Experiment: benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31390 and AZOBR_RS31395 are separated by 48 nucleotides AZOBR_RS31395 and AZOBR_RS31400 are separated by 132 nucleotides AZOBR_RS31400 and AZOBR_RS31405 are separated by 124 nucleotides
AZOBR_RS31390: AZOBR_RS31390 - 3-ketoacyl-ACP reductase, at 411,166 to 411,924
_RS31390
AZOBR_RS31395: AZOBR_RS31395 - cupin, at 411,973 to 412,308
_RS31395
AZOBR_RS31400: AZOBR_RS31400 - C4-dicarboxylate ABC transporter, at 412,441 to 413,430
_RS31400
AZOBR_RS31405: AZOBR_RS31405 - C4-dicarboxylate ABC transporter permease, at 413,555 to 414,043
_RS31405
Position (kb) 412
413
414 Strain fitness (log2 ratio) -2
-1
0
1
2 at 411.634 kb on + strand, within AZOBR_RS31390 at 411.730 kb on + strand, within AZOBR_RS31390 at 411.958 kb on - strand at 412.210 kb on + strand, within AZOBR_RS31395 at 412.210 kb on + strand, within AZOBR_RS31395 at 412.210 kb on + strand, within AZOBR_RS31395 at 412.211 kb on - strand, within AZOBR_RS31395 at 412.211 kb on - strand, within AZOBR_RS31395 at 412.211 kb on - strand, within AZOBR_RS31395 at 412.417 kb on + strand at 412.418 kb on - strand at 412.418 kb on - strand at 412.440 kb on + strand at 412.440 kb on + strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.561 kb on + strand, within AZOBR_RS31400 at 412.585 kb on + strand, within AZOBR_RS31400 at 412.585 kb on + strand, within AZOBR_RS31400 at 412.586 kb on - strand, within AZOBR_RS31400 at 412.586 kb on - strand, within AZOBR_RS31400 at 412.639 kb on + strand, within AZOBR_RS31400 at 412.876 kb on + strand, within AZOBR_RS31400 at 412.876 kb on + strand, within AZOBR_RS31400 at 412.877 kb on - strand, within AZOBR_RS31400 at 412.900 kb on + strand, within AZOBR_RS31400 at 412.901 kb on - strand, within AZOBR_RS31400 at 412.901 kb on - strand, within AZOBR_RS31400 at 412.901 kb on - strand, within AZOBR_RS31400 at 412.918 kb on + strand, within AZOBR_RS31400 at 412.919 kb on - strand, within AZOBR_RS31400 at 413.035 kb on + strand, within AZOBR_RS31400 at 413.036 kb on - strand, within AZOBR_RS31400 at 413.036 kb on - strand, within AZOBR_RS31400 at 413.036 kb on - strand, within AZOBR_RS31400 at 413.036 kb on - strand, within AZOBR_RS31400 at 413.036 kb on - strand, within AZOBR_RS31400 at 413.080 kb on + strand, within AZOBR_RS31400 at 413.081 kb on - strand, within AZOBR_RS31400 at 413.122 kb on + strand, within AZOBR_RS31400 at 413.245 kb on + strand, within AZOBR_RS31400 at 413.246 kb on - strand, within AZOBR_RS31400 at 413.246 kb on - strand, within AZOBR_RS31400 at 413.365 kb on + strand at 413.366 kb on - strand at 413.428 kb on + strand at 413.428 kb on + strand at 413.428 kb on + strand at 413.428 kb on + strand at 413.428 kb on + strand at 413.428 kb on + strand at 413.429 kb on - strand at 413.429 kb on - strand at 413.429 kb on - strand at 413.429 kb on - strand at 413.429 kb on - strand at 413.429 kb on - strand at 413.429 kb on - strand at 