Experiment: Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_614 and Ac3H11_615 are separated by 99 nucleotides
Ac3H11_614 - L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) <small>(from data)</small>, at 53,977 to 54,819
_614
Ac3H11_615 - L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) <small>(from data)</small>, at 54,919 to 55,869
_615
Position (kb) 53
54
55 Strain fitness (log2 ratio) -2
-1
0
1 at 53.797 kb on + strand at 54.260 kb on + strand, within Ac3H11_614 at 54.260 kb on + strand, within Ac3H11_614 at 54.260 kb on + strand, within Ac3H11_614 at 54.261 kb on - strand, within Ac3H11_614 at 54.261 kb on - strand, within Ac3H11_614 at 54.261 kb on - strand, within Ac3H11_614 at 54.261 kb on - strand, within Ac3H11_614 at 54.261 kb on - strand, within Ac3H11_614 at 54.276 kb on + strand, within Ac3H11_614 at 54.404 kb on + strand, within Ac3H11_614 at 54.405 kb on - strand, within Ac3H11_614 at 54.405 kb on - strand, within Ac3H11_614 at 54.407 kb on + strand, within Ac3H11_614 at 54.407 kb on + strand, within Ac3H11_614 at 54.408 kb on - strand, within Ac3H11_614 at 54.432 kb on + strand, within Ac3H11_614 at 54.433 kb on - strand, within Ac3H11_614 at 54.433 kb on - strand, within Ac3H11_614 at 54.858 kb on + strand at 54.896 kb on - strand at 55.369 kb on + strand, within Ac3H11_615 at 55.370 kb on - strand, within Ac3H11_615 at 55.370 kb on - strand, within Ac3H11_615 at 55.498 kb on + strand, within Ac3H11_615 at 55.498 kb on + strand, within Ac3H11_615 at 55.505 kb on - strand, within Ac3H11_615
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 20 mM remove 53,797 + +1.5 54,260 + Ac3H11_614 0.34 -0.7 54,260 + Ac3H11_614 0.34 -0.4 54,260 + Ac3H11_614 0.34 -0.8 54,261 - Ac3H11_614 0.34 +0.3 54,261 - Ac3H11_614 0.34 -0.5 54,261 - Ac3H11_614 0.34 -1.2 54,261 - Ac3H11_614 0.34 -0.5 54,261 - Ac3H11_614 0.34 +0.4 54,276 + Ac3H11_614 0.35 +0.0 54,404 + Ac3H11_614 0.51 -0.4 54,405 - Ac3H11_614 0.51 +0.4 54,405 - Ac3H11_614 0.51 -1.2 54,407 + Ac3H11_614 0.51 -0.3 54,407 + Ac3H11_614 0.51 -0.4 54,408 - Ac3H11_614 0.51 -1.0 54,432 + Ac3H11_614 0.54 -0.2 54,433 - Ac3H11_614 0.54 +0.4 54,433 - Ac3H11_614 0.54 +0.1 54,858 + -0.2 54,896 - +0.3 55,369 + Ac3H11_615 0.47 -0.2 55,370 - Ac3H11_615 0.47 -0.7 55,370 - Ac3H11_615 0.47 -0.1 55,498 + Ac3H11_615 0.61 -2.2 55,498 + Ac3H11_615 0.61 -0.9 55,505 - Ac3H11_615 0.62 +0.7
Or see this region's nucleotide sequence