Strain Fitness in Rahnella sp. WP5 around EX31_RS16410

Experiment: L-Serine (N); ShewMM media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); ShewMM media; shaking
32,378	+		EX31_RS16400	0.79	+0.3
32,378	+		EX31_RS16400	0.79	+0.3
32,470	-		EX31_RS16400	0.84	+0.9
32,470	-		EX31_RS16400	0.84	-0.2
32,531	+		EX31_RS16400	0.88	-0.2
32,559	-		EX31_RS16400	0.89	-1.0
32,575	+				+0.2
32,575	+				+0.1
32,575	+				+0.7
32,576	-				+1.1
32,576	-				-2.1
32,576	-				+1.5
32,580	+				+0.1
32,624	+				+0.2
32,624	+				+1.5
32,658	+				-0.0
32,659	-				+0.6
32,692	-				-1.4
32,692	-				-0.1
32,702	+				-0.4
32,702	+				-0.3
32,707	+				-0.4
32,724	+				+0.9
32,724	+				-1.6
32,724	+				+2.3
32,725	-				+0.3
32,725	-				-2.3
32,725	-				+1.1
32,725	-				-0.8
32,725	-				-1.1
32,744	+				+1.5
32,744	+				-0.8
32,744	+				+0.1
32,744	+				+1.0
32,755	+				+0.9
32,764	+				+1.4
32,799	+				-0.7
32,815	-				+0.3
32,827	+				+0.7
32,838	-				+1.0
32,838	-				-1.1
32,855	+				-0.4
32,855	+				-0.5
32,856	-				-0.5
32,856	-				+0.7
32,865	+				-0.0
32,865	+				+0.3
32,865	+				-1.8
32,866	-				+0.7
32,887	+				+1.5
32,891	+				-0.5
32,892	-				+0.9
32,892	-				-1.6
32,892	-				-1.3
32,892	-				+0.7
32,934	+				+3.5
32,934	+				-0.3
32,934	+				+2.0
32,934	+				-0.4
32,935	-				-0.3
32,935	-				+0.5
32,935	-				+0.1
32,935	-				+1.9
32,935	-				+0.3
32,947	+				-0.3
33,004	-				+1.3
33,020	+				+1.0
33,020	+				+0.1
33,109	-				+0.1
33,120	+				-0.7
33,121	-				+0.5
33,282	-				+0.5
33,286	-				-0.9
33,286	-				+0.4
33,322	+				-0.7
33,323	-				+0.3
33,323	-				+0.7
33,323	-				+0.1
33,323	-				+0.2
33,332	+				+0.9
33,332	+				+0.5
33,333	-				-0.1
33,333	-				-0.2
33,333	-				-1.0
33,333	-				-0.3
33,333	-				+0.2
33,333	-				+0.3
33,334	+				+1.3
33,334	+				+0.5
33,334	+				-0.5
33,334	+				-0.1
33,334	+				+0.1
33,334	+				+1.1
33,334	+				+0.6
33,334	+				-0.6
33,334	+				+1.9
33,334	+				+0.1
33,334	+				-0.1
33,335	-				-0.1
33,335	-				+1.3
33,335	-				+0.3
33,335	-				+0.0
33,335	-				-0.3
33,335	-				-0.5
33,335	-				+0.9
33,335	-				-0.1
33,335	-				-0.6
33,335	-				-0.7
33,335	-				-0.5
33,335	-				-0.2
33,335	-				-0.6
33,335	-				+1.4
33,335	-				-0.4
33,335	-				+0.2
33,335	-				-0.0
33,335	-				-0.4
33,335	-				+0.2
33,335	-				-0.2
33,335	-				+2.6
33,335	-				-0.7
33,335	-				-0.1
33,335	-				-0.3
33,335	-				-0.0
33,338	+				-0.5
33,338	+				+0.5
33,338	+				+0.9
33,338	+				+2.1
33,339	-				-0.1
33,339	-				-1.7
33,339	-				+0.5
