Experiment: L-Serine (N); ShewMM media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS02460 and EX31_RS02465 overlap by 10 nucleotides EX31_RS02465 and EX31_RS02470 overlap by 1 nucleotides EX31_RS02470 and EX31_RS02475 overlap by 17 nucleotides
EX31_RS02460: EX31_RS02460 - acyl-CoA dehydrogenase, at 522,361 to 523,509
_RS02460
EX31_RS02465: EX31_RS02465 - hypothetical protein, at 523,500 to 524,006
_RS02465
EX31_RS02470: EX31_RS02470 - alpha/beta fold hydrolase, at 524,006 to 524,827
_RS02470
EX31_RS02475: EX31_RS02475 - 3-oxoacyl-ACP synthase, at 524,811 to 525,797
_RS02475
Position (kb) 523
524
525 Strain fitness (log2 ratio) -2
-1
0
1
2 at 522.508 kb on - strand, within EX31_RS02460 at 522.532 kb on + strand, within EX31_RS02460 at 522.533 kb on - strand, within EX31_RS02460 at 522.599 kb on - strand, within EX31_RS02460 at 522.615 kb on + strand, within EX31_RS02460 at 522.616 kb on - strand, within EX31_RS02460 at 522.731 kb on + strand, within EX31_RS02460 at 522.731 kb on + strand, within EX31_RS02460 at 522.731 kb on + strand, within EX31_RS02460 at 522.732 kb on - strand, within EX31_RS02460 at 522.881 kb on + strand, within EX31_RS02460 at 522.881 kb on + strand, within EX31_RS02460 at 522.881 kb on + strand, within EX31_RS02460 at 522.882 kb on - strand, within EX31_RS02460 at 522.915 kb on + strand, within EX31_RS02460 at 522.916 kb on - strand, within EX31_RS02460 at 522.916 kb on - strand, within EX31_RS02460 at 522.990 kb on + strand, within EX31_RS02460 at 523.023 kb on + strand, within EX31_RS02460 at 523.237 kb on + strand, within EX31_RS02460 at 523.238 kb on - strand, within EX31_RS02460 at 523.275 kb on + strand, within EX31_RS02460 at 523.377 kb on + strand, within EX31_RS02460 at 523.377 kb on + strand, within EX31_RS02460 at 523.388 kb on + strand, within EX31_RS02460 at 523.398 kb on - strand at 523.679 kb on + strand, within EX31_RS02465 at 523.680 kb on - strand, within EX31_RS02465 at 523.780 kb on + strand, within EX31_RS02465 at 523.863 kb on + strand, within EX31_RS02465 at 523.864 kb on - strand, within EX31_RS02465 at 523.972 kb on - strand at 524.005 kb on - strand at 524.011 kb on + strand at 524.011 kb on + strand at 524.012 kb on - strand at 524.035 kb on + strand at 524.035 kb on + strand at 524.035 kb on + strand at 524.035 kb on + strand at 524.035 kb on + strand at 524.036 kb on - strand at 524.187 kb on + strand, within EX31_RS02470 at 524.252 kb on + strand, within EX31_RS02470 at 524.253 kb on - strand, within EX31_RS02470 at 524.261 kb on + strand, within EX31_RS02470 at 524.331 kb on + strand, within EX31_RS02470 at 524.350 kb on + strand, within EX31_RS02470 at 524.350 kb on + strand, within EX31_RS02470 at 524.351 kb on - strand, within EX31_RS02470 at 524.351 kb on - strand, within EX31_RS02470 at 524.489 kb on + strand, within EX31_RS02470 at 524.519 kb on + strand, within EX31_RS02470 at 524.671 kb on - strand, within EX31_RS02470 at 524.707 kb on - strand, within EX31_RS02470 at 524.753 kb on + strand at 524.811 kb on - strand at 524.811 kb on - strand at 524.841 kb on + strand at 524.841 kb on + strand at 524.842 kb on - strand at 524.842 kb on - strand at 524.929 kb on - strand, within EX31_RS02475 at 524.989 kb on + strand, within EX31_RS02475
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); ShewMM media; shaking remove 522,508 - EX31_RS02460 0.13 +1.2 522,532 + EX31_RS02460 0.15 -0.0 522,533 - EX31_RS02460 0.15 +0.9 522,599 - EX31_RS02460 0.21 +0.2 522,615 + EX31_RS02460 0.22 +1.8 522,616 - EX31_RS02460 0.22 +0.1 522,731 + EX31_RS02460 0.32 +0.2 522,731 + EX31_RS02460 0.32 +0.5 522,731 + EX31_RS02460 0.32 -0.7 522,732 - EX31_RS02460 0.32 +1.0 522,881 + EX31_RS02460 0.45 -0.5 522,881 + EX31_RS02460 0.45 +0.7 522,881 + EX31_RS02460 0.45 +2.4 522,882 - EX31_RS02460 0.45 +2.0 522,915 + EX31_RS02460 0.48 +1.4 522,916 - EX31_RS02460 0.48 +0.4 522,916 - EX31_RS02460 0.48 -1.1 522,990 + EX31_RS02460 0.55 -0.3 523,023 + EX31_RS02460 0.58 +0.4 523,237 + EX31_RS02460 0.76 -0.9 523,238 - EX31_RS02460 0.76 -0.1 523,275 + EX31_RS02460 0.80 -0.2 523,377 + EX31_RS02460 0.88 -0.3 523,377 + EX31_RS02460 0.88 +0.7 523,388 + EX31_RS02460 0.89 +0.0 523,398 - +0.6 523,679 + EX31_RS02465 0.35 -1.7 523,680 - EX31_RS02465 0.36 -0.4 523,780 + EX31_RS02465 0.55 -0.4 523,863 + EX31_RS02465 0.72 +1.0 523,864 - EX31_RS02465 0.72 -0.9 523,972 - -0.2 524,005 - -1.4 524,011 + -0.6 524,011 + -0.7 524,012 - -1.0 524,035 + +1.4 524,035 + +0.9 524,035 + +2.3 524,035 + +0.4 524,035 + -0.7 524,036 - +0.8 524,187 + EX31_RS02470 0.22 -1.7 524,252 + EX31_RS02470 0.30 -1.2 524,253 - EX31_RS02470 0.30 +0.2 524,261 + EX31_RS02470 0.31 +2.0 524,331 + EX31_RS02470 0.40 -0.4 524,350 + EX31_RS02470 0.42 -0.2 524,350 + EX31_RS02470 0.42 +2.0 524,351 - EX31_RS02470 0.42 -1.8 524,351 - EX31_RS02470 0.42 -0.4 524,489 + EX31_RS02470 0.59 -0.7 524,519 + EX31_RS02470 0.62 -0.8 524,671 - EX31_RS02470 0.81 -0.4 524,707 - EX31_RS02470 0.85 -1.6 524,753 + -0.4 524,811 - -2.1 524,811 - -0.2 524,841 + -0.1 524,841 + +1.7 524,842 - +0.7 524,842 - +1.6 524,929 - EX31_RS02475 0.12 +0.0 524,989 + EX31_RS02475 0.18 -0.4
Or see this region's nucleotide sequence