Strain Fitness in Pantoea sp. MT58 around IAI47_09725

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
2,057,026	+				+1.7
2,057,027	-				+0.6
2,057,064	+				+0.1
2,057,065	-				+0.2
2,057,065	-				-0.4
2,057,071	+				-0.2
2,057,072	-				-0.3
2,057,116	+				-0.6
2,057,116	+				-1.4
2,057,117	-				-2.1
2,057,122	+				+0.2
2,057,122	+				-0.3
2,057,122	+				-0.9
2,057,123	-				+0.0
2,057,123	-				-3.2
2,057,123	-				-0.6
2,057,123	-				+0.5
2,057,123	-				-1.3
2,057,125	+				-1.5
2,057,125	+				-1.3
2,057,125	+				+0.4
2,057,125	+				-0.6
2,057,125	+				-0.9
2,057,126	-				-0.6
2,057,126	-				-1.1
2,057,126	-				-0.4
2,057,126	-				-1.6
2,057,126	-				+0.4
2,057,128	+		IAI47_09720	0.10	+0.0
2,057,129	-		IAI47_09720	0.10	-1.6
2,057,129	-		IAI47_09720	0.10	+0.7
2,057,129	-		IAI47_09720	0.10	-1.1
2,057,129	-		IAI47_09720	0.10	-0.5
2,057,129	-		IAI47_09720	0.10	+0.7
2,057,185	+		IAI47_09720	0.19	+1.3
2,057,185	+		IAI47_09720	0.19	-1.2
2,057,185	+		IAI47_09720	0.19	+0.8
2,057,186	-		IAI47_09720	0.19	-0.2
2,057,186	-		IAI47_09720	0.19	-1.7
2,057,186	-		IAI47_09720	0.19	-0.5
2,057,186	-		IAI47_09720	0.19	+0.2
2,057,186	-		IAI47_09720	0.19	-0.2
2,057,186	-		IAI47_09720	0.19	-2.2
2,057,271	-		IAI47_09720	0.32	-0.9
2,057,271	-		IAI47_09720	0.32	-1.1
2,057,271	-		IAI47_09720	0.32	-0.4
2,057,273	+		IAI47_09720	0.32	-3.2
2,057,274	-		IAI47_09720	0.32	-0.3
2,057,274	-		IAI47_09720	0.32	-0.2
2,057,274	-		IAI47_09720	0.32	-0.0
2,057,274	-		IAI47_09720	0.32	-1.1
2,057,274	-		IAI47_09720	0.32	-1.3
2,057,274	-		IAI47_09720	0.32	-0.1
2,057,274	-		IAI47_09720	0.32	+1.1
2,057,274	-		IAI47_09720	0.32	-2.1
2,057,309	-		IAI47_09720	0.38	-0.9
2,057,356	+		IAI47_09720	0.45	+0.0
2,057,357	-		IAI47_09720	0.45	+0.3
2,057,357	-		IAI47_09720	0.45	+1.1
2,057,357	-		IAI47_09720	0.45	-0.1
2,057,389	+		IAI47_09720	0.50	+0.3
2,057,390	-		IAI47_09720	0.50	-2.5
2,057,390	-		IAI47_09720	0.50	-0.9
2,057,415	+		IAI47_09720	0.54	-1.3
2,057,415	+		IAI47_09720	0.54	-1.2
2,057,446	+		IAI47_09720	0.59	-0.8
2,057,447	-		IAI47_09720	0.59	-0.6
2,057,447	-		IAI47_09720	0.59	-0.5
2,057,447	-		IAI47_09720	0.59	-3.0
2,057,447	-		IAI47_09720	0.59	-0.4
2,057,447	-		IAI47_09720	0.59	-2.0
2,057,457	-		IAI47_09720	0.61	-0.7
2,057,489	+		IAI47_09720	0.65	-0.7
2,057,489	+		IAI47_09720	0.65	-0.2
2,057,490	-		IAI47_09720	0.66	-1.5
2,057,490	-		IAI47_09720	0.66	-0.6
2,057,490	-		IAI47_09720	0.66	-0.8
2,057,490	-		IAI47_09720	0.66	-0.7
