Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001314

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
1,467,458	+				+0.3
1,467,458	+				-1.7
1,467,458	+				-0.6
1,467,458	+				+2.0
1,467,458	+				+1.6
1,467,458	+				+0.2
1,467,459	-				-0.9
1,467,459	-				-0.2
1,467,459	-				-0.2
1,467,459	-				-1.0
1,467,507	+				-0.1
1,467,507	+				+1.1
1,467,507	+				-1.2
1,467,507	+				-1.1
1,467,508	-				-0.3
1,467,508	-				+0.4
1,467,508	-				-1.2
1,467,553	+				-1.1
1,467,554	-				-0.6
1,467,554	-				+0.3
1,467,554	-				-0.5
1,467,609	+				+0.0
1,467,610	-				-1.1
1,467,610	-				-0.3
1,467,610	-				-0.1
1,467,610	-				-0.9
1,467,762	+		ABIE53_001313	0.27	+0.6
1,467,762	+		ABIE53_001313	0.27	-1.5
1,467,763	-		ABIE53_001313	0.27	+2.2
1,467,763	-		ABIE53_001313	0.27	+0.6
1,467,827	+		ABIE53_001313	0.36	+0.5
1,468,071	+		ABIE53_001313	0.68	+0.0
1,468,072	-		ABIE53_001313	0.68	-0.4
1,468,072	-		ABIE53_001313	0.68	-1.7
1,468,142	+		ABIE53_001313	0.78	+1.0
1,468,143	-		ABIE53_001313	0.78	-0.5
1,468,248	+				+2.6
1,468,249	-				-1.6
1,468,249	-				+0.3
1,468,249	-				-0.6
1,468,308	+				-1.5
1,468,378	+				+0.3
1,468,378	+				+0.3
1,468,379	-				-1.1
1,468,434	-				+0.4
1,468,507	-				-1.4
1,468,566	-				-1.8
1,469,066	+		ABIE53_001314	0.20	-1.7
1,469,066	+		ABIE53_001314	0.20	-2.8
1,469,067	-		ABIE53_001314	0.20	+0.0
1,469,067	-		ABIE53_001314	0.20	-1.5
1,469,067	-		ABIE53_001314	0.20	+0.6
1,469,091	-		ABIE53_001314	0.20	-1.8
1,469,105	+		ABIE53_001314	0.21	-1.0
1,469,215	+		ABIE53_001314	0.24	-1.2
1,469,339	+		ABIE53_001314	0.28	-1.5
1,469,339	+		ABIE53_001314	0.28	-2.0
1,469,339	+		ABIE53_001314	0.28	-2.4
1,469,339	+		ABIE53_001314	0.28	-1.2
1,469,340	-		ABIE53_001314	0.28	-2.1
1,469,444	+		ABIE53_001314	0.31	-3.1
1,469,445	-		ABIE53_001314	0.31	-3.0
1,469,496	-		ABIE53_001314	0.33	-3.1
1,469,747	+		ABIE53_001314	0.41	-1.5
1,469,747	+		ABIE53_001314	0.41	-1.5
1,469,747	+		ABIE53_001314	0.41	-1.4
1,469,747	+		ABIE53_001314	0.41	-1.8
1,469,747	+		ABIE53_001314	0.41	-2.8
1,469,747	+		ABIE53_001314	0.41	-1.0
1,469,748	-		ABIE53_001314	0.41	-2.0
1,469,748	-		ABIE53_001314	0.41	+0.6
1,469,748	-		ABIE53_001314	0.41	-0.4
1,469,748	-		ABIE53_001314	0.41	+1.6
1,469,748	-		ABIE53_001314	0.41	-4.2
1,469,834	+		ABIE53_001314	0.43	+1.6
1,469,922	-		ABIE53_001314	0.46	-1.4
1,470,140	+		ABIE53_001314	0.53	-1.2
1,470,141	-		ABIE53_001314	0.53	-2.5
1,470,239	+		ABIE53_001314	0.56	-0.7
1,470,239	+		ABIE53_001314	0.56	-0.4
1,470,239	+		ABIE53_001314	0.56	-1.2
