Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20660

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
4,532,940	+				+0.3
4,532,941	-				+1.5
4,532,941	-				-0.2
4,532,941	-				+1.8
4,532,960	+				-0.1
4,532,961	-				+0.2
4,533,016	+				+0.2
4,533,016	+				+0.7
4,533,017	-				+0.2
4,533,017	-				-0.7
4,533,017	-				+2.4
4,533,017	-				+0.2
4,533,017	-				-0.1
4,533,017	-				-0.8
4,533,017	-				-1.3
4,533,034	+				-1.3
4,533,034	+				-0.3
4,533,035	-				-0.4
4,533,115	+		AO353_20655	0.15	+0.5
4,533,116	-		AO353_20655	0.15	-0.5
4,533,136	+		AO353_20655	0.18	+0.3
4,533,137	-		AO353_20655	0.18	-0.1
4,533,137	-		AO353_20655	0.18	-0.9
4,533,137	-		AO353_20655	0.18	+1.0
4,533,253	+		AO353_20655	0.36	-0.0
4,533,254	-		AO353_20655	0.36	+0.6
4,533,254	-		AO353_20655	0.36	-0.2
4,533,254	-		AO353_20655	0.36	+0.9
4,533,254	-		AO353_20655	0.36	-0.4
4,533,375	+		AO353_20655	0.55	-0.3
4,533,375	+		AO353_20655	0.55	-2.1
4,533,375	+		AO353_20655	0.55	+0.9
4,533,375	+		AO353_20655	0.55	+1.0
4,533,376	-		AO353_20655	0.55	-0.3
4,533,376	-		AO353_20655	0.55	-0.1
4,533,376	-		AO353_20655	0.55	-2.0
4,533,376	-		AO353_20655	0.55	+0.6
4,533,376	-		AO353_20655	0.55	+0.3
4,533,376	-		AO353_20655	0.55	+0.8
4,533,376	-		AO353_20655	0.55	-0.4
4,533,376	-		AO353_20655	0.55	+0.5
4,533,376	-		AO353_20655	0.55	+0.8
4,533,519	+		AO353_20655	0.76	-0.6
4,533,519	+		AO353_20655	0.76	+0.9
4,533,519	+		AO353_20655	0.76	-0.2
4,533,520	-		AO353_20655	0.77	-0.6
4,533,637	+				-0.5
4,533,637	+				-0.0
4,533,695	+				+0.1
4,533,696	-				-0.0
4,533,696	-				+0.8
4,533,707	+				+1.4
4,533,708	-				+0.8
4,533,716	-				+1.0
4,533,716	-				+1.2
4,533,719	+				-0.7
4,533,719	+				-1.0
4,533,719	+				-1.2
4,533,719	+				-0.4
4,533,719	+				+0.4
4,533,719	+				-2.0
4,533,719	+				+0.1
4,533,719	+				+0.8
4,533,719	+				-0.4
4,533,719	+				-0.8
4,533,719	+				-0.5
4,533,719	+				-0.6
4,533,719	+				-0.4
4,533,719	+				+1.7
4,533,719	+				-0.3
4,533,719	+				-1.4
4,533,719	+				-0.1
4,533,719	+				+1.8
4,533,719	+				-0.3
4,533,719	+				+0.6
4,533,720	-				+1.1
4,533,720	-				+0.5
4,533,720	-				+1.2
4,533,720	-				-0.2
4,533,720	-				-0.1
4,533,720	-				+1.0
4,533,720	-				-0.1
4,533,720	-				-0.5
4,533,720	-				+0.8
4,533,720	-				-0.2
4,533,720	-				-0.3
4,533,720	-				+1.2
4,533,720	-				-0.9
4,533,720	-				-1.5
4,533,720	-				-0.6
4,533,720	-				-0.9
4,533,720	-				+0.9
4,533,720	-				+0.4
4,533,720	-				+0.5
4,533,720	-				+0.1
4,533,720	-				-0.4
4,533,720	-				-0.2
4,533,720	-				+0.8
4,533,720	-				-0.8
4,533,720	-				-1.9
4,533,720	-				-0.3
4,533,720	-				+1.2
4,533,721	+				-3.0
4,533,722	-				-0.9
4,533,722	-				-0.6
4,533,723	+				-0.5
4,533,763	+				-0.3
4,533,817	+				-0.4
4,533,817	+				-1.3
4,533,817	+				-0.6
4,533,818	+				+1.1
4,533,818	-				+1.1
4,533,819	+				-0.8
4,533,819	+				-1.5
4,533,819	+				+0.7
4,533,819	+				+1.2
4,533,819	+				-0.8
4,533,819	+				+0.6
4,533,819	+				-0.3
4,533,819	+				-0.5
4,533,819	+				-0.8
4,533,819	+				-0.2
4,533,820	-				-0.9
4,533,820	-				+0.3
4,533,820	-				+0.8
4,533,820	-				-1.4
4,533,820	-				-1.2
4,533,820	-				+0.8
4,533,820	-				+0.2
4,533,820	-				-1.2
4,533,820	-				+1.0
4,533,820	-				-0.3
4,533,820	-				-0.5
4,533,820	-				-0.3