2,057,490	-		IAI47_09720	0.66	+0.8
2,057,491	+		IAI47_09720	0.66	+1.6
2,057,491	+		IAI47_09720	0.66	-0.8
2,057,492	-		IAI47_09720	0.66	+0.8
2,057,492	-		IAI47_09720	0.66	+0.0
2,057,492	-		IAI47_09720	0.66	+0.1
2,057,492	-		IAI47_09720	0.66	+0.8
2,057,492	-		IAI47_09720	0.66	+0.5
2,057,492	-		IAI47_09720	0.66	-0.6
2,057,493	+		IAI47_09720	0.66	-0.8
2,057,493	+		IAI47_09720	0.66	-1.1
2,057,493	+		IAI47_09720	0.66	+0.4
2,057,494	-		IAI47_09720	0.66	+0.8
2,057,494	-		IAI47_09720	0.66	-2.0
2,057,494	-		IAI47_09720	0.66	-0.7
2,057,494	-		IAI47_09720	0.66	-0.2
2,057,522	+		IAI47_09720	0.71	+3.5
2,057,527	+		IAI47_09720	0.71	-0.1
2,057,528	-		IAI47_09720	0.71	-0.1
2,057,528	-		IAI47_09720	0.71	-0.7
2,057,528	-		IAI47_09720	0.71	-0.1
2,057,605	-		IAI47_09720	0.83	+0.1
2,057,635	+		IAI47_09720	0.88	-2.4
2,057,665	+				+2.1
2,057,665	+				-1.3
2,057,666	-				+0.3
2,057,666	-				-1.5
2,057,666	-				-2.1
2,057,688	-				-1.7
2,057,688	-				-1.0
2,057,713	+				-1.2
2,057,713	+				+0.3
2,057,713	+				-0.6
2,057,713	+				+1.1
2,057,713	+				+0.9
2,057,713	+				-0.7
2,057,713	+				-0.3
2,057,714	-				-0.6
2,057,714	-				+0.3
2,057,714	-				+0.5
2,057,714	-				-1.2
2,057,714	-				-1.5
2,057,714	-				+0.9
2,057,714	-				-0.5
2,057,714	-				-1.6
2,057,740	+				-1.4
2,057,780	+				+0.3
2,057,837	+				-0.5
2,057,838	-				+0.8
2,057,843	+				-0.3
2,057,843	+				+1.6
2,057,843	+				-0.3
2,057,843	+				-0.7
2,057,844	-				+0.2
2,057,844	-				-0.4
2,057,844	-				+1.0
2,057,869	+				-0.5
2,057,939	-				+1.1
2,057,942	-				+0.3
2,057,978	+				+0.3
2,057,979	-				-0.9
2,057,979	-				-0.4
2,057,979	-				-0.7
2,058,003	-				-0.2
2,058,060	+		IAI47_09725	0.15	+0.5
2,058,061	-		IAI47_09725	0.15	-1.3
2,058,061	-		IAI47_09725	0.15	+2.1
2,058,061	-		IAI47_09725	0.15	-0.6
2,058,061	-		IAI47_09725	0.15	-0.5
2,058,061	-		IAI47_09725	0.15	+0.7
2,058,082	+		IAI47_09725	0.23	+2.1
2,058,083	-		IAI47_09725	0.24	-0.0
2,058,083	-		IAI47_09725	0.24	-1.1
2,058,083	-		IAI47_09725	0.24	-0.1
2,058,083	-		IAI47_09725	0.24	-0.7
2,058,083	-		IAI47_09725	0.24	+0.4
2,058,083	-		IAI47_09725	0.24	+0.5
2,058,083	-		IAI47_09725	0.24	+0.5
2,058,083	-		IAI47_09725	0.24	-1.1
2,058,083	-		IAI47_09725	0.24	-0.3
2,058,114	+		IAI47_09725	0.36	-1.3
2,058,144	-		IAI47_09725	0.47	-1.1
2,058,144	-		IAI47_09725	0.47	-0.2
2,058,144	-		IAI47_09725	0.47	+0.3
2,058,156	+		IAI47_09725	0.52	+0.2
2,058,156	+		IAI47_09725	0.52	-0.9
2,058,157	-		IAI47_09725	0.52	-0.6
