Experiment: Defined media control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_12850 and IAI47_12855 are separated by 108 nucleotides IAI47_12855 and IAI47_12860 are separated by 200 nucleotides
IAI47_12850: IAI47_12850 - 30S ribosomal protein S1, at 2,710,876 to 2,712,549
_12850
IAI47_12855: IAI47_12855 - (d)CMP kinase, at 2,712,658 to 2,713,344
_12855
IAI47_12860: IAI47_12860 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,713,545 to 2,714,831
_12860
Position (kb)
2712
2713
2714 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2712.640 kb on - strand at 2712.650 kb on - strand at 2712.650 kb on - strand at 2712.660 kb on - strand at 2712.670 kb on - strand at 2713.391 kb on - strand at 2713.405 kb on + strand at 2713.405 kb on + strand at 2713.406 kb on - strand at 2713.406 kb on - strand at 2713.406 kb on - strand at 2713.406 kb on - strand at 2713.406 kb on - strand at 2713.406 kb on - strand at 2713.406 kb on - strand at 2713.414 kb on + strand at 2713.459 kb on + strand at 2713.459 kb on + strand at 2713.463 kb on + strand at 2713.463 kb on + strand at 2713.463 kb on + strand at 2713.464 kb on - strand at 2713.543 kb on + strand at 2713.543 kb on + strand at 2713.543 kb on + strand at 2713.543 kb on + strand at 2713.543 kb on + strand at 2713.543 kb on + strand at 2713.543 kb on + strand at 2713.544 kb on - strand at 2713.544 kb on - strand at 2713.544 kb on - strand at 2713.544 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined media control, aerobic remove 2,712,640 - +2.5 2,712,650 - +0.2 2,712,650 - -0.4 2,712,660 - +0.4 2,712,670 - -0.3 2,713,391 - +1.0 2,713,405 + +1.5 2,713,405 + +1.2 2,713,406 - +2.1 2,713,406 - +0.1 2,713,406 - +1.4 2,713,406 - +0.6 2,713,406 - -0.7 2,713,406 - +1.1 2,713,406 - +0.3 2,713,414 + +0.5 2,713,459 + +0.2 2,713,459 + -0.7 2,713,463 + -0.1 2,713,463 + -0.2 2,713,463 + -1.3 2,713,464 - +2.0 2,713,543 + -0.7 2,713,543 + +0.0 2,713,543 + -1.5 2,713,543 + -0.2 2,713,543 + +0.7 2,713,543 + +0.6 2,713,543 + -0.3 2,713,544 - -0.8 2,713,544 - -0.3 2,713,544 - +0.7 2,713,544 - -2.1
Or see this region's nucleotide sequence