Strain Fitness in Pantoea sp. MT58 around IAI47_15620

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
3,293,367	+		IAI47_15615	0.65	-0.1
3,293,368	-		IAI47_15615	0.66	+0.4
3,293,368	-		IAI47_15615	0.66	-1.3
3,293,369	+		IAI47_15615	0.66	-0.6
3,293,369	+		IAI47_15615	0.66	-0.6
3,293,369	+		IAI47_15615	0.66	-0.1
3,293,369	+		IAI47_15615	0.66	-0.0
3,293,369	+		IAI47_15615	0.66	+0.9
3,293,369	+		IAI47_15615	0.66	-1.4
3,293,369	+		IAI47_15615	0.66	-0.5
3,293,369	+		IAI47_15615	0.66	+0.2
3,293,369	+		IAI47_15615	0.66	+0.1
3,293,370	-		IAI47_15615	0.66	-1.2
3,293,370	-		IAI47_15615	0.66	+0.6
3,293,370	-		IAI47_15615	0.66	+0.2
3,293,370	-		IAI47_15615	0.66	+0.1
3,293,370	-		IAI47_15615	0.66	-0.2
3,293,370	-		IAI47_15615	0.66	+0.5
3,293,370	-		IAI47_15615	0.66	-0.2
3,293,370	-		IAI47_15615	0.66	-0.1
3,293,385	+		IAI47_15615	0.66	-0.3
3,293,385	+		IAI47_15615	0.66	+0.7
3,293,385	+		IAI47_15615	0.66	+0.8
3,293,386	-		IAI47_15615	0.66	-2.5
3,293,445	+		IAI47_15615	0.69	+1.0
3,293,446	-		IAI47_15615	0.69	+0.5
3,293,507	+		IAI47_15615	0.71	-0.4
3,293,507	+		IAI47_15615	0.71	-0.0
3,293,531	+		IAI47_15615	0.72	-1.1
3,293,531	+		IAI47_15615	0.72	-0.5
3,293,531	+		IAI47_15615	0.72	+0.9
3,293,532	-		IAI47_15615	0.72	-0.3
3,293,534	-		IAI47_15615	0.72	-1.6
3,293,562	+		IAI47_15615	0.73	+0.2
3,293,562	+		IAI47_15615	0.73	+0.4
3,293,563	-		IAI47_15615	0.73	-0.6
3,293,751	+		IAI47_15615	0.81	-0.0
3,293,752	-		IAI47_15615	0.81	+0.5
3,293,846	+		IAI47_15615	0.84	-1.1
3,293,924	+		IAI47_15615	0.87	+0.4
3,293,924	+		IAI47_15615	0.87	+0.1
3,293,925	-		IAI47_15615	0.88	-0.4
3,293,925	-		IAI47_15615	0.88	+0.2
3,293,952	+		IAI47_15615	0.89	-0.2
3,293,953	-		IAI47_15615	0.89	+1.0
3,293,953	-		IAI47_15615	0.89	-1.2
3,293,961	+		IAI47_15615	0.89	+0.6
3,293,961	+		IAI47_15615	0.89	+0.5
3,293,962	-		IAI47_15615	0.89	-2.3
3,293,987	+				+0.3
3,293,987	+				+1.2
3,293,987	+				-2.5
3,293,987	+				+0.2
3,294,033	+				+0.1
3,294,033	+				-0.1
3,294,034	-				+0.6
3,294,034	-				+0.9
3,294,034	-				-2.0
3,294,034	-				+0.9
3,294,037	+				-0.2
3,294,037	+				+0.0
3,294,037	+				+0.2
3,294,038	-				-0.3
3,294,038	-				-0.0
3,294,084	+				+0.6
3,294,085	-				+0.6
3,294,085	-				-1.1
3,294,085	-				+1.7
3,294,085	-				+0.2
3,294,090	+				-0.0
3,294,091	-				+0.1
3,294,141	+				+0.4
3,294,153	+				+0.5
3,294,201	+				-0.1
3,294,201	+				+0.4
3,294,202	-				+0.1
3,294,202	-				-0.0
3,294,215	-				+0.2
3,294,279	+				+2.0
3,294,279	+				-1.0
3,294,279	+				-0.7
3,294,279	+				+1.2
3,294,280	-				-0.2
3,294,284	+				-0.2
3,294,284	+				+0.8
3,294,285	-				+0.7
3,294,285	-				-0.1
3,294,413	+				-0.1
3,294,413	+				-0.5
3,294,413	+				+1.0
3,294,414	-				+0.2
3,294,414	-				+0.2
3,294,414	-				-0.1
3,294,414	-				-1.2
3,294,536	+				+2.3
3,294,537	-				-0.3
3,294,537	-				+0.5