2,058,189	+		IAI47_09725	0.65	-0.3
2,058,271	+				-0.1
2,058,271	+				-0.3
2,058,271	+				+1.0
2,058,272	-				-0.5
2,058,272	-				-0.4
2,058,317	-				+0.7
2,058,325	+				+1.1
2,058,325	+				-1.0
2,058,325	+				+0.1
2,058,325	+				+1.4
2,058,326	-				-1.3
2,058,326	-				+0.8
2,058,326	-				-1.0
2,058,328	+				-0.6
2,058,328	+				+0.6
2,058,328	+				+0.5
2,058,329	-				-1.4
2,058,354	+		IAI47_09730	0.14	+0.5
2,058,354	+		IAI47_09730	0.14	-0.9
2,058,354	+		IAI47_09730	0.14	+0.4
2,058,354	+		IAI47_09730	0.14	-0.4
2,058,355	-		IAI47_09730	0.15	-0.3
2,058,400	+		IAI47_09730	0.32	-0.5
2,058,400	+		IAI47_09730	0.32	-0.5
2,058,400	+		IAI47_09730	0.32	-0.3
2,058,400	+		IAI47_09730	0.32	-0.2
2,058,400	+		IAI47_09730	0.32	+1.7
2,058,400	+		IAI47_09730	0.32	+1.0
2,058,400	+		IAI47_09730	0.32	+0.1
2,058,401	-		IAI47_09730	0.33	-0.6
2,058,401	-		IAI47_09730	0.33	-0.3
2,058,401	-		IAI47_09730	0.33	-1.5
2,058,449	-		IAI47_09730	0.51	-0.6
2,058,451	+		IAI47_09730	0.52	-2.7
2,058,451	+		IAI47_09730	0.52	+1.0
2,058,451	+		IAI47_09730	0.52	-0.3
2,058,451	+		IAI47_09730	0.52	-0.3
2,058,452	-		IAI47_09730	0.52	+0.3
2,058,452	-		IAI47_09730	0.52	-0.3
2,058,452	-		IAI47_09730	0.52	-1.6
2,058,452	-		IAI47_09730	0.52	+1.4
2,058,452	-		IAI47_09730	0.52	+0.1
2,058,452	-		IAI47_09730	0.52	-1.5
2,058,566	+				+0.2
2,058,566	+				-1.5
2,058,566	+				-0.6
2,058,566	+				-0.4
2,058,567	-				+0.6
2,058,567	-				-0.3
2,058,567	-				+1.2
2,058,568	+				+0.5
2,058,569	-				+0.1
2,058,569	-				+0.4
2,058,569	-				+1.2
2,058,572	+				-1.9
2,058,572	+				+1.7
2,058,572	+				-0.8
2,058,573	-				+1.0
2,058,573	-				-0.0
2,058,583	+				-1.8
2,058,583	+				+1.3
2,058,583	+				-1.6
2,058,583	+				-0.3
2,058,587	+				-0.7
2,058,587	+				+0.5
2,058,587	+				+0.5
2,058,587	+				+0.8
2,058,587	+				-0.8
2,058,588	-				-2.7
2,058,588	-				+0.6
2,058,588	-				+0.0
2,058,593	+				-0.1
2,058,608	+				-0.1
2,058,609	-				+0.6
2,058,618	+				+0.3
2,058,618	+				-1.5
2,058,619	-				-0.8
2,058,619	-				+1.3
2,058,619	-				+0.2
2,058,619	-				-0.7
2,058,634	+				+0.2
2,058,692	+				-2.9
2,058,692	+				-0.1
2,058,692	+				-1.2
2,058,693	-				-0.5
2,058,693	-				+0.3
2,058,696	+				+0.2
2,058,696	+				-1.0
2,058,696	+				+3.0
2,058,697	-				-0.9
2,058,697	-				+0.6
2,058,697	-				-0.9
2,058,707	-				+0.3
2,058,807	+		IAI47_09735	0.13	-0.0
2,058,807	+		IAI47_09735	0.13	-1.3
2,058,808	-		IAI47_09735	0.13	+0.2
2,058,810	+		IAI47_09735	0.13	+0.2