33,339	-				-0.2
33,339	-				+0.3
33,339	-				-1.2
33,339	-				+0.6
33,339	-				+0.2
33,339	-				+0.8
33,339	-				-0.1
33,339	-				+0.6
33,339	-				+0.3
33,339	-				-0.1
33,340	+				+0.9
33,340	+				+0.8
33,341	-				-1.0
33,341	-				-0.9
33,341	-				+0.9
33,341	-				-0.1
33,341	-				+0.2
33,365	+		EX31_RS16410	0.12	-1.7
33,365	+		EX31_RS16410	0.12	+0.3
33,366	-		EX31_RS16410	0.12	-1.1
33,366	-		EX31_RS16410	0.12	-1.1
33,377	-		EX31_RS16410	0.14	+0.9
33,377	-		EX31_RS16410	0.14	-0.3
33,377	-		EX31_RS16410	0.14	-0.6
33,377	-		EX31_RS16410	0.14	+0.6
33,421	+		EX31_RS16410	0.20	+1.0
33,421	+		EX31_RS16410	0.20	+0.1
33,422	-		EX31_RS16410	0.21	-0.5
33,478	+		EX31_RS16410	0.29	+0.2
33,479	-		EX31_RS16410	0.29	+1.4
33,517	-		EX31_RS16410	0.35	-0.8
33,533	-		EX31_RS16410	0.38	-0.8
33,533	-		EX31_RS16410	0.38	-0.2
33,544	+		EX31_RS16410	0.40	-0.5
33,544	+		EX31_RS16410	0.40	-0.7
33,545	-		EX31_RS16410	0.40	-1.2
33,545	-		EX31_RS16410	0.40	-0.4
33,545	-		EX31_RS16410	0.40	+0.9
33,545	-		EX31_RS16410	0.40	-1.4
33,545	-		EX31_RS16410	0.40	-0.2
33,545	-		EX31_RS16410	0.40	-0.1
33,545	-		EX31_RS16410	0.40	-0.3
33,545	-		EX31_RS16410	0.40	-0.7
33,670	+		EX31_RS16410	0.59	-0.1
33,714	-		EX31_RS16410	0.66	+0.5
33,739	+		EX31_RS16410	0.70	-1.5
33,739	+		EX31_RS16410	0.70	-1.1
33,739	+		EX31_RS16410	0.70	-1.1
33,739	+		EX31_RS16410	0.70	+0.1
33,739	+		EX31_RS16410	0.70	-0.5
33,739	+		EX31_RS16410	0.70	-0.1
33,740	-		EX31_RS16410	0.70	-0.6
33,740	-		EX31_RS16410	0.70	-0.1
33,768	-		EX31_RS16410	0.74	+2.5
33,818	-		EX31_RS16410	0.82	-1.2
33,820	-		EX31_RS16410	0.83	+0.5
33,820	-		EX31_RS16410	0.83	-1.1
33,820	-		EX31_RS16410	0.83	-0.1
33,916	-				+0.2
33,953	+				-0.6
33,954	-				+2.0
33,954	-				+0.7
33,954	-				-0.7
33,966	+				+0.3
33,967	-				+0.7
33,967	-				-1.0
33,971	+				+1.5
33,971	+				-0.1
33,972	-				+0.9
33,972	-				-1.1
33,982	+				-0.2
33,982	+				+1.3
33,982	+				+0.8
33,982	+				+0.5
33,982	+				+0.9
33,983	-				+1.7
33,983	-				-0.2
33,983	-				-0.4
33,983	-				-1.8
33,983	-				-1.3
33,986	+				+0.6
33,986	+				+0.1
33,986	+				-0.1
33,987	-				+2.9
33,987	-				+0.4
33,987	-				-0.4
33,987	-				+2.3
33,987	-				-0.8
34,012	+				+0.9
34,013	-				+0.3
34,035	-				-0.5
34,036	+				+0.5
34,036	+				-0.5
34,059	+				+0.7
34,059	+				-0.6
34,059	+				+0.1
34,059	+				-1.6
34,060	-				+0.1
34,060	-				+1.5
34,085	+				+0.9
34,086	-				+0.2
34,096	+				+0.2
34,111	+				-0.7
34,111	+				+1.5
34,111	+				+0.7
34,112	-				+1.1
34,112	-				+0.2
34,123	+				+1.0
