Strain Fitness in Rahnella sp. WP5 around EX31_RS15000

Experiment: L-Serine (N); ShewMM media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); ShewMM media; shaking
11,460	+		EX31_RS14990	0.63	-2.0
11,460	+		EX31_RS14990	0.63	-0.9
11,461	-		EX31_RS14990	0.63	-1.5
11,484	+		EX31_RS14990	0.64	-0.3
11,484	+		EX31_RS14990	0.64	-0.6
11,485	-		EX31_RS14990	0.64	-3.2
11,497	+		EX31_RS14990	0.65	-0.7
11,497	+		EX31_RS14990	0.65	-0.5
11,497	+		EX31_RS14990	0.65	-0.6
11,498	-		EX31_RS14990	0.65	-2.1
11,519	+		EX31_RS14990	0.66	-2.0
11,519	+		EX31_RS14990	0.66	-0.5
11,520	-		EX31_RS14990	0.66	-2.0
11,520	-		EX31_RS14990	0.66	-3.4
11,582	+		EX31_RS14990	0.70	-1.7
11,582	+		EX31_RS14990	0.70	-1.5
11,582	+		EX31_RS14990	0.70	-1.6
11,582	+		EX31_RS14990	0.70	-0.0
11,582	+		EX31_RS14990	0.70	-1.6
11,582	+		EX31_RS14990	0.70	-0.9
11,582	+		EX31_RS14990	0.70	-2.0
11,582	+		EX31_RS14990	0.70	-1.8
11,582	+		EX31_RS14990	0.70	-2.8
11,582	+		EX31_RS14990	0.70	-1.2
11,582	+		EX31_RS14990	0.70	-1.6
11,582	+		EX31_RS14990	0.70	-0.8
11,582	+		EX31_RS14990	0.70	-0.7
11,582	+		EX31_RS14990	0.70	-2.6
11,582	+		EX31_RS14990	0.70	-1.1
11,582	+		EX31_RS14990	0.70	-0.4
11,582	+		EX31_RS14990	0.70	-3.5
11,582	+		EX31_RS14990	0.70	-3.0
11,582	+		EX31_RS14990	0.70	-0.6
11,582	+		EX31_RS14990	0.70	+0.1
11,582	+		EX31_RS14990	0.70	-0.9
11,583	-		EX31_RS14990	0.70	-2.2
11,583	-		EX31_RS14990	0.70	-1.3
11,583	-		EX31_RS14990	0.70	-1.2
11,583	-		EX31_RS14990	0.70	-3.3
11,583	-		EX31_RS14990	0.70	-3.6
11,583	-		EX31_RS14990	0.70	-1.5
11,583	-		EX31_RS14990	0.70	-4.4
11,583	-		EX31_RS14990	0.70	-2.1
11,583	-		EX31_RS14990	0.70	-2.3
11,583	-		EX31_RS14990	0.70	-1.2
11,583	-		EX31_RS14990	0.70	-1.6
11,687	+		EX31_RS14990	0.76	-2.0
11,688	-		EX31_RS14990	0.77	-1.7
11,688	-		EX31_RS14990	0.77	-2.2
11,688	-		EX31_RS14990	0.77	-3.0
11,918	+				-0.8
11,918	+				+0.1
11,918	+				-0.7
11,918	+				-1.1
11,918	+				-1.7
11,919	-				-2.5
11,919	-				-1.6
11,979	+				-1.5
11,979	+				-0.2
11,979	+				-0.9
11,979	+				-0.9
12,082	+				-0.1
12,082	+				-1.1
12,082	+				-0.4
12,082	+				-1.6
12,082	+				-0.6
12,082	+				+0.6
12,082	+				-1.5
12,082	+				-1.4
12,082	+				+0.9
12,082	+				-0.0
