Experiment: benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31250 and AZOBR_RS31255 are separated by 8 nucleotides AZOBR_RS31255 and AZOBR_RS31260 are separated by 111 nucleotides
AZOBR_RS31250: AZOBR_RS31250 - ABC transporter permease, at 375,941 to 377,152
_RS31250
AZOBR_RS31255: AZOBR_RS31255 - galactose 1-dehydrogenase, at 377,161 to 378,138
_RS31255
AZOBR_RS31260: AZOBR_RS31260 - dihydroxy-acid dehydratase, at 378,250 to 380,076
_RS31260
Position (kb) 377
378
379 Strain fitness (log2 ratio) -1
0
1
2
3 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.659 kb on - strand at 376.659 kb on - strand, within AZOBR_RS31250 at 376.659 kb on - strand, within AZOBR_RS31250 at 376.733 kb on + strand, within AZOBR_RS31250 at 376.734 kb on - strand, within AZOBR_RS31250 at 376.734 kb on - strand, within AZOBR_RS31250 at 376.841 kb on + strand, within AZOBR_RS31250 at 377.132 kb on + strand at 377.132 kb on + strand at 377.133 kb on - strand at 377.133 kb on - strand at 377.923 kb on - strand, within AZOBR_RS31255 at 378.004 kb on + strand, within AZOBR_RS31255 at 378.004 kb on + strand, within AZOBR_RS31255 at 378.016 kb on + strand, within AZOBR_RS31255 at 378.017 kb on - strand, within AZOBR_RS31255 at 378.136 kb on + strand at 378.136 kb on + strand at 378.359 kb on - strand at 378.359 kb on - strand at 378.359 kb on - strand at 378.371 kb on - strand at 378.994 kb on + strand, within AZOBR_RS31260 at 378.995 kb on - strand, within AZOBR_RS31260 at 378.995 kb on - strand, within AZOBR_RS31260
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.29 mg/ml remove 376,658 + AZOBR_RS31250 0.59 +0.1 376,658 + AZOBR_RS31250 0.59 +0.4 376,658 + AZOBR_RS31250 0.59 +0.1 376,658 + AZOBR_RS31250 0.59 -1.5 376,658 + AZOBR_RS31250 0.59 +0.5 376,659 - +2.8 376,659 - AZOBR_RS31250 0.59 +0.2 376,659 - AZOBR_RS31250 0.59 -0.7 376,733 + AZOBR_RS31250 0.65 -0.1 376,734 - AZOBR_RS31250 0.65 +0.4 376,734 - AZOBR_RS31250 0.65 +0.2 376,841 + AZOBR_RS31250 0.74 +0.3 377,132 + -0.1 377,132 + -0.3 377,133 - +0.1 377,133 - +0.1 377,923 - AZOBR_RS31255 0.78 +0.0 378,004 + AZOBR_RS31255 0.86 -0.3 378,004 + AZOBR_RS31255 0.86 +0.4 378,016 + AZOBR_RS31255 0.87 -0.3 378,017 - AZOBR_RS31255 0.88 -0.5 378,136 + +0.2 378,136 + +0.1 378,359 - +0.3 378,359 - +0.2 378,359 - +0.1 378,371 - -0.5 378,994 + AZOBR_RS31260 0.41 -0.3 378,995 - AZOBR_RS31260 0.41 -0.3 378,995 - AZOBR_RS31260 0.41 +0.1
Or see this region's nucleotide sequence