Experiment: benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25680 and AZOBR_RS25685 are separated by 97 nucleotides AZOBR_RS25685 and AZOBR_RS25690 are separated by 51 nucleotides
AZOBR_RS25680: AZOBR_RS25680 - hypothetical protein, at 810,681 to 811,502
_RS25680
AZOBR_RS25685: AZOBR_RS25685 - hypothetical protein, at 811,600 to 811,965
_RS25685
AZOBR_RS25690: AZOBR_RS25690 - signal peptide protein, at 812,017 to 812,706
_RS25690
Position (kb) 811
812 Strain fitness (log2 ratio) -1
0
1 at 810.743 kb on - strand at 810.743 kb on - strand at 810.751 kb on + strand at 810.802 kb on + strand, within AZOBR_RS25680 at 810.802 kb on + strand, within AZOBR_RS25680 at 811.283 kb on + strand, within AZOBR_RS25680 at 811.283 kb on + strand, within AZOBR_RS25680 at 811.284 kb on - strand, within AZOBR_RS25680 at 811.284 kb on - strand, within AZOBR_RS25680 at 811.321 kb on + strand, within AZOBR_RS25680 at 811.321 kb on + strand, within AZOBR_RS25680 at 811.322 kb on - strand, within AZOBR_RS25680 at 811.630 kb on + strand at 811.631 kb on - strand at 811.642 kb on + strand, within AZOBR_RS25685 at 811.643 kb on - strand, within AZOBR_RS25685 at 811.643 kb on - strand, within AZOBR_RS25685 at 811.870 kb on + strand, within AZOBR_RS25685 at 811.871 kb on - strand, within AZOBR_RS25685 at 811.871 kb on - strand at 811.871 kb on - strand, within AZOBR_RS25685 at 812.180 kb on + strand, within AZOBR_RS25690 at 812.181 kb on - strand, within AZOBR_RS25690 at 812.181 kb on - strand, within AZOBR_RS25690 at 812.181 kb on - strand, within AZOBR_RS25690 at 812.441 kb on + strand, within AZOBR_RS25690 at 812.442 kb on - strand, within AZOBR_RS25690 at 812.442 kb on - strand, within AZOBR_RS25690 at 812.512 kb on + strand, within AZOBR_RS25690 at 812.512 kb on + strand, within AZOBR_RS25690 at 812.737 kb on - strand at 812.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.29 mg/ml remove 810,743 - +0.0 810,743 - +0.2 810,751 + -0.2 810,802 + AZOBR_RS25680 0.15 +0.1 810,802 + AZOBR_RS25680 0.15 -0.2 811,283 + AZOBR_RS25680 0.73 +0.2 811,283 + AZOBR_RS25680 0.73 -1.7 811,284 - AZOBR_RS25680 0.73 +0.1 811,284 - AZOBR_RS25680 0.73 -0.4 811,321 + AZOBR_RS25680 0.78 +0.2 811,321 + AZOBR_RS25680 0.78 +0.1 811,322 - AZOBR_RS25680 0.78 +0.3 811,630 + +0.9 811,631 - -0.4 811,642 + AZOBR_RS25685 0.11 +0.2 811,643 - AZOBR_RS25685 0.12 +0.8 811,643 - AZOBR_RS25685 0.12 -0.1 811,870 + AZOBR_RS25685 0.74 +0.6 811,871 - AZOBR_RS25685 0.74 +0.7 811,871 - +0.5 811,871 - AZOBR_RS25685 0.74 +0.8 812,180 + AZOBR_RS25690 0.24 -0.3 812,181 - AZOBR_RS25690 0.24 -0.2 812,181 - AZOBR_RS25690 0.24 +0.2 812,181 - AZOBR_RS25690 0.24 +0.3 812,441 + AZOBR_RS25690 0.61 -1.0 812,442 - AZOBR_RS25690 0.62 +0.1 812,442 - AZOBR_RS25690 0.62 -0.6 812,512 + AZOBR_RS25690 0.72 -0.2 812,512 + AZOBR_RS25690 0.72 +0.0 812,737 - +0.3 812,737 - +0.6
Or see this region's nucleotide sequence