2,058,810	+		IAI47_09735	0.13	+0.9
2,058,811	-		IAI47_09735	0.13	+0.2
2,058,811	-		IAI47_09735	0.13	+0.6
2,058,811	-		IAI47_09735	0.13	+0.3
2,058,811	-		IAI47_09735	0.13	-0.3
2,058,812	+		IAI47_09735	0.14	-2.5
2,058,812	+		IAI47_09735	0.14	+0.7
2,058,812	+		IAI47_09735	0.14	-0.0
2,058,812	+		IAI47_09735	0.14	+0.4
2,058,812	+		IAI47_09735	0.14	-0.5
2,058,812	+		IAI47_09735	0.14	+0.4
2,058,813	-		IAI47_09735	0.14	-0.1
2,058,813	-		IAI47_09735	0.14	+1.5
2,058,813	-		IAI47_09735	0.14	+1.1
2,058,813	-		IAI47_09735	0.14	-0.1
2,058,813	-		IAI47_09735	0.14	+0.0
2,058,882	+		IAI47_09735	0.19	+0.1
2,058,883	-		IAI47_09735	0.19	-0.6
2,058,883	-		IAI47_09735	0.19	-1.3
2,058,975	+		IAI47_09735	0.27	+0.5
2,058,975	+		IAI47_09735	0.27	-0.1
2,058,976	-		IAI47_09735	0.27	+0.9
2,058,976	-		IAI47_09735	0.27	+0.6
2,059,006	-		IAI47_09735	0.30	-0.4
2,059,006	-		IAI47_09735	0.30	+2.1
2,059,026	+		IAI47_09735	0.32	+0.0
2,059,027	-		IAI47_09735	0.32	+0.4
2,059,027	-		IAI47_09735	0.32	+1.1
2,059,131	+		IAI47_09735	0.40	+0.1
2,059,131	+		IAI47_09735	0.40	-0.1
2,059,132	-		IAI47_09735	0.41	-0.1
2,059,145	+		IAI47_09735	0.42	-0.9
2,059,145	+		IAI47_09735	0.42	-0.1
2,059,145	+		IAI47_09735	0.42	+0.1
2,059,145	+		IAI47_09735	0.42	+0.7
2,059,145	+		IAI47_09735	0.42	+0.1
2,059,145	+		IAI47_09735	0.42	-1.0
2,059,145	+		IAI47_09735	0.42	-0.1
2,059,146	-		IAI47_09735	0.42	-1.5
2,059,146	-		IAI47_09735	0.42	+2.1
2,059,146	-		IAI47_09735	0.42	-0.2
2,059,146	-		IAI47_09735	0.42	-0.6
2,059,146	-		IAI47_09735	0.42	-1.0
2,059,146	-		IAI47_09735	0.42	+0.6
2,059,146	-		IAI47_09735	0.42	-0.2
2,059,146	-		IAI47_09735	0.42	+2.7
2,059,146	-		IAI47_09735	0.42	+0.3
2,059,146	-		IAI47_09735	0.42	+1.6
2,059,146	-		IAI47_09735	0.42	+0.8
2,059,146	-		IAI47_09735	0.42	+1.6
2,059,151	+		IAI47_09735	0.42	-0.3
2,059,151	+		IAI47_09735	0.42	+1.0
2,059,151	+		IAI47_09735	0.42	-0.3
2,059,152	-		IAI47_09735	0.42	+0.5
2,059,160	+		IAI47_09735	0.43	-0.0
2,059,160	+		IAI47_09735	0.43	+0.7
2,059,193	+		IAI47_09735	0.46	-0.3
2,059,193	+		IAI47_09735	0.46	-1.3
2,059,193	+		IAI47_09735	0.46	+0.2
2,059,193	+		IAI47_09735	0.46	+0.2
2,059,194	-		IAI47_09735	0.46	+0.1
2,059,194	-		IAI47_09735	0.46	-1.3
2,059,194	-		IAI47_09735	0.46	+0.1
2,059,194	-		IAI47_09735	0.46	-1.1
2,059,194	-		IAI47_09735	0.46	-0.4
2,059,194	-		IAI47_09735	0.46	+1.9
2,059,194	-		IAI47_09735	0.46	+0.9
2,059,251	+		IAI47_09735	0.51	-0.3
2,059,251	+		IAI47_09735	0.51	+0.3