Experiment: Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3763 and Ac3H11_3764 are separated by 21 nucleotides Ac3H11_3764 and Ac3H11_3765 are separated by 50 nucleotides Ac3H11_3765 and Ac3H11_3766 overlap by 4 nucleotides Ac3H11_3766 and Ac3H11_3767 are separated by 2 nucleotides
Ac3H11_3763 - Phage transposase, at 15,162 to 16,940
_3763
Ac3H11_3764 - Phage protein, at 16,962 to 17,843
_3764
Ac3H11_3765 - Transcriptional regulator, IclR family, at 17,894 to 18,232
_3765
Ac3H11_3766 - hypothetical protein, at 18,229 to 18,477
_3766
Ac3H11_3767 - phage-related hypothetical protein, at 18,480 to 18,950
_3767
Position (kb)
16
17
18 Strain fitness (log2 ratio)
-2
-1
0
1 at 16.276 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.343 kb on + strand, within Ac3H11_3763 at 16.433 kb on - strand, within Ac3H11_3763 at 16.540 kb on + strand, within Ac3H11_3763 at 16.541 kb on - strand, within Ac3H11_3763 at 16.852 kb on + strand at 16.852 kb on + strand at 16.963 kb on + strand at 17.124 kb on + strand, within Ac3H11_3764 at 17.246 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.737 kb on - strand, within Ac3H11_3764 at 17.737 kb on - strand, within Ac3H11_3764 at 17.847 kb on + strand at 17.847 kb on + strand at 18.064 kb on + strand, within Ac3H11_3765 at 18.190 kb on + strand, within Ac3H11_3765 at 18.529 kb on + strand, within Ac3H11_3767 at 18.601 kb on + strand, within Ac3H11_3767 at 18.736 kb on + strand, within Ac3H11_3767 at 18.736 kb on + strand, within Ac3H11_3767
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 20 mM remove 16,276 + Ac3H11_3763 0.63 +0.1 16,276 + Ac3H11_3763 0.63 -2.6 16,276 + Ac3H11_3763 0.63 -1.6 16,343 + Ac3H11_3763 0.66 +0.2 16,433 - Ac3H11_3763 0.71 +0.6 16,540 + Ac3H11_3763 0.77 +0.2 16,541 - Ac3H11_3763 0.78 -1.2 16,852 + -0.8 16,852 + +0.0 16,963 + +1.4 17,124 + Ac3H11_3764 0.18 -0.3 17,246 + Ac3H11_3764 0.32 +0.2 17,736 + Ac3H11_3764 0.88 -0.6 17,736 + Ac3H11_3764 0.88 -1.2 17,736 + Ac3H11_3764 0.88 -1.8 17,736 + Ac3H11_3764 0.88 -1.6 17,737 - Ac3H11_3764 0.88 -2.4 17,737 - Ac3H11_3764 0.88 -0.8 17,847 + -0.2 17,847 + -0.8 18,064 + Ac3H11_3765 0.50 -1.1 18,190 + Ac3H11_3765 0.87 -0.1 18,529 + Ac3H11_3767 0.10 -0.3 18,601 + Ac3H11_3767 0.26 -0.1 18,736 + Ac3H11_3767 0.54 -1.5 18,736 + Ac3H11_3767 0.54 -2.3
Or see this region's nucleotide sequence