12,082	+				+0.9
12,082	+				-0.3
12,082	+				-1.1
12,082	+				-0.5
12,082	+				-1.6
12,083	-				-1.3
12,083	-				-2.1
12,083	-				-2.6
12,083	-				-2.9
12,083	-				-1.3
12,083	-				-3.3
12,083	-				-2.6
12,083	-				-1.6
12,083	-				-0.5
12,083	-				+0.1
12,129	+		EX31_RS14995	0.22	-1.2
12,130	-		EX31_RS14995	0.22	-1.4
12,132	+		EX31_RS14995	0.23	+0.1
12,133	-		EX31_RS14995	0.23	-0.7
12,204	+		EX31_RS14995	0.50	-0.7
12,204	+		EX31_RS14995	0.50	-0.6
12,204	+		EX31_RS14995	0.50	-0.1
12,204	+		EX31_RS14995	0.50	+0.6
12,204	+		EX31_RS14995	0.50	+0.9
12,204	+		EX31_RS14995	0.50	-1.2
12,204	+		EX31_RS14995	0.50	+1.2
12,205	-		EX31_RS14995	0.51	-2.4
12,205	-		EX31_RS14995	0.51	-2.3
12,209	-		EX31_RS14995	0.52	-2.5
12,209	-		EX31_RS14995	0.52	-2.6
12,209	-		EX31_RS14995	0.52	-1.5
12,209	-		EX31_RS14995	0.52	-1.8
12,240	+		EX31_RS14995	0.64	-0.7
12,240	+		EX31_RS14995	0.64	-1.0
12,246	+		EX31_RS14995	0.66	-1.8
12,246	+		EX31_RS14995	0.66	+0.1
12,246	+		EX31_RS14995	0.66	-2.9
12,247	-		EX31_RS14995	0.67	-0.8
12,247	-		EX31_RS14995	0.67	-2.5
12,247	-		EX31_RS14995	0.67	-2.7
12,261	+		EX31_RS14995	0.72	-0.9
12,261	+		EX31_RS14995	0.72	-0.9
12,261	+		EX31_RS14995	0.72	+0.8
12,271	+		EX31_RS14995	0.76	-1.0
12,271	+		EX31_RS14995	0.76	+0.9
12,271	+		EX31_RS14995	0.76	-0.5
12,271	+		EX31_RS14995	0.76	-2.6
12,271	+		EX31_RS14995	0.76	-2.6
12,272	-		EX31_RS14995	0.76	-3.2
12,272	-		EX31_RS14995	0.76	-1.3
12,272	-		EX31_RS14995	0.76	-1.4
12,272	-		EX31_RS14995	0.76	-2.0
12,304	+		EX31_RS14995	0.88	-0.2
12,304	+		EX31_RS14995	0.88	-0.6
12,304	+		EX31_RS14995	0.88	+0.2
12,304	+		EX31_RS14995	0.88	+0.3
12,304	+		EX31_RS14995	0.88	-0.5
12,304	+		EX31_RS14995	0.88	+0.9
12,304	+		EX31_RS14995	0.88	+0.4
12,304	+		EX31_RS14995	0.88	+0.5
12,304	+		EX31_RS14995	0.88	+0.1
12,304	+		EX31_RS14995	0.88	+0.4
12,304	+		EX31_RS14995	0.88	+0.2
12,304	+		EX31_RS14995	0.88	-0.3
12,304	+		EX31_RS14995	0.88	-0.4
12,304	+		EX31_RS14995	0.88	+0.7
12,304	+		EX31_RS14995	0.88	-0.0
12,304	+		EX31_RS14995	0.88	-0.4
12,304	+		EX31_RS14995	0.88	+0.0
12,304	+		EX31_RS14995	0.88	-0.6
12,304	+		EX31_RS14995	0.88	-1.6
12,304	+		EX31_RS14995	0.88	+0.4
12,304	+		EX31_RS14995	0.88	+0.1
