Experiment: benzoic 0.145 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS11080 and AZOBR_RS11085 are separated by 116 nucleotides AZOBR_RS11085 and AZOBR_RS11090 are separated by 104 nucleotides
AZOBR_RS11080: AZOBR_RS11080 - ATPase AAA, at 2,331,448 to 2,332,293
_RS11080
AZOBR_RS11085: AZOBR_RS11085 - hypothetical protein, at 2,332,410 to 2,332,727
_RS11085
AZOBR_RS11090: AZOBR_RS11090 - alanyl-tRNA synthetase, at 2,332,832 to 2,335,501
_RS11090
Position (kb)
2331
2332
2333 Strain fitness (log2 ratio)
-2
-1
0
1 at 2330.460 kb on + strand at 2330.745 kb on + strand at 2331.270 kb on + strand at 2331.270 kb on + strand at 2331.271 kb on - strand at 2331.338 kb on - strand at 2331.427 kb on + strand at 2331.668 kb on + strand, within AZOBR_RS11080 at 2331.668 kb on + strand, within AZOBR_RS11080 at 2331.669 kb on - strand, within AZOBR_RS11080 at 2331.716 kb on + strand, within AZOBR_RS11080 at 2331.717 kb on - strand, within AZOBR_RS11080 at 2331.767 kb on + strand, within AZOBR_RS11080 at 2331.767 kb on + strand, within AZOBR_RS11080 at 2331.875 kb on + strand, within AZOBR_RS11080 at 2331.875 kb on + strand, within AZOBR_RS11080 at 2331.875 kb on + strand, within AZOBR_RS11080 at 2331.876 kb on - strand, within AZOBR_RS11080 at 2332.013 kb on + strand, within AZOBR_RS11080 at 2332.013 kb on + strand, within AZOBR_RS11080 at 2332.013 kb on + strand, within AZOBR_RS11080 at 2332.013 kb on + strand, within AZOBR_RS11080 at 2332.013 kb on + strand, within AZOBR_RS11080 at 2332.014 kb on - strand, within AZOBR_RS11080 at 2332.014 kb on - strand, within AZOBR_RS11080 at 2332.014 kb on - strand, within AZOBR_RS11080 at 2332.014 kb on - strand, within AZOBR_RS11080 at 2332.014 kb on - strand, within AZOBR_RS11080 at 2332.080 kb on - strand, within AZOBR_RS11080 at 2332.086 kb on - strand, within AZOBR_RS11080 at 2332.268 kb on + strand at 2332.268 kb on + strand at 2332.268 kb on + strand at 2332.268 kb on + strand at 2332.742 kb on + strand at 2332.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.145 mg/ml remove 2,330,460 + -0.9 2,330,745 + +0.4 2,331,270 + +0.5 2,331,270 + -0.5 2,331,271 - -1.0 2,331,338 - +0.2 2,331,427 + +0.0 2,331,668 + AZOBR_RS11080 0.26 -0.4 2,331,668 + AZOBR_RS11080 0.26 -0.1 2,331,669 - AZOBR_RS11080 0.26 +0.6 2,331,716 + AZOBR_RS11080 0.32 +0.1 2,331,717 - AZOBR_RS11080 0.32 +1.1 2,331,767 + AZOBR_RS11080 0.38 +0.0 2,331,767 + AZOBR_RS11080 0.38 +1.5 2,331,875 + AZOBR_RS11080 0.50 -2.2 2,331,875 + AZOBR_RS11080 0.50 +1.1 2,331,875 + AZOBR_RS11080 0.50 +0.4 2,331,876 - AZOBR_RS11080 0.51 -0.4 2,332,013 + AZOBR_RS11080 0.67 -0.0 2,332,013 + AZOBR_RS11080 0.67 +0.6 2,332,013 + AZOBR_RS11080 0.67 +0.2 2,332,013 + AZOBR_RS11080 0.67 +0.2 2,332,013 + AZOBR_RS11080 0.67 +1.1 2,332,014 - AZOBR_RS11080 0.67 +0.1 2,332,014 - AZOBR_RS11080 0.67 +0.2 2,332,014 - AZOBR_RS11080 0.67 -0.3 2,332,014 - AZOBR_RS11080 0.67 -0.3 2,332,014 - AZOBR_RS11080 0.67 +0.1 2,332,080 - AZOBR_RS11080 0.75 -0.4 2,332,086 - AZOBR_RS11080 0.75 +0.8 2,332,268 + +0.4 2,332,268 + +0.2 2,332,268 + +0.6 2,332,268 + +0.9 2,332,742 + -0.2 2,332,742 + -0.3
Or see this region's nucleotide sequence