34,123	+				-1.5
34,124	-				+0.5
34,143	+				-0.2
34,143	+				+0.5
34,143	+				+1.2
34,143	+				-1.0
34,143	+				+0.9
34,143	+				+0.8
34,143	+				+0.8
34,143	+				+0.4
34,144	-				+2.3
34,144	-				-1.3
34,144	-				-0.7
34,145	+				+0.8
34,145	+				-0.4
34,145	+				+0.8
34,146	-				-1.2
34,168	-				-0.9
34,168	-				+0.8
34,168	-				-1.1
34,197	+				+0.2
34,258	-				+0.4
34,420	-				-0.5
34,447	-				+0.9
34,482	+				+0.5
34,482	+				+1.1
34,482	+				+0.1
34,483	-				+0.1
34,483	-				+0.5
34,483	-				-0.2
34,483	-				+0.4
34,483	-				+0.7
34,483	-				-1.3
34,510	-		EX31_RS16415	0.11	+0.4
34,541	+		EX31_RS16415	0.14	+1.9
34,541	+		EX31_RS16415	0.14	-0.8
34,541	+		EX31_RS16415	0.14	+1.1
34,541	+		EX31_RS16415	0.14	-1.8
34,541	+		EX31_RS16415	0.14	-0.6
34,541	+		EX31_RS16415	0.14	+0.1
34,541	+		EX31_RS16415	0.14	+0.5
34,541	+		EX31_RS16415	0.14	+0.5
34,541	+		EX31_RS16415	0.14	+1.1
34,541	+		EX31_RS16415	0.14	+0.5
34,541	+		EX31_RS16415	0.14	+0.2
34,541	+		EX31_RS16415	0.14	-0.7
34,541	+		EX31_RS16415	0.14	+1.9
34,541	+		EX31_RS16415	0.14	+0.5
34,542	-		EX31_RS16415	0.14	+2.0
34,542	-		EX31_RS16415	0.14	+0.9
34,542	-		EX31_RS16415	0.14	+0.3
34,542	-		EX31_RS16415	0.14	+1.7
34,542	-		EX31_RS16415	0.14	+0.9
34,542	-		EX31_RS16415	0.14	+0.9
34,542	-		EX31_RS16415	0.14	+1.0
34,542	-		EX31_RS16415	0.14	+1.9
34,542	-		EX31_RS16415	0.14	+0.7
34,542	-		EX31_RS16415	0.14	+0.1
34,542	-		EX31_RS16415	0.14	+1.2
34,542	-		EX31_RS16415	0.14	-0.5
34,545	+		EX31_RS16415	0.14	-0.3
34,579	+		EX31_RS16415	0.17	-0.4
34,579	+		EX31_RS16415	0.17	+0.9
34,579	+		EX31_RS16415	0.17	-0.5
34,579	+		EX31_RS16415	0.17	-0.5
34,579	+		EX31_RS16415	0.17	-0.5
34,579	+		EX31_RS16415	0.17	+0.3
34,579	+		EX31_RS16415	0.17	-0.7
34,579	+		EX31_RS16415	0.17	+0.5
34,579	+		EX31_RS16415	0.17	+0.3
34,579	+		EX31_RS16415	0.17	+2.9
34,579	+		EX31_RS16415	0.17	+0.8
34,579	+		EX31_RS16415	0.17	-0.7
34,579	+		EX31_RS16415	0.17	+1.0
34,579	+		EX31_RS16415	0.17	+1.9
34,579	+		EX31_RS16415	0.17	-0.9
34,579	+		EX31_RS16415	0.17	-0.0
34,579	+		EX31_RS16415	0.17	+1.9
34,579	+		EX31_RS16415	0.17	-1.7
34,580	-		EX31_RS16415	0.17	+0.0
34,580	-		EX31_RS16415	0.17	+1.0
34,580	-		EX31_RS16415	0.17	+0.3
34,580	-		EX31_RS16415	0.17	-0.2
34,580	-		EX31_RS16415	0.17	+0.1
34,580	-		EX31_RS16415	0.17	-0.5
34,580	-		EX31_RS16415	0.17	+1.1
34,580	-		EX31_RS16415	0.17	+1.0
34,580	-		EX31_RS16415	0.17	+0.1
34,580	-		EX31_RS16415	0.17	+0.3
34,580	-		EX31_RS16415	0.17	-0.1
34,580	-		EX31_RS16415	0.17	+1.9