12,304	+		EX31_RS14995	0.88	-0.8
12,304	+		EX31_RS14995	0.88	+0.3
12,304	+		EX31_RS14995	0.88	-0.4
12,304	+		EX31_RS14995	0.88	+0.1
12,304	+		EX31_RS14995	0.88	+0.1
12,304	+		EX31_RS14995	0.88	+1.1
12,304	+		EX31_RS14995	0.88	-0.0
12,304	+		EX31_RS14995	0.88	-0.1
12,304	+		EX31_RS14995	0.88	+0.3
12,304	+		EX31_RS14995	0.88	+0.2
12,304	+		EX31_RS14995	0.88	-0.2
12,304	+		EX31_RS14995	0.88	-1.2
12,304	+		EX31_RS14995	0.88	+0.4
12,304	+		EX31_RS14995	0.88	+0.1
12,304	+		EX31_RS14995	0.88	+0.9
12,304	+		EX31_RS14995	0.88	+0.6
12,304	+		EX31_RS14995	0.88	-0.3
12,304	+		EX31_RS14995	0.88	-0.3
12,305	-		EX31_RS14995	0.89	-3.1
12,305	-		EX31_RS14995	0.89	-2.1
12,305	-		EX31_RS14995	0.89	-3.3
12,305	-		EX31_RS14995	0.89	-2.0
12,305	-		EX31_RS14995	0.89	-1.8
12,305	-		EX31_RS14995	0.89	-0.5
12,305	-		EX31_RS14995	0.89	-1.2
12,305	-		EX31_RS14995	0.89	-3.4
12,305	-		EX31_RS14995	0.89	-2.3
12,305	-		EX31_RS14995	0.89	-1.9
12,305	-		EX31_RS14995	0.89	-0.9
12,305	-		EX31_RS14995	0.89	-4.2
12,305	-		EX31_RS14995	0.89	-3.1
12,305	-		EX31_RS14995	0.89	-2.9
12,305	-		EX31_RS14995	0.89	-0.7
12,305	-		EX31_RS14995	0.89	-2.5
12,305	-		EX31_RS14995	0.89	-2.5
12,305	-		EX31_RS14995	0.89	-1.4
12,305	-		EX31_RS14995	0.89	-2.9
12,305	-		EX31_RS14995	0.89	-2.9
12,305	-		EX31_RS14995	0.89	-1.1
12,305	-		EX31_RS14995	0.89	-2.3
12,305	-		EX31_RS14995	0.89	-2.2
12,305	-		EX31_RS14995	0.89	-2.5
12,305	-		EX31_RS14995	0.89	-3.9
12,305	-		EX31_RS14995	0.89	-2.2
12,305	-		EX31_RS14995	0.89	-1.4
12,305	-		EX31_RS14995	0.89	-1.0
12,305	-		EX31_RS14995	0.89	-3.0
12,305	-		EX31_RS14995	0.89	-2.9
12,305	-		EX31_RS14995	0.89	-0.7
12,305	-		EX31_RS14995	0.89	-2.6
12,305	-		EX31_RS14995	0.89	-2.6
12,305	-		EX31_RS14995	0.89	-2.7
12,305	-		EX31_RS14995	0.89	-1.9
12,318	+				-0.3
12,319	-				-2.8
12,337	-				-3.9
12,369	+				-0.4
12,369	+				-2.5
12,369	+				-1.8
12,369	+				-2.6
12,369	+				-0.7
12,369	+				-1.0
12,370	-				-2.9
12,370	-				-0.7
12,370	-				-2.1
12,370	-				-3.3
12,411	-				-1.9
12,411	-				-1.4
12,411	-				-3.6
12,411	-				-2.8
12,411	-				-0.7
12,442	-				-1.8
12,474	+		EX31_RS15000	0.13	-0.5
12,474	+		EX31_RS15000	0.13	-0.7
12,474	+		EX31_RS15000	0.13	-0.3
