Strain Fitness in Rahnella sp. WP5 around EX31_RS25375

Experiment: L-Serine (N); ShewMM media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); ShewMM media; shaking
9,246	+		EX31_RS14985	0.35	-0.1
9,265	+		EX31_RS14985	0.37	+0.6
9,265	+		EX31_RS14985	0.37	-0.0
9,265	+		EX31_RS14985	0.37	+1.0
9,265	+		EX31_RS14985	0.37	+0.5
9,265	+		EX31_RS14985	0.37	-0.7
9,265	+		EX31_RS14985	0.37	+0.6
9,265	+		EX31_RS14985	0.37	-0.1
9,265	+		EX31_RS14985	0.37	+0.2
9,265	+		EX31_RS14985	0.37	-0.4
9,265	+		EX31_RS14985	0.37	+1.7
9,265	+		EX31_RS14985	0.37	+0.2
9,265	+		EX31_RS14985	0.37	+0.4
9,265	+		EX31_RS14985	0.37	+0.1
9,265	+		EX31_RS14985	0.37	+0.7
9,265	+		EX31_RS14985	0.37	+0.1
9,265	+		EX31_RS14985	0.37	+1.7
9,265	+		EX31_RS14985	0.37	+0.5
9,265	+		EX31_RS14985	0.37	-1.2
9,265	+		EX31_RS14985	0.37	+0.1
9,265	+		EX31_RS14985	0.37	-0.4
9,265	+		EX31_RS14985	0.37	+0.6
9,266	-		EX31_RS14985	0.37	+0.6
9,266	-		EX31_RS14985	0.37	-1.1
9,266	-		EX31_RS14985	0.37	+0.7
9,266	-		EX31_RS14985	0.37	+2.7
9,266	-		EX31_RS14985	0.37	+0.2
9,266	-		EX31_RS14985	0.37	+0.9
9,266	-		EX31_RS14985	0.37	+2.3
9,266	-		EX31_RS14985	0.37	+0.0
9,266	-		EX31_RS14985	0.37	+1.4
9,266	-		EX31_RS14985	0.37	+1.3
9,266	-		EX31_RS14985	0.37	-1.2
9,266	-		EX31_RS14985	0.37	-0.5
9,266	-		EX31_RS14985	0.37	-1.5
9,267	+		EX31_RS14985	0.37	+0.2
9,267	+		EX31_RS14985	0.37	-0.8
9,267	+		EX31_RS14985	0.37	-0.5
9,267	+		EX31_RS14985	0.37	-0.3
9,267	+		EX31_RS14985	0.37	+0.2
9,267	+		EX31_RS14985	0.37	+0.2
9,267	+		EX31_RS14985	0.37	-0.1
9,267	+		EX31_RS14985	0.37	+0.4
9,267	+		EX31_RS14985	0.37	-0.3
9,268	-		EX31_RS14985	0.37	-0.1
9,268	-		EX31_RS14985	0.37	+0.2
9,268	-		EX31_RS14985	0.37	-0.5
9,268	-		EX31_RS14985	0.37	+0.7
9,268	-		EX31_RS14985	0.37	+0.3
9,442	+		EX31_RS14985	0.51	+0.9
9,442	+		EX31_RS14985	0.51	+0.2
9,442	+		EX31_RS14985	0.51	-0.5
9,442	+		EX31_RS14985	0.51	+1.7
9,442	+		EX31_RS14985	0.51	-0.1
9,442	+		EX31_RS14985	0.51	-1.0
9,442	+		EX31_RS14985	0.51	-0.3
9,442	+		EX31_RS14985	0.51	-1.0
9,442	+		EX31_RS14985	0.51	+0.5
9,442	+		EX31_RS14985	0.51	+0.1
9,443	-		EX31_RS14985	0.51	+1.3
9,443	-		EX31_RS14985	0.51	+0.4
9,443	-		EX31_RS14985	0.51	-0.4
9,443	-		EX31_RS14985	0.51	-0.6
9,443	-		EX31_RS14985	0.51	-0.7
9,443	-		EX31_RS14985	0.51	-0.9
9,443	-		EX31_RS14985	0.51	+1.7
9,443	-		EX31_RS14985	0.51	+1.7
9,443	-		EX31_RS14985	0.51	+0.2
9,443	-		EX31_RS14985	0.51	+0.7
9,443	-		EX31_RS14985	0.51	-0.3
9,446	+		EX31_RS14985	0.51	-0.6
9,446	+		EX31_RS14985	0.51	-0.4
9,446	+		EX31_RS14985	0.51	-1.4
9,446	+		EX31_RS14985	0.51	-0.3
9,446	+		EX31_RS14985	0.51	+0.7
9,446	+		EX31_RS14985	0.51	+0.8
9,446	+		EX31_RS14985	0.51	-0.4
9,446	+		EX31_RS14985	0.51	+0.3
9,446	+		EX31_RS14985	0.51	+0.3
9,446	+		EX31_RS14985	0.51	+0.1
9,446	+		EX31_RS14985	0.51	+0.4
9,446	+		EX31_RS14985	0.51	-0.2
9,446	+		EX31_RS14985	0.51	+0.4