4,533,836	+				-0.9
4,533,836	+				+0.3
4,533,837	-				+1.1
4,533,837	-				-1.1
4,533,866	+				-0.7
4,533,866	+				+0.4
4,533,866	+				+0.5
4,533,867	-				-0.4
4,533,867	-				-1.0
4,533,867	-				+1.8
4,533,867	-				-1.4
4,533,868	+				-0.5
4,533,868	+				-2.1
4,533,868	+				+0.2
4,533,868	+				+0.5
4,533,868	+				-1.4
4,533,869	-				+0.3
4,533,869	-				-1.0
4,533,869	-				-1.2
4,533,869	-				-0.1
4,533,873	-				-1.2
4,533,873	-				-1.5
4,533,930	+				-2.5
4,533,931	-				-2.7
4,533,991	+		AO353_20660	0.12	-0.1
4,533,992	-		AO353_20660	0.13	-0.2
4,534,248	+		AO353_20660	0.44	-0.1
4,534,249	-		AO353_20660	0.44	-0.8
4,534,249	-		AO353_20660	0.44	-1.4
4,534,617	+		AO353_20660	0.88	-2.5
4,534,617	+		AO353_20660	0.88	-1.2
4,534,618	-		AO353_20660	0.88	-2.0
4,534,618	-		AO353_20660	0.88	-0.6
4,534,618	-		AO353_20660	0.88	-0.8
4,534,618	-		AO353_20660	0.88	-1.0
4,534,635	+				-1.5
4,534,665	+				-0.5
4,534,665	+				-0.5
4,534,665	+				+1.8
4,534,666	-				-0.5
4,534,666	-				-0.3
4,534,666	-				-0.5
4,534,666	-				-1.6
4,534,666	-				-0.6
4,534,872	+		AO353_20665	0.15	-3.1
4,534,872	+		AO353_20665	0.15	+0.5
4,534,872	+		AO353_20665	0.15	+0.1
4,534,872	+		AO353_20665	0.15	-1.7
4,534,872	+		AO353_20665	0.15	-1.2
4,534,873	-		AO353_20665	0.16	-0.5
4,534,873	-		AO353_20665	0.16	-3.1
4,534,873	-		AO353_20665	0.16	-2.1
4,534,873	-		AO353_20665	0.16	-3.0
4,535,062	-		AO353_20665	0.46	-2.2
4,535,073	+		AO353_20665	0.48	-1.4
4,535,073	+		AO353_20665	0.48	-1.9
4,535,073	+		AO353_20665	0.48	-1.5
4,535,073	+		AO353_20665	0.48	-3.5
4,535,073	+		AO353_20665	0.48	-2.0
4,535,073	+		AO353_20665	0.48	-3.1
4,535,073	+		AO353_20665	0.48	-1.2
4,535,074	-		AO353_20665	0.48	-2.8
4,535,074	-		AO353_20665	0.48	-2.0
4,535,074	-		AO353_20665	0.48	-1.2
4,535,074	-		AO353_20665	0.48	-1.8
4,535,074	-		AO353_20665	0.48	-1.0
4,535,077	+		AO353_20665	0.48	-2.5
4,535,077	+		AO353_20665	0.48	-2.3
4,535,077	+		AO353_20665	0.48	-2.8
4,535,077	+		AO353_20665	0.48	-2.5
4,535,077	+		AO353_20665	0.48	-1.2
4,535,077	+		AO353_20665	0.48	-3.9
4,535,077	+		AO353_20665	0.48	-1.7
4,535,078	-		AO353_20665	0.48	-0.8
4,535,078	-		AO353_20665	0.48	-1.5
4,535,160	-		AO353_20665	0.62	-2.2
4,535,160	-		AO353_20665	0.62	-3.4
4,535,160	-		AO353_20665	0.62	-1.7
4,535,163	+		AO353_20665	0.62	-1.0
4,535,163	+		AO353_20665	0.62	-2.2
4,535,163	+		AO353_20665	0.62	-2.3
4,535,163	+		AO353_20665	0.62	-3.5
4,535,163	+		AO353_20665	0.62	-1.5
4,535,163	+		AO353_20665	0.62	+0.8
4,535,163	+		AO353_20665	0.62	-2.9
4,535,163	+		AO353_20665	0.62	-3.2
4,535,163	+		AO353_20665	0.62	-4.2
4,535,164	-		AO353_20665	0.62	-2.3
4,535,164	-		AO353_20665	0.62	-2.4
4,535,164	-		AO353_20665	0.62	-2.7
4,535,164	-		AO353_20665	0.62	-2.0
4,535,164	-		AO353_20665	0.62	-3.8
4,535,164	-		AO353_20665	0.62	-2.9
4,535,164	-		AO353_20665	0.62	-3.4
4,535,164	-		AO353_20665	0.62	-1.5
4,535,164	-		AO353_20665	0.62	-1.9
4,535,164	-		AO353_20665	0.62	-4.4
4,535,326	+		AO353_20665	0.88	-1.7
4,535,374	+				-1.8
4,535,374	+				-0.8
4,535,374	+				-2.7
4,535,374	+				-2.1
4,535,390	+				-0.3
4,535,390	+				+0.2
4,535,397	+				+0.6
4,535,441	+				-1.1
4,535,454	+				+0.2
4,535,454	+				+0.1
4,535,454	+				+0.6
4,535,454	+				-0.3
4,535,454	+				-0.9
4,535,454	+				+0.5
4,535,454	+				-1.2