12,475	-		EX31_RS15000	0.13	-3.7
12,475	-		EX31_RS15000	0.13	-2.2
12,499	+		EX31_RS15000	0.16	-0.6
12,518	+		EX31_RS15000	0.18	-2.0
12,518	+		EX31_RS15000	0.18	-2.3
12,518	+		EX31_RS15000	0.18	-1.4
12,518	+		EX31_RS15000	0.18	-1.2
12,518	+		EX31_RS15000	0.18	-0.4
12,518	+		EX31_RS15000	0.18	-1.4
12,518	+		EX31_RS15000	0.18	-1.2
12,518	+		EX31_RS15000	0.18	-1.4
12,518	+		EX31_RS15000	0.18	-0.7
12,518	+		EX31_RS15000	0.18	-1.0
12,518	+		EX31_RS15000	0.18	-2.0
12,518	+		EX31_RS15000	0.18	-0.6
12,518	+		EX31_RS15000	0.18	-0.2
12,518	+		EX31_RS15000	0.18	+0.3
12,518	+		EX31_RS15000	0.18	-1.0
12,519	-		EX31_RS15000	0.18	-1.6
12,519	-		EX31_RS15000	0.18	-2.2
12,519	-		EX31_RS15000	0.18	-1.8
12,519	-		EX31_RS15000	0.18	-3.1
12,519	-		EX31_RS15000	0.18	-1.8
12,519	-		EX31_RS15000	0.18	-3.5
12,519	-		EX31_RS15000	0.18	-2.8
12,519	-		EX31_RS15000	0.18	-1.2
12,519	-		EX31_RS15000	0.18	-2.3
12,519	-		EX31_RS15000	0.18	-2.9
12,519	-		EX31_RS15000	0.18	-2.4
12,519	-		EX31_RS15000	0.18	-2.2
12,519	-		EX31_RS15000	0.18	-2.4
12,519	-		EX31_RS15000	0.18	-3.4
12,519	-		EX31_RS15000	0.18	-2.8
12,519	-		EX31_RS15000	0.18	-3.0
12,519	-		EX31_RS15000	0.18	-2.3
12,519	-		EX31_RS15000	0.18	-2.4
12,554	+		EX31_RS15000	0.22	-2.1
12,554	+		EX31_RS15000	0.22	-2.4
12,554	+		EX31_RS15000	0.22	-1.0
12,554	+		EX31_RS15000	0.22	+0.5
12,554	+		EX31_RS15000	0.22	-1.6
12,554	+		EX31_RS15000	0.22	-1.1
12,554	+		EX31_RS15000	0.22	+0.1
12,554	+		EX31_RS15000	0.22	-2.2
12,554	+		EX31_RS15000	0.22	-0.4
12,554	+		EX31_RS15000	0.22	-1.8
12,555	-		EX31_RS15000	0.22	-1.1
12,555	-		EX31_RS15000	0.22	+0.6
12,555	-		EX31_RS15000	0.22	-2.8
12,611	+		EX31_RS15000	0.28	-1.1
12,612	-		EX31_RS15000	0.28	-1.8
12,633	+		EX31_RS15000	0.30	-1.5
12,633	+		EX31_RS15000	0.30	+0.6
12,633	+		EX31_RS15000	0.30	-0.6
12,633	+		EX31_RS15000	0.30	-1.1
12,633	+		EX31_RS15000	0.30	-0.7
12,633	+		EX31_RS15000	0.30	-1.3
12,633	+		EX31_RS15000	0.30	-1.0
12,633	+		EX31_RS15000	0.30	-1.7
12,633	+		EX31_RS15000	0.30	-0.2
12,633	+		EX31_RS15000	0.30	-1.2
12,633	+		EX31_RS15000	0.30	-0.5
12,633	+		EX31_RS15000	0.30	-0.1
12,633	+		EX31_RS15000	0.30	-0.4
12,633	+		EX31_RS15000	0.30	+0.3
12,633	+		EX31_RS15000	0.30	-0.6
