Experiment: benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23490 and AZOBR_RS23495 are separated by 31 nucleotides AZOBR_RS23495 and AZOBR_RS23500 are separated by 219 nucleotides AZOBR_RS23500 and AZOBR_RS23505 overlap by 4 nucleotides
AZOBR_RS23490: AZOBR_RS23490 - hypothetical protein, at 300,268 to 300,843
_RS23490
AZOBR_RS23495: AZOBR_RS23495 - lipoprotein putative (fragment), at 300,875 to 301,486
_RS23495
AZOBR_RS23500: AZOBR_RS23500 - transcriptional regulator IclR family, at 301,706 to 302,494
_RS23500
AZOBR_RS23505: AZOBR_RS23505 - N-formimino-L-glutamate deiminase, at 302,491 to 303,879
_RS23505
Position (kb) 301
302
303 Strain fitness (log2 ratio) -1
0
1 at 300.863 kb on + strand at 300.863 kb on + strand at 300.863 kb on + strand at 300.863 kb on + strand at 300.864 kb on - strand at 300.864 kb on - strand at 300.864 kb on - strand at 301.171 kb on - strand, within AZOBR_RS23495 at 301.300 kb on - strand, within AZOBR_RS23495 at 301.300 kb on - strand, within AZOBR_RS23495 at 301.300 kb on - strand, within AZOBR_RS23495 at 301.581 kb on - strand at 302.007 kb on + strand, within AZOBR_RS23500 at 302.007 kb on + strand, within AZOBR_RS23500 at 302.008 kb on - strand, within AZOBR_RS23500 at 302.008 kb on - strand, within AZOBR_RS23500 at 302.133 kb on + strand, within AZOBR_RS23500 at 302.139 kb on + strand, within AZOBR_RS23500 at 302.140 kb on - strand, within AZOBR_RS23500 at 302.140 kb on - strand, within AZOBR_RS23500 at 302.140 kb on - strand, within AZOBR_RS23500 at 302.140 kb on - strand, within AZOBR_RS23500 at 302.140 kb on - strand, within AZOBR_RS23500 at 302.212 kb on - strand, within AZOBR_RS23500 at 302.212 kb on - strand, within AZOBR_RS23500 at 302.250 kb on + strand, within AZOBR_RS23500 at 302.250 kb on + strand, within AZOBR_RS23500 at 302.251 kb on - strand, within AZOBR_RS23500 at 302.251 kb on - strand, within AZOBR_RS23500 at 302.251 kb on - strand, within AZOBR_RS23500 at 302.251 kb on - strand, within AZOBR_RS23500 at 302.251 kb on - strand, within AZOBR_RS23500 at 302.251 kb on - strand, within AZOBR_RS23500 at 302.319 kb on + strand, within AZOBR_RS23500 at 302.320 kb on - strand, within AZOBR_RS23500 at 302.469 kb on + strand at 302.469 kb on + strand at 302.469 kb on + strand at 302.469 kb on + strand at 302.469 kb on + strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.470 kb on - strand at 302.633 kb on + strand, within AZOBR_RS23505 at 302.633 kb on + strand, within AZOBR_RS23505 at 302.633 kb on + strand, within AZOBR_RS23505 at 302.634 kb on - strand, within AZOBR_RS23505 at 302.634 kb on - strand, within AZOBR_RS23505 at 302.634 kb on - strand at 303.405 kb on - strand, within AZOBR_RS23505 at 303.405 kb on - strand, within AZOBR_RS23505 at 303.405 kb on - strand, within AZOBR_RS23505 at 303.489 kb on - strand, within AZOBR_RS23505 at 303.489 kb on - strand, within AZOBR_RS23505
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.29 mg/ml remove 300,863 + +0.2 300,863 + -0.1 300,863 + +0.3 300,863 + +1.6 300,864 - +0.7 300,864 - -0.0 300,864 - -1.4 301,171 - AZOBR_RS23495 0.48 -0.0 301,300 - AZOBR_RS23495 0.69 -0.4 301,300 - AZOBR_RS23495 0.69 +0.2 301,300 - AZOBR_RS23495 0.69 -0.5 301,581 - +0.4 302,007 + AZOBR_RS23500 0.38 +0.3 302,007 + AZOBR_RS23500 0.38 +1.3 302,008 - AZOBR_RS23500 0.38 +1.0 302,008 - AZOBR_RS23500 0.38 +0.3 302,133 + AZOBR_RS23500 0.54 +1.1 302,139 + AZOBR_RS23500 0.55 +0.6 302,140 - AZOBR_RS23500 0.55 -0.4 302,140 - AZOBR_RS23500 0.55 +0.7 302,140 - AZOBR_RS23500 0.55 +0.8 302,140 - AZOBR_RS23500 0.55 +0.8 302,140 - AZOBR_RS23500 0.55 +0.6 302,212 - AZOBR_RS23500 0.64 +0.3 302,212 - AZOBR_RS23500 0.64 +0.1 302,250 + AZOBR_RS23500 0.69 +0.5 302,250 + AZOBR_RS23500 0.69 +0.9 302,251 - AZOBR_RS23500 0.69 +0.1 302,251 - AZOBR_RS23500 0.69 +0.5 302,251 - AZOBR_RS23500 0.69 +1.2 302,251 - AZOBR_RS23500 0.69 +0.7 302,251 - AZOBR_RS23500 0.69 +1.1 302,251 - AZOBR_RS23500 0.69 +0.2 302,319 + AZOBR_RS23500 0.78 +0.5 302,320 - AZOBR_RS23500 0.78 +0.7 302,469 + +0.7 302,469 + +0.4 302,469 + +1.5 302,469 + +0.8 302,469 + +0.3 302,470 - +0.3 302,470 - +0.7 302,470 - +0.5 302,470 - +0.6 302,470 - +0.6 302,470 - +0.5 302,470 - +0.6 302,470 - +0.7 302,633 + AZOBR_RS23505 0.10 +0.3 302,633 + AZOBR_RS23505 0.10 +0.2 302,633 + AZOBR_RS23505 0.10 +0.8 302,634 - AZOBR_RS23505 0.10 +0.2 302,634 - AZOBR_RS23505 0.10 -0.2 302,634 - +0.5 303,405 - AZOBR_RS23505 0.66 -0.2 303,405 - AZOBR_RS23505 0.66 -0.2 303,405 - AZOBR_RS23505 0.66 -0.2 303,489 - AZOBR_RS23505 0.72 +0.9 303,489 - AZOBR_RS23505 0.72 +0.5
Or see this region's nucleotide sequence