Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS29685
Experiment: benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | benzoic 0.29 mg/ml |
---|---|---|---|---|---|
remove | |||||
7,572 | + | AZOBR_RS29675 | 0.87 | -0.1 | |
8,486 | + | -0.4 | |||
8,487 | - | -0.7 | |||
8,487 | - | +0.1 | |||
8,512 | + | +0.2 | |||
8,513 | - | -0.2 | |||
8,812 | - | AZOBR_RS29685 | 0.43 | -1.4 | |
9,090 | + | AZOBR_RS29685 | 0.83 | -0.9 | |
9,091 | - | AZOBR_RS29685 | 0.83 | -0.2 | |
9,091 | - | AZOBR_RS29685 | 0.83 | -0.3 | |
9,120 | + | AZOBR_RS29685 | 0.87 | -0.1 | |
9,120 | + | AZOBR_RS29685 | 0.87 | -0.7 | |
9,198 | + | -2.5 | |||
9,211 | - | -0.2 | |||
9,245 | + | -0.7 | |||
9,730 | + | AZOBR_RS29690 | 0.21 | -0.2 | |
9,937 | + | AZOBR_RS29690 | 0.30 | -1.4 | |
9,937 | + | AZOBR_RS29690 | 0.30 | -0.7 | |
9,938 | - | AZOBR_RS29690 | 0.30 | -0.8 | |
9,938 | - | AZOBR_RS29690 | 0.30 | +0.1 | |
9,938 | - | AZOBR_RS29690 | 0.30 | +0.5 | |
10,125 | + | AZOBR_RS29690 | 0.38 | -0.1 |
Or see this region's nucleotide sequence