12,634	-		EX31_RS15000	0.30	-2.2
12,634	-		EX31_RS15000	0.30	-2.0
12,634	-		EX31_RS15000	0.30	-2.8
12,634	-		EX31_RS15000	0.30	-2.0
12,634	-		EX31_RS15000	0.30	-2.6
12,634	-		EX31_RS15000	0.30	-2.6
12,634	-		EX31_RS15000	0.30	-0.8
12,634	-		EX31_RS15000	0.30	-3.5
12,634	-		EX31_RS15000	0.30	-2.0
12,634	-		EX31_RS15000	0.30	-1.6
12,634	-		EX31_RS15000	0.30	-2.2
12,635	+		EX31_RS15000	0.31	-1.2
12,635	+		EX31_RS15000	0.31	-1.2
12,636	-		EX31_RS15000	0.31	+0.6
12,669	-		EX31_RS15000	0.34	-2.1
12,677	+		EX31_RS15000	0.35	-0.6
12,735	+		EX31_RS15000	0.41	-1.1
12,736	-		EX31_RS15000	0.41	-3.3
12,836	+		EX31_RS15000	0.52	-1.2
12,836	+		EX31_RS15000	0.52	-1.5
12,836	+		EX31_RS15000	0.52	-2.0
12,837	-		EX31_RS15000	0.52	+0.5
12,837	-		EX31_RS15000	0.52	-2.0
12,837	-		EX31_RS15000	0.52	-3.7
12,840	+		EX31_RS15000	0.53	-2.0
12,840	+		EX31_RS15000	0.53	-1.4
12,840	+		EX31_RS15000	0.53	-0.1
12,840	+		EX31_RS15000	0.53	-1.0
12,840	+		EX31_RS15000	0.53	-1.1
12,840	+		EX31_RS15000	0.53	-0.3
12,840	+		EX31_RS15000	0.53	+0.3
12,840	+		EX31_RS15000	0.53	-1.8
12,840	+		EX31_RS15000	0.53	-1.3
12,840	+		EX31_RS15000	0.53	-0.0
12,840	+		EX31_RS15000	0.53	-0.3
12,841	-		EX31_RS15000	0.53	-2.6
12,841	-		EX31_RS15000	0.53	-1.4
12,841	-		EX31_RS15000	0.53	-0.9
12,841	-		EX31_RS15000	0.53	-3.4
12,841	-		EX31_RS15000	0.53	-1.5
12,841	-		EX31_RS15000	0.53	+0.6
12,841	-		EX31_RS15000	0.53	-1.4
12,841	-		EX31_RS15000	0.53	-1.9
12,841	-		EX31_RS15000	0.53	-3.6
12,841	-		EX31_RS15000	0.53	-1.4
12,918	+		EX31_RS15000	0.61	-1.5
12,919	-		EX31_RS15000	0.61	-0.9
12,986	+		EX31_RS15000	0.68	+0.0
12,986	+		EX31_RS15000	0.68	-1.1
12,986	+		EX31_RS15000	0.68	+0.4
12,987	-		EX31_RS15000	0.68	-2.4
12,987	-		EX31_RS15000	0.68	-3.3
12,987	-		EX31_RS15000	0.68	-2.0
13,007	+		EX31_RS15000	0.71	-0.5
13,008	-		EX31_RS15000	0.71	-2.4
13,022	+		EX31_RS15000	0.72	-0.5
13,022	+		EX31_RS15000	0.72	-0.5
13,023	-		EX31_RS15000	0.72	-3.1
13,025	+		EX31_RS15000	0.72	-0.7
13,026	-		EX31_RS15000	0.73	-3.0
13,026	-		EX31_RS15000	0.73	-1.1
13,028	+		EX31_RS15000	0.73	-1.6
13,028	+		EX31_RS15000	0.73	-1.0
13,029	-		EX31_RS15000	0.73	-1.4
13,029	-		EX31_RS15000	0.73	-1.6
