	+		IAI47_21690	0.16	+0.7
80,370	+		IAI47_21690	0.16	+0.3
80,370	+		IAI47_21690	0.16	-1.2
80,370	+		IAI47_21690	0.16	-0.7
80,370	+		IAI47_21690	0.16	-0.0
80,371	-		IAI47_21690	0.16	-1.9
80,371	-		IAI47_21690	0.16	+0.9
80,377	-		IAI47_21690	0.17	-0.2
80,411	+		IAI47_21690	0.22	-1.4
80,411	+		IAI47_21690	0.22	-0.5
80,411	+		IAI47_21690	0.22	-2.5
80,412	-		IAI47_21690	0.22	-1.7
80,412	-		IAI47_21690	0.22	-2.1
80,412	-		IAI47_21690	0.22	-0.0
80,412	-		IAI47_21690	0.22	-0.5
80,412	-		IAI47_21690	0.22	-2.1
80,431	-		IAI47_21690	0.26	+0.8
80,431	-		IAI47_21690	0.26	-2.4
80,432	+		IAI47_21690	0.26	-1.2
80,432	+		IAI47_21690	0.26	-1.0
80,432	+		IAI47_21690	0.26	+0.3
80,432	+		IAI47_21690	0.26	-0.3
80,432	+		IAI47_21690	0.26	-1.8
80,432	+		IAI47_21690	0.26	-1.5
80,433	-		IAI47_21690	0.26	-1.5
80,433	-		IAI47_21690	0.26	+0.3
80,433	-		IAI47_21690	0.26	-2.0
80,433	-		IAI47_21690	0.26	-1.0
80,436	+		IAI47_21690	0.26	+1.9
80,437	-		IAI47_21690	0.27	-1.6
80,438	+		IAI47_21690	0.27	-1.5
80,439	-		IAI47_21690	0.27	-1.0
80,439	-		IAI47_21690	0.27	-0.0
80,473	+		IAI47_21690	0.32	-3.7
80,473	+		IAI47_21690	0.32	-1.9
80,473	+		IAI47_21690	0.32	+0.3
80,473	+		IAI47_21690	0.32	+2.3
80,473	+		IAI47_21690	0.32	-1.9
80,474	-		IAI47_21690	0.33	-1.4
80,474	-		IAI47_21690	0.33	-0.2
80,474	-		IAI47_21690	0.33	-0.7
80,476	+		IAI47_21690	0.33	-0.7
80,476	+		IAI47_21690	0.33	-0.4
80,476	+		IAI47_21690	0.33	-0.5
80,476	+		IAI47_21690	0.33	-1.9
80,476	+		IAI47_21690	0.33	-2.2
80,476	+		IAI47_21690	0.33	-0.9
80,476	+		IAI47_21690	0.33	-1.7
80,476	+		IAI47_21690	0.33	-3.0
80,477	-		IAI47_21690	0.33	+0.3
80,477	-		IAI47_21690	0.33	+1.1
80,477	-		IAI47_21690	0.33	-1.4
80,477	-		IAI47_21690	0.33	-2.4
80,477	-		IAI47_21690	0.33	-1.1
80,501	+		IAI47_21690	0.37	+0.3
80,502	-		IAI47_21690	0.37	-0.4
80,502	-		IAI47_21690	0.37	-0.0
80,502	-		IAI47_21690	0.37	-0.2
80,531	+		IAI47_21690	0.42	-1.0
80,531	+		IAI47_21690	0.42	-1.9
80,531	+		IAI47_21690	0.42	-0.7
80,532	-		IAI47_21690	0.42	+0.5
80,532	-		IAI47_21690	0.42	-1.3
80,532	-		IAI47_21690	0.42	-0.4
80,532	-		IAI47_21690	0.42	+1.0
80,532	-		IAI47_21690	0.42	-0.1
80,532	-		IAI47_21690	0.42	+0.7
80,619	+		IAI47_21690	0.56	+0.7
80,620	-		IAI47_21690	0.56	+0.4
80,620	-		IAI47_21690	0.56	-2.3
80,624	+		IAI47_21690	0.57	-1.9
80,624	+		IAI47_21690	0.57	-0.8
80,624	+		IAI47_21690	0.57	-1.8
80,625	-		IAI47_21690	0.57	-0.4
80,687	+		IAI47_21690	0.67	-1.8
80,687	+		IAI47_21690	0.67	-0.0
80,687	+		IAI47_21690	0.67	-2.2
80,688	-		IAI47_21690	0.67	-0.5
