Experiment: benzoic 0.145 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30625 and AZOBR_RS30630 are separated by 133 nucleotides AZOBR_RS30630 and AZOBR_RS30635 are separated by 111 nucleotides AZOBR_RS30635 and AZOBR_RS30640 overlap by 38 nucleotides
AZOBR_RS30625: AZOBR_RS30625 - MFS transporter, at 226,798 to 228,033
_RS30625
AZOBR_RS30630: AZOBR_RS30630 - transcriptional regulator, at 228,167 to 229,102
_RS30630
AZOBR_RS30635: AZOBR_RS30635 - phosphohydrolase, at 229,214 to 229,675
_RS30635
AZOBR_RS30640: AZOBR_RS30640 - hypothetical protein, at 229,638 to 230,405
_RS30640
Position (kb) 228
229
230 Strain fitness (log2 ratio) -1
0
1 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.295 kb on - strand, within AZOBR_RS30625 at 227.366 kb on + strand, within AZOBR_RS30625 at 227.366 kb on + strand, within AZOBR_RS30625 at 227.367 kb on - strand, within AZOBR_RS30625 at 227.367 kb on - strand, within AZOBR_RS30625 at 228.122 kb on + strand at 229.162 kb on - strand at 229.162 kb on - strand at 229.503 kb on - strand, within AZOBR_RS30635 at 229.508 kb on + strand, within AZOBR_RS30635 at 229.508 kb on + strand, within AZOBR_RS30635 at 229.508 kb on + strand, within AZOBR_RS30635 at 229.509 kb on - strand, within AZOBR_RS30635 at 229.509 kb on - strand, within AZOBR_RS30635 at 229.717 kb on + strand, within AZOBR_RS30640 at 229.717 kb on + strand, within AZOBR_RS30640 at 229.718 kb on - strand, within AZOBR_RS30640 at 229.754 kb on - strand, within AZOBR_RS30640 at 229.936 kb on + strand, within AZOBR_RS30640 at 229.936 kb on + strand, within AZOBR_RS30640 at 229.937 kb on - strand, within AZOBR_RS30640 at 229.937 kb on - strand, within AZOBR_RS30640 at 229.937 kb on - strand, within AZOBR_RS30640
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.145 mg/ml remove 227,213 + AZOBR_RS30625 0.34 +0.4 227,213 + AZOBR_RS30625 0.34 +0.2 227,213 + AZOBR_RS30625 0.34 +0.1 227,213 + AZOBR_RS30625 0.34 +0.5 227,213 + AZOBR_RS30625 0.34 -0.1 227,213 + AZOBR_RS30625 0.34 +0.2 227,213 + AZOBR_RS30625 0.34 -0.4 227,213 + AZOBR_RS30625 0.34 -0.5 227,213 + AZOBR_RS30625 0.34 +0.2 227,213 + AZOBR_RS30625 0.34 -0.8 227,213 + AZOBR_RS30625 0.34 -0.0 227,214 - AZOBR_RS30625 0.34 -0.6 227,214 - AZOBR_RS30625 0.34 +0.4 227,214 - AZOBR_RS30625 0.34 -0.5 227,214 - AZOBR_RS30625 0.34 -0.1 227,295 - AZOBR_RS30625 0.40 -0.0 227,366 + AZOBR_RS30625 0.46 +0.4 227,366 + AZOBR_RS30625 0.46 +0.1 227,367 - AZOBR_RS30625 0.46 -1.0 227,367 - AZOBR_RS30625 0.46 +0.2 228,122 + -0.0 229,162 - +0.4 229,162 - +0.0 229,503 - AZOBR_RS30635 0.63 -0.1 229,508 + AZOBR_RS30635 0.64 +0.2 229,508 + AZOBR_RS30635 0.64 +1.0 229,508 + AZOBR_RS30635 0.64 +0.1 229,509 - AZOBR_RS30635 0.64 -0.1 229,509 - AZOBR_RS30635 0.64 +0.4 229,717 + AZOBR_RS30640 0.10 +1.3 229,717 + AZOBR_RS30640 0.10 -0.1 229,718 - AZOBR_RS30640 0.10 -0.2 229,754 - AZOBR_RS30640 0.15 +0.3 229,936 + AZOBR_RS30640 0.39 -0.0 229,936 + AZOBR_RS30640 0.39 +0.0 229,937 - AZOBR_RS30640 0.39 +0.1 229,937 - AZOBR_RS30640 0.39 +0.8 229,937 - AZOBR_RS30640 0.39 +0.0
Or see this region's nucleotide sequence