9,446	+		EX31_RS14985	0.51	-0.1
9,446	+		EX31_RS14985	0.51	+0.4
9,446	+		EX31_RS14985	0.51	-0.7
9,447	-		EX31_RS14985	0.52	+0.2
9,447	-		EX31_RS14985	0.52	-0.6
9,447	-		EX31_RS14985	0.52	+0.4
9,447	-		EX31_RS14985	0.52	+0.4
9,447	-		EX31_RS14985	0.52	-0.0
9,447	-		EX31_RS14985	0.52	+1.4
9,447	-		EX31_RS14985	0.52	-0.8
9,447	-		EX31_RS14985	0.52	+0.0
9,447	-		EX31_RS14985	0.52	-1.3
9,447	-		EX31_RS14985	0.52	+0.0
9,447	-		EX31_RS14985	0.52	-0.0
9,447	-		EX31_RS14985	0.52	+0.6
9,447	-		EX31_RS14985	0.52	+1.0
9,447	-		EX31_RS14985	0.52	+0.1
9,447	-		EX31_RS14985	0.52	+0.3
9,447	-		EX31_RS14985	0.52	+1.7
9,447	-		EX31_RS14985	0.52	-0.3
9,447	-		EX31_RS14985	0.52	-0.5
9,447	-		EX31_RS14985	0.52	+0.3
9,447	-		EX31_RS14985	0.52	-0.7
9,447	-		EX31_RS14985	0.52	-0.1
9,447	-		EX31_RS14985	0.52	-1.0
9,447	-		EX31_RS14985	0.52	+0.1
9,447	-		EX31_RS14985	0.52	-0.0
9,447	-		EX31_RS14985	0.52	+0.6
9,447	-		EX31_RS14985	0.52	+0.7
9,447	-		EX31_RS14985	0.52	-0.4
9,447	-		EX31_RS14985	0.52	+0.4
9,450	+		EX31_RS14985	0.52	-0.9
9,451	-		EX31_RS14985	0.52	+0.1
9,451	-		EX31_RS14985	0.52	-0.1
9,477	-		EX31_RS14985	0.54	+0.3
9,548	+		EX31_RS14985	0.60	-0.7
9,549	-		EX31_RS14985	0.60	+1.4
9,549	-		EX31_RS14985	0.60	-0.5
9,549	-		EX31_RS14985	0.60	+0.9
9,549	-		EX31_RS14985	0.60	+0.8
9,549	-		EX31_RS14985	0.60	-1.2
9,559	+		EX31_RS14985	0.61	-0.2
9,568	+		EX31_RS14985	0.61	+0.1
9,568	+		EX31_RS14985	0.61	+0.7
9,574	-		EX31_RS14985	0.62	+0.1
9,574	-		EX31_RS14985	0.62	-0.1
9,574	-		EX31_RS14985	0.62	-2.0
9,591	-		EX31_RS14985	0.63	+0.6
9,591	-		EX31_RS14985	0.63	+1.1
9,635	+		EX31_RS14985	0.67	-0.3
9,635	+		EX31_RS14985	0.67	+0.3
9,635	+		EX31_RS14985	0.67	-0.5
9,635	+		EX31_RS14985	0.67	-0.4
9,636	-		EX31_RS14985	0.67	+1.3
9,636	-		EX31_RS14985	0.67	-0.9
9,647	+		EX31_RS14985	0.68	-0.1
9,647	+		EX31_RS14985	0.68	-0.7
9,743	+		EX31_RS14985	0.75	+1.2
9,800	+		EX31_RS14985	0.80	-0.0
9,801	-		EX31_RS14985	0.80	+0.1
9,831	+		EX31_RS14985	0.83	+0.1
9,879	+		EX31_RS14985	0.86	-0.2
9,879	+		EX31_RS14985	0.86	-0.3
9,879	+		EX31_RS14985	0.86	+0.1
9,879	+		EX31_RS14985	0.86	+0.2
9,879	+		EX31_RS14985	0.86	-0.5
9,879	+		EX31_RS14985	0.86	+0.3
9,879	+		EX31_RS14985	0.86	+1.1
9,879	+		EX31_RS14985	0.86	-0.1
9,879	+		EX31_RS14985	0.86	-1.4
9,879	+		EX31_RS14985	0.86	+0.2
9,879	+		EX31_RS14985	0.86	+0.9
9,880	-		EX31_RS14985	0.87	+1.0
9,880	-		EX31_RS14985	0.87	+0.1
9,880	-		EX31_RS14985	0.87	-0.5
9,880	-		EX31_RS14985	0.87	+0.1
9,880	-		EX31_RS14985	0.87	+1.3
9,880	-		EX31_RS14985	0.87	+1.3
9,880	-		EX31_RS14985	0.87	+0.6
9,880	-		EX31_RS14985	0.87	-0.8
9,880	-		EX31_RS14985	0.87	+0.2
9,880	-		EX31_RS14985	0.87	-1.3
9,880	-		EX31_RS14985	0.87	+0.5
9,880	-		EX31_RS14985	0.87	+0.8
9,880	-		EX31_RS14985	0.87	-0.5
9,880	-		EX31_RS14985	0.87	-0.2
9,906	+		EX31_RS14985	0.89	+0.7
9,906	+		EX31_RS14985	0.89	-0.1
