Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2784

Experiment: Sisomicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.0005 mg/ml
1,087,875	+				-0.5
1,087,875	+				-0.6
1,087,875	+				+0.6
1,087,902	+				-1.0
1,087,902	+				-0.4
1,087,902	+				+1.5
1,087,902	+				+1.5
1,087,902	+				+0.5
1,087,902	+				-0.5
1,087,902	+				-0.4
1,087,903	-				+0.9
1,087,903	-				+0.4
1,087,903	-				+0.3
1,087,903	-				-1.1
1,087,908	+				+0.1
1,087,908	+				+0.2
1,087,908	+				-0.4
1,087,908	+				+0.2
1,087,909	-				-0.2
1,087,909	-				+0.6
1,087,909	-				-1.1
1,087,909	-				-0.3
1,088,009	+		Ac3H11_2783	0.22	+2.3
1,088,009	+		Ac3H11_2783	0.22	-1.2
1,088,009	+		Ac3H11_2783	0.22	+0.7
1,088,009	+		Ac3H11_2783	0.22	+0.7
1,088,010	-		Ac3H11_2783	0.22	-2.3
1,088,067	+		Ac3H11_2783	0.29	-0.1
1,088,067	+		Ac3H11_2783	0.29	+0.3
1,088,112	+		Ac3H11_2783	0.35	+0.0
1,088,112	+		Ac3H11_2783	0.35	+1.2
1,088,112	+		Ac3H11_2783	0.35	-0.7
1,088,112	+		Ac3H11_2783	0.35	+0.7
1,088,113	-		Ac3H11_2783	0.35	-0.8
1,088,400	+		Ac3H11_2783	0.70	+0.2
1,088,401	-		Ac3H11_2783	0.70	+0.2
1,088,491	+		Ac3H11_2783	0.81	+0.4
1,088,491	+		Ac3H11_2783	0.81	-0.0
1,088,715	+				-0.1
1,088,747	-				+0.2
1,088,782	+				-0.9
1,088,782	+				-0.2
1,088,783	-				-1.0
1,088,867	+		Ac3H11_2784	0.12	+0.2
1,088,868	-		Ac3H11_2784	0.12	-0.2
1,088,868	-		Ac3H11_2784	0.12	+1.2
1,089,142	-		Ac3H11_2784	0.42	+1.4
1,089,474	+		Ac3H11_2784	0.78	-0.2
1,089,474	+		Ac3H11_2784	0.78	+0.6
1,089,474	+		Ac3H11_2784	0.78	-0.3
1,089,474	+		Ac3H11_2784	0.78	+0.8
1,089,474	+		Ac3H11_2784	0.78	+1.3
1,089,474	+		Ac3H11_2784	0.78	+0.2
1,089,475	-		Ac3H11_2784	0.79	+0.1
1,089,475	-		Ac3H11_2784	0.79	+0.6
1,089,475	-		Ac3H11_2784	0.79	-0.7
1,089,475	-		Ac3H11_2784	0.79	+0.4
1,089,563	+		Ac3H11_2784	0.88	+1.0
1,089,668	-				-1.4
1,089,704	+				-1.0
1,089,752	-				-0.6
1,089,805	-				-0.3
1,089,850	+				+1.2
1,089,850	+				-1.2
1,089,988	+				-0.9
1,089,988	+				-1.8
1,089,988	+				+1.0
1,089,989	-				+0.3
1,089,989	-				+1.1
1,089,989	-				+0.1
1,090,035	-				-0.2
1,090,140	+				-0.1
1,090,141	-				+0.7
1,090,191	+		Ac3H11_2785	0.18	+0.4
1,090,251	+		Ac3H11_2785	0.30	+0.2
1,090,251	+		Ac3H11_2785	0.30	-0.4
1,090,251	+		Ac3H11_2785	0.30	+1.1
1,090,252	-		Ac3H11_2785	0.30	-0.0
1,090,252	-		Ac3H11_2785	0.30	+0.0
1,090,580	+				-1.1
1,090,581	-				+0.2
1,090,624	-				+0.2
1,090,632	+				-0.6
1,090,632	+				+0.6
1,090,632	+				+1.5
1,090,632	+				+0.6
1,090,633	-				+0.2