1,470,239	+		ABIE53_001314	0.56	-3.6
1,470,239	+		ABIE53_001314	0.56	-3.5
1,470,239	+		ABIE53_001314	0.56	-1.2
1,470,239	+		ABIE53_001314	0.56	-2.7
1,470,239	+		ABIE53_001314	0.56	+0.0
1,470,239	+		ABIE53_001314	0.56	-1.5
1,470,240	-		ABIE53_001314	0.56	-0.7
1,470,240	-		ABIE53_001314	0.56	-2.2
1,470,240	-		ABIE53_001314	0.56	-1.4
1,470,240	-		ABIE53_001314	0.56	-1.5
1,470,240	-		ABIE53_001314	0.56	+0.0
1,470,370	+		ABIE53_001314	0.60	-2.6
1,470,370	+		ABIE53_001314	0.60	-2.1
1,470,371	-		ABIE53_001314	0.60	-1.8
1,470,371	-		ABIE53_001314	0.60	-1.0
1,470,392	+		ABIE53_001314	0.61	-2.2
1,470,392	+		ABIE53_001314	0.61	-2.3
1,470,392	+		ABIE53_001314	0.61	-1.7
1,470,392	+		ABIE53_001314	0.61	-1.8
1,470,392	+		ABIE53_001314	0.61	-2.5
1,470,393	-		ABIE53_001314	0.61	-2.2
1,470,393	-		ABIE53_001314	0.61	-1.0
1,470,393	-		ABIE53_001314	0.61	-3.5
1,470,393	-		ABIE53_001314	0.61	-2.6
1,470,393	-		ABIE53_001314	0.61	-2.6
1,470,489	+		ABIE53_001314	0.64	-1.2
1,470,489	+		ABIE53_001314	0.64	-0.7
1,470,489	+		ABIE53_001314	0.64	-2.3
1,470,489	+		ABIE53_001314	0.64	-3.6
1,470,490	-		ABIE53_001314	0.64	-2.0
1,470,596	+		ABIE53_001314	0.67	-2.4
1,470,596	+		ABIE53_001314	0.67	-1.4
1,470,597	-		ABIE53_001314	0.67	-4.6
1,470,600	-		ABIE53_001314	0.67	-1.7
1,470,600	-		ABIE53_001314	0.67	-2.3
1,470,902	+		ABIE53_001314	0.77	-2.0
1,470,903	-		ABIE53_001314	0.77	-2.6
1,470,903	-		ABIE53_001314	0.77	-1.5
1,470,903	-		ABIE53_001314	0.77	-1.0
1,470,903	-		ABIE53_001314	0.77	-1.1
1,470,948	+		ABIE53_001314	0.78	-1.5
1,470,948	+		ABIE53_001314	0.78	-2.4
1,470,949	-		ABIE53_001314	0.78	+0.4
1,470,949	-		ABIE53_001314	0.78	-4.3
1,470,949	-		ABIE53_001314	0.78	-3.1
1,470,949	-		ABIE53_001314	0.78	+0.0
1,471,004	+		ABIE53_001314	0.80	-0.7
1,471,004	+		ABIE53_001314	0.80	-2.1
1,471,004	+		ABIE53_001314	0.80	-2.0
1,471,004	+		ABIE53_001314	0.80	-0.7
1,471,004	+		ABIE53_001314	0.80	-3.9
1,471,005	-		ABIE53_001314	0.80	-2.0
1,471,005	-		ABIE53_001314	0.80	-1.7
1,471,005	-		ABIE53_001314	0.80	-1.3
1,471,005	-		ABIE53_001314	0.80	-3.1
1,471,005	-		ABIE53_001314	0.80	-1.5
1,471,005	-		ABIE53_001314	0.80	-1.4
1,471,196	+		ABIE53_001314	0.86	-3.4
1,471,691	+				-2.7
1,471,691	+				+0.6
1,471,707	-				-1.5
1,471,758	+				+0.6
1,471,759	-				-0.2
1,471,813	-				-1.7
1,471,927	+				-1.2
1,472,021	-				-0.1
1,472,021	-				+0.0
1,472,087	+				+0.1
1,472,087	+				-1.6
1,472,100	+				-0.3
1,472,100	+				+0.6
1,472,100	+				-1.2
1,472,100	+				+1.4
1,472,100	+				+0.0
1,472,129	+				+0.4
1,472,129	+				-0.7