9,907	-		EX31_RS14985	0.89	+0.5
9,907	-		EX31_RS14985	0.89	-0.2
9,907	-		EX31_RS14985	0.89	+0.0
9,907	-		EX31_RS14985	0.89	+1.1
10,009	+				+0.7
10,089	+				-0.2
10,116	-				-1.0
10,125	-				-3.4
10,158	-				+0.3
10,198	+		EX31_RS25375	0.19	+0.1
10,199	-		EX31_RS25375	0.20	-2.9
10,199	-		EX31_RS25375	0.20	-2.2
10,233	-		EX31_RS25375	0.53	-3.2
10,233	-		EX31_RS25375	0.53	-2.5
10,275	+				-1.4
10,275	+				+0.1
10,275	+				-0.5
10,279	-				-1.1
10,389	-				-1.7
10,389	-				-2.0
10,448	-				-2.1
10,450	+				-0.8
10,450	+				-1.8
10,450	+				-3.2
10,450	+				-1.0
10,451	-				-3.1
10,451	-				-2.3
10,451	-				-2.3
10,451	-				-3.0
10,474	+				-0.9
10,474	+				-1.5
10,474	+				-4.0
10,474	+				-1.9
10,475	-				-1.2
10,475	-				-1.9
10,475	-				-1.5
10,475	-				-1.9
10,475	-				-0.9
10,478	+				-2.2
10,478	+				-3.6
10,478	+				-2.0
10,478	+				+0.3
10,478	+				+0.7
10,478	+				-1.9
10,478	+				-2.1
10,478	+				-1.5
10,478	+				-3.8
10,479	-				+1.1
10,479	-				-2.2
10,479	-				-1.0
10,479	-				-1.7
10,479	-				-2.7
10,479	-				-1.8
10,479	-				-2.8
10,479	-				-1.2
10,479	-				-1.4
10,483	+				-2.2
10,483	+				-0.9
10,483	+				+0.1
10,483	+				-2.4
10,483	+				-3.2
10,484	-				-2.5
10,484	-				-2.2
10,518	+				-2.4
10,518	+				-2.4
10,518	+				-0.7
10,519	-				-3.4
10,519	-				-2.4
10,519	-				-2.0
10,519	-				-2.9
10,519	-				-3.4
10,530	+				-4.3
10,530	+				+0.6
10,530	+				-1.4
10,530	+				-2.9
10,530	+				-2.7
10,530	+				-2.5
10,530	+				-0.7
10,531	-				-1.4
10,531	-				-2.0
10,531	-				-1.0
10,531	-				-2.4
10,531	-				-1.0
10,531	-				-2.4
10,531	-				-2.9
10,531	-				-1.9
10,531	-				-4.0
10,629	-		EX31_RS14990	0.12	-1.9
10,688	-		EX31_RS14990	0.16	-2.5
10,688	-		EX31_RS14990	0.16	+0.1
10,771	+		EX31_RS14990	0.21	+1.7
10,771	+		EX31_RS14990	0.21	-1.0
10,771	+		EX31_RS14990	0.21	-1.7
10,772	-		EX31_RS14990	0.21	-2.1
10,772	-		EX31_RS14990	0.21	-3.9
10,907	+		EX31_RS14990	0.29	-1.5
10,907	+		EX31_RS14990	0.29	-1.1
10,908	-		EX31_RS14990	0.29	-2.1
10,908	-		EX31_RS14990	0.29	-3.9
10,930	+		EX31_RS14990	0.30	-2.1
10,931	-		EX31_RS14990	0.31	-2.8
10,984	+		EX31_RS14990	0.34	-0.9
10,984	+		EX31_RS14990	0.34	-0.8
10,984	+		EX31_RS14990	0.34	-1.5
10,984	+		EX31_RS14990	0.34	-1.3
10,985	-		EX31_RS14990	0.34	-2.9
10,985	-		EX31_RS14990	0.34	-3.0
10,985	-		EX31_RS14990	0.34	-3.1
10,985	-		EX31_RS14990	0.34	-3.4
11,032	-		EX31_RS14990	0.37	-3.1
11,032	-		EX31_RS14990	0.37	-2.9
11,157	+		EX31_RS14990	0.44	-1.3
11,157	+		EX31_RS14990	0.44	-1.8
11,158	-		EX31_RS14990	0.44	-2.6
11,158	-		EX31_RS14990	0.44	-4.2
11,158	-		EX31_RS14990	0.44	-2.1
11,158	-		EX31_RS14990	0.44	-1.3
11,158	-		EX31_RS14990	0.44	-1.7
11,158	-		EX31_RS14990	0.44	-2.0
11,158	-		EX31_RS14990	0.44	-1.7
11,158	-		EX31_RS14990	0.44	-2.7
11,166	-		EX31_RS14990	0.45	-3.5
11,166	-		EX31_RS14990	0.45	-4.6