13,089	+		EX31_RS15000	0.79	+0.2
13,089	+		EX31_RS15000	0.79	-0.7
13,090	-		EX31_RS15000	0.79	-3.5
13,244	+				+0.1
13,244	+				+0.8
13,244	+				-1.4
13,244	+				-0.4
13,244	+				+1.1
13,244	+				+1.3
13,244	+				-0.1
13,245	-				-1.4
13,245	-				-3.4
13,245	-				-2.1
13,278	+				+0.2
13,278	+				-0.4
13,279	-				-2.4
13,279	-				-2.9
13,346	+				-0.4
13,347	-				-0.8
13,350	+				+1.1
13,350	+				-1.0
13,351	-				-3.2
13,351	-				-1.6
13,351	-				-1.5
13,366	+				+0.9
13,386	-				-4.1
13,420	+				-3.6
13,420	+				-0.9
13,420	+				-1.2
13,420	+				-0.9
13,420	+				-2.4
13,420	+				-2.6
13,420	+				-1.5
13,420	+				-1.6
13,420	+				-1.3
13,420	+				-3.8
13,420	+				-3.7
13,421	-				-1.6
13,421	-				-2.6
13,421	-				-1.9
13,421	-				-3.0
13,421	-				-1.8
13,421	-				-3.2
13,421	-				+0.3
13,421	-				-1.8
13,421	-				-2.3
13,421	-				-3.3
13,421	-				-1.2
13,424	+				-2.0
13,424	+				-2.1
13,476	+				-1.8
13,523	-				-2.1
13,643	-		EX31_RS15005	0.12	-2.8
13,643	-		EX31_RS15005	0.12	-0.7
13,643	-		EX31_RS15005	0.12	-2.7
13,688	+		EX31_RS15005	0.15	-4.4
13,688	+		EX31_RS15005	0.15	-1.9
13,688	+		EX31_RS15005	0.15	-1.1
13,688	+		EX31_RS15005	0.15	-2.8
13,689	-		EX31_RS15005	0.15	-2.2
13,689	-		EX31_RS15005	0.15	-3.7
13,730	+		EX31_RS15005	0.17	-2.6
13,730	+		EX31_RS15005	0.17	+1.3
13,730	+		EX31_RS15005	0.17	-4.8
13,730	+		EX31_RS15005	0.17	-2.2
13,730	+		EX31_RS15005	0.17	-1.0
13,730	+		EX31_RS15005	0.17	-2.7
13,730	+		EX31_RS15005	0.17	-1.9
13,731	-		EX31_RS15005	0.17	-0.8
13,731	-		EX31_RS15005	0.17	-1.8
13,731	-		EX31_RS15005	0.17	-1.3
13,731	-		EX31_RS15005	0.17	-3.1
13,731	-		EX31_RS15005	0.17	-3.2
13,768	+		EX31_RS15005	0.19	-2.7
13,768	+		EX31_RS15005	0.19	-1.5
13,768	+		EX31_RS15005	0.19	-2.8
13,769	-		EX31_RS15005	0.19	-1.8
13,769	-		EX31_RS15005	0.19	-1.6
13,825	+		EX31_RS15005	0.22	-1.6
13,825	+		EX31_RS15005	0.22	-2.7
14,005	+		EX31_RS15005	0.32	-3.0
14,006	-		EX31_RS15005	0.32	-2.4
14,006	-		EX31_RS15005	0.32	-3.7
14,012	-		EX31_RS15005	0.32	-2.1
14,083	+		EX31_RS15005	0.36	-2.1
14,113	+		EX31_RS15005	0.38	-2.2
14,151	-		EX31_RS15005	0.40	-2.3
14,151	-		EX31_RS15005	0.40	-3.8
14,225	+		EX31_RS15005	0.44	-3.6
14,251	+		EX31_RS15005	0.45	-2.9