Experiment: Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3685 and Ac3H11_3686 overlap by 4 nucleotides Ac3H11_3686 and Ac3H11_3687 are separated by 119 nucleotides Ac3H11_3687 and Ac3H11_3688 are separated by 64 nucleotides Ac3H11_3688 and Ac3H11_3689 are separated by 7 nucleotides
Ac3H11_3685 - Urease accessory protein UreG, at 43,393 to 44,076
_3685
Ac3H11_3686 - Urease accessory protein UreF, at 44,073 to 44,783
_3686
Ac3H11_3687 - Urease accessory protein UreE, at 44,903 to 45,553
_3687
Ac3H11_3688 - Histone acetyltransferase HPA2, at 45,618 to 46,106
_3688
Ac3H11_3689 - Urease alpha subunit (EC 3.5.1.5), at 46,114 to 47,832
_3689
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1
2 at 43.910 kb on + strand, within Ac3H11_3685 at 43.910 kb on + strand, within Ac3H11_3685 at 43.910 kb on + strand, within Ac3H11_3685 at 43.911 kb on - strand, within Ac3H11_3685 at 43.940 kb on + strand, within Ac3H11_3685 at 44.096 kb on - strand at 44.096 kb on - strand at 44.362 kb on + strand, within Ac3H11_3686 at 44.363 kb on - strand, within Ac3H11_3686 at 44.363 kb on - strand, within Ac3H11_3686 at 45.255 kb on + strand, within Ac3H11_3687 at 45.255 kb on + strand, within Ac3H11_3687 at 45.704 kb on - strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.127 kb on + strand at 46.127 kb on + strand at 46.128 kb on - strand at 46.196 kb on + strand at 46.197 kb on - strand at 46.197 kb on - strand at 46.229 kb on + strand at 46.229 kb on + strand at 46.229 kb on + strand at 46.229 kb on + strand at 46.230 kb on - strand at 46.230 kb on - strand at 46.230 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 20 mM remove 43,910 + Ac3H11_3685 0.76 -0.2 43,910 + Ac3H11_3685 0.76 -0.1 43,910 + Ac3H11_3685 0.76 +0.2 43,911 - Ac3H11_3685 0.76 +1.1 43,940 + Ac3H11_3685 0.80 +0.0 44,096 - -0.8 44,096 - +1.9 44,362 + Ac3H11_3686 0.41 -0.2 44,363 - Ac3H11_3686 0.41 -0.3 44,363 - Ac3H11_3686 0.41 -0.1 45,255 + Ac3H11_3687 0.54 -0.6 45,255 + Ac3H11_3687 0.54 -0.8 45,704 - Ac3H11_3688 0.18 +0.4 46,012 + Ac3H11_3688 0.81 -0.8 46,012 + Ac3H11_3688 0.81 +0.6 46,012 + Ac3H11_3688 0.81 +0.1 46,012 + Ac3H11_3688 0.81 -0.2 46,012 + Ac3H11_3688 0.81 +0.0 46,012 + Ac3H11_3688 0.81 +0.9 46,012 + Ac3H11_3688 0.81 +0.1 46,012 + Ac3H11_3688 0.81 -0.5 46,012 + Ac3H11_3688 0.81 +0.4 46,012 + Ac3H11_3688 0.81 -0.3 46,012 + Ac3H11_3688 0.81 -0.2 46,012 + Ac3H11_3688 0.81 -1.3 46,013 - Ac3H11_3688 0.81 +0.4 46,013 - Ac3H11_3688 0.81 +1.3 46,013 - Ac3H11_3688 0.81 -0.1 46,013 - Ac3H11_3688 0.81 +0.6 46,013 - Ac3H11_3688 0.81 -0.1 46,013 - Ac3H11_3688 0.81 -1.5 46,013 - Ac3H11_3688 0.81 -0.6 46,013 - Ac3H11_3688 0.81 -0.0 46,013 - Ac3H11_3688 0.81 +0.8 46,013 - Ac3H11_3688 0.81 -1.1 46,013 - Ac3H11_3688 0.81 +0.3 46,127 + -0.4 46,127 + -0.4 46,128 - +0.2 46,196 + +0.6 46,197 - -1.5 46,197 - -0.7 46,229 + -0.0 46,229 + +0.4 46,229 + -1.5 46,229 + -1.4 46,230 - -0.2 46,230 - -0.1 46,230 - -0.1
Or see this region's nucleotide sequence