34,580	-		EX31_RS16415	0.17	-0.7
34,580	-		EX31_RS16415	0.17	-0.1
34,580	-		EX31_RS16415	0.17	+0.9
34,580	-		EX31_RS16415	0.17	+0.9
34,580	-		EX31_RS16415	0.17	+0.9
34,580	-		EX31_RS16415	0.17	+0.1
34,602	+		EX31_RS16415	0.19	+0.6
34,602	+		EX31_RS16415	0.19	-0.5
34,603	-		EX31_RS16415	0.19	+1.0
34,603	-		EX31_RS16415	0.19	-0.8
34,672	-		EX31_RS16415	0.24	+2.2
34,703	+		EX31_RS16415	0.27	+0.5
34,703	+		EX31_RS16415	0.27	-1.5
34,703	+		EX31_RS16415	0.27	-0.2
34,703	+		EX31_RS16415	0.27	+0.7
34,703	+		EX31_RS16415	0.27	+0.8
34,703	+		EX31_RS16415	0.27	-0.6
34,703	+		EX31_RS16415	0.27	+1.2
34,703	+		EX31_RS16415	0.27	-0.9
34,704	-		EX31_RS16415	0.27	+1.7
34,704	-		EX31_RS16415	0.27	-1.0
34,704	-		EX31_RS16415	0.27	-0.5
34,709	+		EX31_RS16415	0.27	+0.9
34,709	+		EX31_RS16415	0.27	+0.5
34,709	+		EX31_RS16415	0.27	+0.3
34,709	+		EX31_RS16415	0.27	+0.7
34,709	+		EX31_RS16415	0.27	-1.7
34,709	+		EX31_RS16415	0.27	-1.7
34,709	+		EX31_RS16415	0.27	+0.8
34,709	+		EX31_RS16415	0.27	-0.5
34,709	+		EX31_RS16415	0.27	+0.3
34,709	+		EX31_RS16415	0.27	+0.9
34,709	+		EX31_RS16415	0.27	+0.8
34,709	+		EX31_RS16415	0.27	+0.3
34,709	+		EX31_RS16415	0.27	+0.3
34,709	+		EX31_RS16415	0.27	-0.5
34,709	+		EX31_RS16415	0.27	+0.1
34,709	+		EX31_RS16415	0.27	-1.0
34,710	-		EX31_RS16415	0.28	+0.9
34,710	-		EX31_RS16415	0.28	+0.2
34,710	-		EX31_RS16415	0.28	+0.5
34,710	-		EX31_RS16415	0.28	+0.9
34,710	-		EX31_RS16415	0.28	+0.9
34,710	-		EX31_RS16415	0.28	+1.7
34,710	-		EX31_RS16415	0.28	-0.2
34,710	-		EX31_RS16415	0.28	+0.7
34,710	-		EX31_RS16415	0.28	-0.0
34,710	-		EX31_RS16415	0.28	-1.1
34,710	-		EX31_RS16415	0.28	-1.5
34,710	-		EX31_RS16415	0.28	-2.0
34,710	-		EX31_RS16415	0.28	+0.9
34,710	-		EX31_RS16415	0.28	+0.2
34,710	-		EX31_RS16415	0.28	+0.3
34,710	-		EX31_RS16415	0.28	-0.4
34,710	-		EX31_RS16415	0.28	+1.1
34,710	-		EX31_RS16415	0.28	+2.1
34,710	-		EX31_RS16415	0.28	+0.9
34,710	-		EX31_RS16415	0.28	-0.5
34,710	-		EX31_RS16415	0.28	-0.4
34,733	+		EX31_RS16415	0.29	+2.5
34,734	-		EX31_RS16415	0.29	-0.5
34,734	-		EX31_RS16415	0.29	+1.5
34,734	-		EX31_RS16415	0.29	-0.2
34,734	-		EX31_RS16415	0.29	+1.5
34,734	-		EX31_RS16415	0.29	-1.7
34,734	-		EX31_RS16415	0.29	+0.0
34,769	+		EX31_RS16415	0.32	+0.6
34,812	+		EX31_RS16415	0.36	+0.9
34,812	+		EX31_RS16415	0.36	-0.2
34,813	-		EX31_RS16415	0.36	-0.3
34,833	+		EX31_RS16415	0.37	+0.7
34,833	+		EX31_RS16415	0.37	+1.3
34,833	+		EX31_RS16415	0.37	+0.5
34,834	-		EX31_RS16415	0.38	+0.7
34,834	-		EX31_RS16415	0.38	+1.9
34,834	-		EX31_RS16415	0.38	-0.8