413.867 kb on + strand, within AZOBR_RS31405 at 413.867 kb on + strand, within AZOBR_RS31405 at 413.904 kb on - strand, within AZOBR_RS31405 at 413.904 kb on - strand, within AZOBR_RS31405 at 413.904 kb on - strand, within AZOBR_RS31405 at 413.904 kb on - strand, within AZOBR_RS31405 at 413.904 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 413.907 kb on - strand, within AZOBR_RS31405 at 414.308 kb on + strand at 414.344 kb on + strand at 414.344 kb on + strand at 414.344 kb on + strand at 414.344 kb on + strand at 414.344 kb on + strand at 414.344 kb on + strand at 414.345 kb on - strand at 414.345 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.29 mg/ml remove 411,634 + AZOBR_RS31390 0.62 -0.2 411,730 + AZOBR_RS31390 0.74 -1.4 411,958 - +0.1 412,210 + AZOBR_RS31395 0.71 +0.1 412,210 + AZOBR_RS31395 0.71 -0.0 412,210 + AZOBR_RS31395 0.71 +0.2 412,211 - AZOBR_RS31395 0.71 +0.1 412,211 - AZOBR_RS31395 0.71 +0.5 412,211 - AZOBR_RS31395 0.71 +0.0 412,417 + +0.4 412,418 - -0.5 412,418 - -0.1 412,440 + +0.3 412,440 + +0.3 412,441 - +1.8 412,441 - -0.3 412,441 - -0.3 412,441 - -0.3 412,441 - -0.3 412,561 + AZOBR_RS31400 0.12 +0.6 412,585 + AZOBR_RS31400 0.15 -0.2 412,585 + AZOBR_RS31400 0.15 +0.0 412,586 - AZOBR_RS31400 0.15 -0.8 412,586 - AZOBR_RS31400 0.15 +0.5 412,639 + AZOBR_RS31400 0.20 +0.6 412,876 + AZOBR_RS31400 0.44 -0.5 412,876 + AZOBR_RS31400 0.44 +0.5 412,877 - AZOBR_RS31400 0.44 +0.9 412,900 + AZOBR_RS31400 0.46 +0.6 412,901 - AZOBR_RS31400 0.46 +0.2 412,901 - AZOBR_RS31400 0.46 -0.4 412,901 - AZOBR_RS31400 0.46 +0.4 412,918 + AZOBR_RS31400 0.48 +0.9 412,919 - AZOBR_RS31400 0.48 -0.1 413,035 + AZOBR_RS31400 0.60 -0.3 413,036 - AZOBR_RS31400 0.60 +0.3 413,036 - AZOBR_RS31400 0.60 -0.6 413,036 - AZOBR_RS31400 0.60 +0.1 413,036 - AZOBR_RS31400 0.60 +1.2 413,036 - AZOBR_RS31400 0.60 -0.3 413,080 + AZOBR_RS31400 0.65 -0.1 413,081 - AZOBR_RS31400 0.65 +0.0 413,122 + AZOBR_RS31400 0.69 +0.7 413,245 + AZOBR_RS31400 0.81 +0.6 413,246 - AZOBR_RS31400 0.81 +0.1 413,246 - AZOBR_RS31400 0.81 -1.0 413,365 + -0.5 413,366 - -0.6 413,428 + +0.5 413,428 + +0.2 413,428 + +0.3 413,428 + -0.9 413,428 + -0.3 413,428 + -0.7 413,429 - +0.8 413,429 - -1.4 413,429 - +0.4 413,429 - +0.1 413,429 - +0.3 413,429 - -0.6 413,429 - -0.8 413,867 + AZOBR_RS31405 0.64 -0.4 413,867 + AZOBR_RS31405 0.64 -0.1 413,904 - AZOBR_RS31405 0.71 +0.4 413,904 - AZOBR_RS31405 0.71 +0.0 413,904 - AZOBR_RS31405 0.71 +0.3 413,904 - AZOBR_RS31405 0.71 -0.7 413,904 - AZOBR_RS31405 0.71 +0.1 413,907 - AZOBR_RS31405 0.72 -2.0 413,907 - AZOBR_RS31405 0.72 -0.1 413,907 - AZOBR_RS31405 0.72 +0.2 413,907 - AZOBR_RS31405 0.72 -0.5 413,907 - AZOBR_RS31405 0.72 +0.2 413,907 - AZOBR_RS31405 0.72 -1.0 413,907 - AZOBR_RS31405 0.72 -0.5 413,907 - AZOBR_RS31405 0.72 -0.0 414,308 + +0.2 414,344 + -0.3 414,344 + +0.7 414,344 + +0.1 414,344 + +0.5 414,344 + +0.3 414,344 + -0.4 414,345 - +0.1 414,345 - -0.1
Or see this region's nucleotide sequence