3,294,537	-				-1.6
3,294,537	-				+1.8
3,294,658	+		IAI47_15620	0.13	-0.3
3,294,658	+		IAI47_15620	0.13	+0.7
3,294,658	+		IAI47_15620	0.13	-0.5
3,294,658	+		IAI47_15620	0.13	-0.4
3,294,658	+		IAI47_15620	0.13	-0.1
3,294,658	+		IAI47_15620	0.13	-0.4
3,294,659	-		IAI47_15620	0.13	-0.9
3,294,659	-		IAI47_15620	0.13	-0.1
3,294,659	-		IAI47_15620	0.13	+0.6
3,294,659	-		IAI47_15620	0.13	+1.1
3,294,659	-		IAI47_15620	0.13	+0.6
3,294,659	-		IAI47_15620	0.13	-1.5
3,294,659	-		IAI47_15620	0.13	-3.3
3,294,677	+		IAI47_15620	0.14	-1.5
3,294,677	+		IAI47_15620	0.14	-0.1
3,294,677	+		IAI47_15620	0.14	+0.6
3,294,708	+		IAI47_15620	0.15	+0.6
3,294,708	+		IAI47_15620	0.15	+1.7
3,294,708	+		IAI47_15620	0.15	-0.8
3,294,709	-		IAI47_15620	0.15	+0.2
3,294,709	-		IAI47_15620	0.15	+0.8
3,294,709	-		IAI47_15620	0.15	+0.8
3,294,709	-		IAI47_15620	0.15	+0.4
3,294,803	+		IAI47_15620	0.19	-0.8
3,294,803	+		IAI47_15620	0.19	+0.4
3,294,803	+		IAI47_15620	0.19	-1.5
3,294,803	+		IAI47_15620	0.19	-0.5
3,294,804	-		IAI47_15620	0.19	+1.4
3,294,804	-		IAI47_15620	0.19	+0.8
3,294,804	-		IAI47_15620	0.19	-0.5
3,294,804	-		IAI47_15620	0.19	-0.2
3,294,804	-		IAI47_15620	0.19	+0.6
3,294,994	+		IAI47_15620	0.26	+1.1
3,295,154	+		IAI47_15620	0.33	+0.2
3,295,164	+		IAI47_15620	0.33	+0.9
3,295,164	+		IAI47_15620	0.33	+1.7
3,295,167	+		IAI47_15620	0.33	+0.5
3,295,168	-		IAI47_15620	0.33	-1.5
3,295,168	-		IAI47_15620	0.33	+1.4
3,295,309	+		IAI47_15620	0.39	+0.5
3,295,434	-		IAI47_15620	0.44	-0.4
3,295,514	+		IAI47_15620	0.47	+0.3
3,295,514	+		IAI47_15620	0.47	-0.1
3,295,514	+		IAI47_15620	0.47	+0.7
3,295,514	+		IAI47_15620	0.47	+0.1
3,295,514	+		IAI47_15620	0.47	+0.3
3,295,514	+		IAI47_15620	0.47	+0.4
3,295,515	-		IAI47_15620	0.47	+0.9
3,295,515	-		IAI47_15620	0.47	+0.5
3,295,515	-		IAI47_15620	0.47	+0.0
3,295,515	-		IAI47_15620	0.47	+2.0
3,295,659	+		IAI47_15620	0.53	+0.9
3,295,659	+		IAI47_15620	0.53	+1.1
3,295,659	+		IAI47_15620	0.53	-0.9
3,295,659	+		IAI47_15620	0.53	+1.9
3,295,660	-		IAI47_15620	0.53	+0.7
3,295,660	-		IAI47_15620	0.53	+0.5
3,295,660	-		IAI47_15620	0.53	-0.8
3,295,660	-		IAI47_15620	0.53	+0.4
3,295,660	-		IAI47_15620	0.53	+0.3
3,295,660	-		IAI47_15620	0.53	-0.3
3,295,660	-		IAI47_15620	0.53	+0.8
3,295,660	-		IAI47_15620	0.53	-0.5
3,295,660	-		IAI47_15620	0.53	-0.5
3,295,776	+		IAI47_15620	0.58	+0.2
3,295,777	-		IAI47_15620	0.58	-0.8
3,296,010	+		IAI47_15620	0.67	+0.7
3,296,010	+		IAI47_15620	0.67	-0.0
3,296,011	-		IAI47_15620	0.67	-0.5
3,296,047	+		IAI47_15620	0.69	+0.7
3,296,048	-		IAI47_15620	0.69	-0.1
3,296,048	-		IAI47_15620	0.69	+1.4
3,296,048	-		IAI47_15620	0.69	+0.8
3,296,048	-		IAI47_15620	0.69	-1.6
3,296,242	+		IAI47_15620	0.77	+1.2
3,296,243	-		IAI47_15620	0.77	+1.3
3,296,303	+		IAI47_15620	0.79	+0.4
3,296,333	+		IAI47_15620	0.80	-0.0