80,705	-		IAI47_21690	0.70	+1.9
80,705	-		IAI47_21690	0.70	-2.3
80,775	+		IAI47_21690	0.81	-1.6
80,786	+		IAI47_21690	0.83	+0.2
80,793	+		IAI47_21690	0.84	+0.0
80,793	+		IAI47_21690	0.84	-2.4
80,794	-		IAI47_21690	0.85	-0.5
80,794	-		IAI47_21690	0.85	+2.9
80,794	-		IAI47_21690	0.85	-1.9
80,794	-		IAI47_21690	0.85	-0.2
80,806	+		IAI47_21690	0.87	-1.5
80,807	-		IAI47_21690	0.87	-0.9
80,817	+		IAI47_21690	0.88	-0.7
80,817	+		IAI47_21690	0.88	+0.3
80,818	-		IAI47_21690	0.88	-1.8
80,818	-		IAI47_21690	0.88	-1.7
80,818	-		IAI47_21690	0.88	+1.1
80,867	-				+0.3
80,867	-				-0.0
80,867	-				-0.1
80,869	+				+1.3
80,870	-				-0.8
80,870	-				-0.2
80,936	+				+1.4
80,936	+				+0.7
80,937	-				-0.8
80,975	+				-0.8
80,975	+				-0.4
80,975	+				+1.3
80,975	+				+1.3
80,976	-				+1.5
80,984	+				+1.2
80,984	+				-0.0
80,984	+				+0.0
81,028	+				+0.7
81,029	-				+0.5
81,029	-				+0.7
81,029	-				+0.4
81,029	-				-0.3
81,029	-				-0.7
81,048	+				-1.3
81,048	+				-1.6
81,048	+				+0.9
81,049	-				+0.6
81,049	-				-1.3
81,049	-				-0.2
81,049	-				+1.1
81,111	+				-0.2
81,112	-				+0.3
81,112	-				+0.1
81,112	-				+2.3
81,187	+				+1.1
81,187	+				+2.1
81,187	+				+1.7
81,187	+				-0.5
81,188	-				+2.0
81,188	-				-0.6
81,201	-				-0.8
81,286	+		IAI47_21695	0.12	+1.9
81,287	-		IAI47_21695	0.13	-0.0
81,287	-		IAI47_21695	0.13	-1.8
81,287	-		IAI47_21695	0.13	+0.7
81,287	-		IAI47_21695	0.13	-2.5
81,331	-		IAI47_21695	0.16	-0.3
81,476	+		IAI47_21695	0.27	+2.6
81,476	+		IAI47_21695	0.27	-0.4
81,477	-		IAI47_21695	0.27	+0.2
81,477	-		IAI47_21695	0.27	-1.4
81,477	-		IAI47_21695	0.27	-0.1
81,477	-		IAI47_21695	0.27	+0.5
81,587	+		IAI47_21695	0.36	+0.0
81,588	-		IAI47_21695	0.36	+1.9
81,588	-		IAI47_21695	0.36	+0.8
81,588	-		IAI47_21695	0.36	-0.3
81,588	-		IAI47_21695	0.36	+2.3
81,608	+		IAI47_21695	0.38	-0.5
81,608	+		IAI47_21695	0.38	+1.9
81,609	-		IAI47_21695	0.38	+0.6
81,609	-		IAI47_21695	0.38	+0.4
81,609	-		IAI47_21695	0.38	+1.0
81,611	+		IAI47_21695	0.38	+0.9
81,612	-		IAI47_21695	0.38	+1.6
81,612	-		IAI47_21695	0.38	+0.3
81,616	-		IAI47_21695	0.38	-0.3
81,616	-		IAI47_21695	0.38	-0.7
81,616	-		IAI47_21695	0.38	+0.7
81,616	-		IAI47_21695	0.38	+1.3
81,624	-		IAI47_21695	0.39	-0.9
81,675	-		IAI47_21695	0.43	-1.0
81,694	+		IAI47_21695	0.44	-0.3
81,758	-		IAI47_21695	0.49	-1.9
81,790	+		IAI47_21695	0.52	-0.0
81,790	+		IAI47_21695	0.52	+0.5
81,791	-		IAI47_21695	0.52	-0.7
81,791	-		IAI47_21695	0.52	+1.9
81,801	+		IAI47_21695	0.53	+0.1
81,802	-		IAI47_21695	0.53	-0.8