34,848	+		EX31_RS16415	0.39	-1.1
34,848	+		EX31_RS16415	0.39	-0.2
34,848	+		EX31_RS16415	0.39	+0.1
34,848	+		EX31_RS16415	0.39	+0.2
34,849	-		EX31_RS16415	0.39	-0.0
34,849	-		EX31_RS16415	0.39	+0.4
34,855	+		EX31_RS16415	0.39	+0.7
34,855	+		EX31_RS16415	0.39	+0.3
34,855	+		EX31_RS16415	0.39	+0.8
34,855	+		EX31_RS16415	0.39	-0.9
34,855	+		EX31_RS16415	0.39	+1.0
34,855	+		EX31_RS16415	0.39	+0.8
34,855	+		EX31_RS16415	0.39	-0.8
34,856	-		EX31_RS16415	0.39	-1.3
34,856	-		EX31_RS16415	0.39	-0.2
34,856	-		EX31_RS16415	0.39	+2.6
34,856	-		EX31_RS16415	0.39	+0.9
34,859	-		EX31_RS16415	0.40	+0.2
34,859	-		EX31_RS16415	0.40	+0.6
34,859	-		EX31_RS16415	0.40	+0.8
34,859	-		EX31_RS16415	0.40	+0.1
34,887	+		EX31_RS16415	0.42	+0.9
34,887	+		EX31_RS16415	0.42	+0.8
34,887	+		EX31_RS16415	0.42	+0.1
34,887	+		EX31_RS16415	0.42	-1.0
34,887	+		EX31_RS16415	0.42	+1.5
34,887	+		EX31_RS16415	0.42	-0.3
34,887	+		EX31_RS16415	0.42	+1.5
34,887	+		EX31_RS16415	0.42	+0.3
34,887	+		EX31_RS16415	0.42	-0.1
34,893	+		EX31_RS16415	0.42	+1.3
34,893	+		EX31_RS16415	0.42	-0.5
34,893	+		EX31_RS16415	0.42	+2.1
34,893	+		EX31_RS16415	0.42	-1.5
34,893	+		EX31_RS16415	0.42	-0.5
34,893	+		EX31_RS16415	0.42	-0.2
34,893	+		EX31_RS16415	0.42	-1.6
34,893	+		EX31_RS16415	0.42	-0.9
34,893	+		EX31_RS16415	0.42	-0.5
34,898	+		EX31_RS16415	0.43	+1.0
34,898	+		EX31_RS16415	0.43	+0.2
34,898	+		EX31_RS16415	0.43	+0.1
34,898	+		EX31_RS16415	0.43	+0.1
34,898	+		EX31_RS16415	0.43	-0.9
34,898	+		EX31_RS16415	0.43	+1.5
34,898	+		EX31_RS16415	0.43	+0.2
34,898	+		EX31_RS16415	0.43	-0.2
34,898	+		EX31_RS16415	0.43	+1.3
34,898	+		EX31_RS16415	0.43	-0.7
34,898	+		EX31_RS16415	0.43	+0.8
34,898	+		EX31_RS16415	0.43	+1.0
34,898	+		EX31_RS16415	0.43	-1.4
34,898	+		EX31_RS16415	0.43	+0.5
34,898	+		EX31_RS16415	0.43	-1.3
34,898	+		EX31_RS16415	0.43	-0.6
34,898	+		EX31_RS16415	0.43	-0.7
34,898	+		EX31_RS16415	0.43	-0.0
34,899	-		EX31_RS16415	0.43	+2.1
34,899	-		EX31_RS16415	0.43	+1.9
34,899	-		EX31_RS16415	0.43	+0.8
34,917	+		EX31_RS16415	0.44	-0.3
34,917	+		EX31_RS16415	0.44	+0.8
34,918	-		EX31_RS16415	0.44	+0.5
34,918	-		EX31_RS16415	0.44	-2.3
34,918	-		EX31_RS16415	0.44	+3.9
34,918	-		EX31_RS16415	0.44	-0.6
34,919	+		EX31_RS16415	0.44	-0.1
34,919	+		EX31_RS16415	0.44	+0.5
34,919	+		EX31_RS16415	0.44	-0.6
34,919	+		EX31_RS16415	0.44	-1.8
34,919	+		EX31_RS16415	0.44	+0.4
34,919	+		EX31_RS16415	0.44	+0.4
34,920	-		EX31_RS16415	0.44	-0.3
34,920	-		EX31_RS16415	0.44	+0.4
34,920	-		EX31_RS16415	0.44	+0.5