3,296,598	-				+0.1
3,296,598	-				-1.1
3,296,627	+				-0.3
3,296,627	+				-0.2
3,296,627	+				-1.1
3,296,627	+				-0.1
3,296,628	-				+1.3
3,296,628	-				+1.2
3,296,628	-				+2.1
3,296,628	-				-0.3
3,296,658	+				-0.4
3,296,658	+				-1.2
3,296,658	+				-0.4
3,296,658	+				+0.5
3,296,658	+				-1.2
3,296,658	+				-1.3
3,296,658	+				+0.8
3,296,658	+				+0.7
3,296,659	-				-0.8
3,296,659	-				+0.7
3,296,659	-				-0.1
3,296,659	-				+0.3
3,296,661	+				-0.4
3,296,661	+				-0.2
3,296,661	+				+0.4
3,296,661	+				+0.9
3,296,661	+				+1.2
3,296,662	-				+0.5
3,296,662	-				+0.8
3,296,662	-				+0.3
3,296,662	-				-0.2
3,296,772	+				-0.5
3,296,773	-				-0.0
3,296,808	+				-0.0
3,296,808	+				-0.4
3,296,808	+				-0.8
3,296,809	-				+0.7
3,296,809	-				-1.5
3,296,809	-				+0.3
3,296,809	-				-0.0
3,296,809	-				+1.3
3,296,809	-				-0.3
3,296,825	+				-0.8
3,296,825	+				-1.7
3,296,825	+				-0.0
3,296,826	-				+0.1
3,296,826	-				+0.1
3,296,835	+				+1.2
3,296,836	-				-0.3
3,296,836	-				-0.2
3,296,836	-				+0.4
3,296,869	+				+1.5
3,296,870	-				-1.1
3,297,195	+		IAI47_15625	0.61	+0.9
3,297,196	-		IAI47_15625	0.61	+1.1
3,297,196	-		IAI47_15625	0.61	+0.4
3,297,196	-		IAI47_15625	0.61	-0.4
3,297,196	-		IAI47_15625	0.61	+1.2
3,297,224	+		IAI47_15625	0.66	-1.5
3,297,224	+		IAI47_15625	0.66	-1.0
3,297,224	+		IAI47_15625	0.66	-0.4
3,297,224	+		IAI47_15625	0.66	-0.6
3,297,225	-		IAI47_15625	0.67	+0.9
3,297,225	-		IAI47_15625	0.67	+0.1
3,297,225	-		IAI47_15625	0.67	-2.3
3,297,225	-		IAI47_15625	0.67	-0.3
3,297,225	-		IAI47_15625	0.67	-1.8
3,297,225	-		IAI47_15625	0.67	+1.4
3,297,225	-		IAI47_15625	0.67	-0.3
3,297,235	+		IAI47_15625	0.68	-0.4
3,297,235	+		IAI47_15625	0.68	+0.2
3,297,325	-		IAI47_15625	0.85	-0.7
3,297,408	+				+0.3
3,297,408	+				+0.4
3,297,409	-				+0.7
3,297,434	-				+0.5
3,297,456	+				-1.0
3,297,456	+				+0.5
3,297,456	+				-0.8
3,297,456	+				+1.3
3,297,456	+				+1.0
3,297,456	+				-0.4
3,297,457	-				+0.5
3,297,457	-				-0.2
3,297,457	-				+0.4
3,297,457	-				+0.0
3,297,522	+		IAI47_15630	0.19	-0.2
3,297,523	-		IAI47_15630	0.19	+0.3
3,297,545	-		IAI47_15630	0.22	-1.5
3,297,575	-		IAI47_15630	0.27	-0.4
3,297,630	+		IAI47_15630	0.34	+1.4
3,297,631	-		IAI47_15630	0.34	+0.3
3,297,631	-		IAI47_15630	0.34	-1.1
3,297,720	-		IAI47_15630	0.47	-0.4
3,297,720	-		IAI47_15630	0.47	-0.2
3,297,784	+		IAI47_15630	0.56	+0.3
3,297,784	+		IAI47_15630	0.56	-0.5
3,297,784	+		IAI47_15630	0.56	-0.6
3,297,785	-		IAI47_15630	0.56	-0.5
3,297,785	-		IAI47_15630	0.56	+1.1
3,297,785	-		IAI47_15630	0.56	-2.1
3,297,786	+		IAI47_15630	0.56	-0.4
3,297,786	+		IAI47_15630	0.56	+1.0
3,297,786	+		IAI47_15630	0.56	+0.8
3,297,786	+		IAI47_15630	0.56	-1.8
3,297,786	+		IAI47_15630	0.56	-0.2
3,297,786	+		IAI47_15630	0.56	+0.5
3,297,787	-		IAI47_15630	0.57	+1.2